RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 TACO1Q9BSH4 297 aaKnown RBP15.84■□□□□ 0.13
TRAF1-201ENST00000373887 LRWD1Q9UFC0 647 aa15.84■□□□□ 0.13
TRAF1-201ENST00000373887 GCNT3O95395 438 aa15.84■□□□□ 0.13
TRAF1-201ENST00000373887 PLCD1P51178 756 aa15.84■□□□□ 0.13
TRAF1-201ENST00000373887 CARD6Q9BX69 1037 aa15.84■□□□□ 0.13
TRAF1-201ENST00000373887 E7EWF7 191 aa15.84■□□□□ 0.13
TRAF1-201ENST00000373887 FLOT1O75955 427 aa15.84■□□□□ 0.13
TRAF1-201ENST00000373887 BSPRYQ5W0U4 402 aa15.84■□□□□ 0.13
TRAF1-201ENST00000373887 RILPQ96NA2 401 aa15.84■□□□□ 0.13
TRAF1-201ENST00000373887 VCXQ9H320 206 aa15.84■□□□□ 0.13
TRAF1-201ENST00000373887 BLZF1Q9H2G9 400 aa15.83■□□□□ 0.13
TRAF1-201ENST00000373887 KDRP35968 1356 aa15.83■□□□□ 0.13
TRAF1-201ENST00000373887 NLRP1Q9C000 1473 aa15.83■□□□□ 0.13
TRAF1-201ENST00000373887 CALUO43852 315 aaPredicted RBP15.83■□□□□ 0.13
TRAF1-201ENST00000373887 ANKRD35Q8N283 1001 aa15.83■□□□□ 0.13
TRAF1-201ENST00000373887 IBTKQ9P2D0 1353 aaPredicted RBP15.83■□□□□ 0.13
TRAF1-201ENST00000373887 ARPP21Q9UBL0 812 aaPredicted RBP15.83■□□□□ 0.13
TRAF1-201ENST00000373887 SMCO2A6NFE2 343 aa15.83■□□□□ 0.12
TRAF1-201ENST00000373887 CEP104O60308 925 aa15.83■□□□□ 0.12
TRAF1-201ENST00000373887 IFT20Q8IY31 132 aa15.83■□□□□ 0.12
TRAF1-201ENST00000373887 JAK2O60674 1132 aa15.83■□□□□ 0.12
TRAF1-201ENST00000373887 DNM2P50570 870 aa15.83■□□□□ 0.12
TRAF1-201ENST00000373887 ANO1Q5XXA6 986 aa15.83■□□□□ 0.12
TRAF1-201ENST00000373887 CARD10Q9BWT7 1032 aa15.83■□□□□ 0.12
TRAF1-201ENST00000373887 KRT15P19012 456 aa15.83■□□□□ 0.12
TRAF1-201ENST00000373887 MYO1AQ9UBC5 1043 aa15.83■□□□□ 0.12
TRAF1-201ENST00000373887 TBC1D8O95759 1140 aa15.82■□□□□ 0.12
TRAF1-201ENST00000373887 ELF2Q15723 593 aa15.82■□□□□ 0.12
TRAF1-201ENST00000373887 FAM102BQ5T8I3 360 aa15.82■□□□□ 0.12
TRAF1-201ENST00000373887 TAOK1Q7L7X3 1001 aa15.82■□□□□ 0.12
TRAF1-201ENST00000373887 UNC5CLQ8IV45 518 aa15.82■□□□□ 0.12
TRAF1-201ENST00000373887 GPKOWQ92917 476 aaPredicted RBP eCLIP15.82■□□□□ 0.12
TRAF1-201ENST00000373887 CTTNBP2NLQ9P2B4 639 aa15.82■□□□□ 0.12
TRAF1-201ENST00000373887 PPME1Q9Y570 386 aa15.82■□□□□ 0.12
TRAF1-201ENST00000373887 PHKA1P46020 1223 aa15.82■□□□□ 0.12
TRAF1-201ENST00000373887 UBXN2AP68543 259 aa15.82■□□□□ 0.12
TRAF1-201ENST00000373887 CEP128Q6ZU80 1094 aa15.82■□□□□ 0.12
TRAF1-201ENST00000373887 ANKRD42Q8N9B4 389 aa15.82■□□□□ 0.12
TRAF1-201ENST00000373887 SECISBP2LQ93073 1101 aaKnown RBP15.82■□□□□ 0.12
TRAF1-201ENST00000373887 MRPL44Q9H9J2 332 aaKnown RBP15.82■□□□□ 0.12
TRAF1-201ENST00000373887 CACYBPQ9HB71 228 aaKnown RBP15.82■□□□□ 0.12
TRAF1-201ENST00000373887 THRAP3Q9Y2W1 955 aaKnown RBP15.82■□□□□ 0.12
TRAF1-201ENST00000373887 WDR46O15213 610 aaKnown RBP15.82■□□□□ 0.12
TRAF1-201ENST00000373887 PRR16Q569H4 304 aa15.82■□□□□ 0.12
TRAF1-201ENST00000373887 RILPL1Q5EBL4 403 aa15.82■□□□□ 0.12
TRAF1-201ENST00000373887 NLRX1Q86UT6 975 aa15.82■□□□□ 0.12
TRAF1-201ENST00000373887 ANKFY1Q9P2R3 1169 aa15.82■□□□□ 0.12
TRAF1-201ENST00000373887 SYNRGQ9UMZ2 1314 aa15.82■□□□□ 0.12
TRAF1-201ENST00000373887 C17orf53Q8N3J3 647 aaPredicted RBP15.82■□□□□ 0.12
TRAF1-201ENST00000373887 ABT1Q9ULW3 272 aaKnown RBP15.82■□□□□ 0.12
