RNA–Protein interactions for RNA: ENST00000373700.8

HERC4-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERC4, Length 3,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-202ENST00000373700 CCDC174Q6PII3 467 aa8.78□□□□□ -1
HERC4-202ENST00000373700 ADGRA1Q86SQ6 560 aa8.78□□□□□ -1
HERC4-202ENST00000373700 ENAHQ8N8S7 591 aaPredicted RBP8.78□□□□□ -1
HERC4-202ENST00000373700 COA7Q96BR5 231 aa8.78□□□□□ -1
HERC4-202ENST00000373700 TDRD3Q9H7E2 651