TRAF1-201ENST00000373887 DNM3Q9UQ16 869 aa15.82■□□□□ 0.12
TRAF1-201ENST00000373887 VWA3BQ502W6 1294 aa15.82■□□□□ 0.12
TRAF1-201ENST00000373887 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.82■□□□□ 0.12
TRAF1-201ENST00000373887 ERO1AQ96HE7 468 aa15.82■□□□□ 0.12
TRAF1-201ENST00000373887 NOX5Q96PH1 765 aa15.82■□□□□ 0.12
TRAF1-201ENST00000373887 ROBO2Q9HCK4 1378 aa15.82■□□□□ 0.12
TRAF1-201ENST00000373887 KDM5AP29375 1690 aaKnown RBP15.82■□□□□ 0.12
TRAF1-201ENST00000373887 HERC4Q5GLZ8 1057 aaPredicted RBP15.81■□□□□ 0.12
TRAF1-201ENST00000373887 SPC25Q9HBM1 224 aa15.81■□□□□ 0.12
TRAF1-201ENST00000373887 GDF11O95390 407 aa15.81■□□□□ 0.12
TRAF1-201ENST00000373887 ICA1Q05084 483 aa15.81■□□□□ 0.12
TRAF1-201ENST00000373887 IFNL3Q8IZI9 196 aa15.81■□□□□ 0.12
TRAF1-201ENST00000373887 VPS37BQ9H9H4 285 aa15.81■□□□□ 0.12
TRAF1-201ENST00000373887 PLEKHG1Q9ULL1 1385 aa15.81■□□□□ 0.12
TRAF1-201ENST00000373887 LRMPQ12912 555 aa15.81■□□□□ 0.12
TRAF1-201ENST00000373887 DCAF15Q66K64 600 aa15.81■□□□□ 0.12
TRAF1-201ENST00000373887 POTEDQ86YR6 584 aa15.81■□□□□ 0.12
TRAF1-201ENST00000373887 CERS3Q8IU89 383 aa15.81■□□□□ 0.12
TRAF1-201ENST00000373887 KCNH3Q9ULD8 1083 aa15.81■□□□□ 0.12
TRAF1-201ENST00000373887 GOLGA6BA6NDN3 693 aa15.81■□□□□ 0.12
TRAF1-201ENST00000373887 PLXNC1O60486 1568 aa15.8■□□□□ 0.12
TRAF1-201ENST00000373887 TRIM68Q6AZZ1 485 aa15.8■□□□□ 0.12
TRAF1-201ENST00000373887 CNNM4Q6P4Q7 775 aa15.8■□□□□ 0.12
TRAF1-201ENST00000373887 MIGA2Q7L4E1 593 aa15.8■□□□□ 0.12
TRAF1-201ENST00000373887 MIER3Q7Z3K6 550 aa15.8■□□□□ 0.12
TRAF1-201ENST00000373887 RNF10Q8N5U6 811 aaKnown RBP15.8■□□□□ 0.12
TRAF1-201ENST00000373887 TMEM232C9JQI7 657 aa15.8■□□□□ 0.12
TRAF1-201ENST00000373887 SGSM2O43147 1006 aa15.8■□□□□ 0.12
TRAF1-201ENST00000373887 LPXNO60711 386 aa15.8■□□□□ 0.12
TRAF1-201ENST00000373887 GAS7O60861 476 aa15.8■□□□□ 0.12
TRAF1-201ENST00000373887 Q3C1V9 767 aa15.8■□□□□ 0.12
TRAF1-201ENST00000373887 DCUN1D2Q6PH85 259 aa15.8■□□□□ 0.12
TRAF1-201ENST00000373887 SESTD1Q86VW0 696 aa15.8■□□□□ 0.12
TRAF1-201ENST00000373887 CSGALNACT2Q8N6G5 542 aa15.8■□□□□ 0.12
TRAF1-201ENST00000373887 ZSCAN10Q96SZ4 725 aaPredicted RBP15.8■□□□□ 0.12
TRAF1-201ENST00000373887 PCCAP05165 728 aaPredicted RBP15.8■□□□□ 0.12
TRAF1-201ENST00000373887 IFRD2Q12894 506 aaPredicted RBP15.8■□□□□ 0.12
TRAF1-201ENST00000373887 CCDC105Q8IYK2 499 aa15.8■□□□□ 0.12
TRAF1-201ENST00000373887 GDAP1L1Q96MZ0 367 aa15.8■□□□□ 0.12
TRAF1-201ENST00000373887 CSRNP1Q96S65 589 aa15.8■□□□□ 0.12
TRAF1-201ENST00000373887 RIOK3O14730 519 aaKnown RBP15.8■□□□□ 0.12
TRAF1-201ENST00000373887 SMIM24O75264 130 aa15.8■□□□□ 0.12
TRAF1-201ENST00000373887 KRT40Q6A162 431 aa15.8■□□□□ 0.12
TRAF1-201ENST00000373887 KRT25Q7Z3Z0 450 aa15.8■□□□□ 0.12
TRAF1-201ENST00000373887 PHLDB2Q86SQ0 1253 aa15.8■□□□□ 0.12
TRAF1-201ENST00000373887 CHURC1Q8WUH1 139 aa15.8■□□□□ 0.12
TRAF1-201ENST00000373887 RAB3IPQ96QF0 476 aaPredicted RBP15.8■□□□□ 0.12
TRAF1-201ENST00000373887 A0A0D9SFI3 127 aa15.8■□□□□ 0.12
TRAF1-201ENST00000373887 CCDC38Q502W7 563 aa15.8■□□□□ 0.12
TRAF1-201ENST00000373887 NXNQ6DKJ4 435 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms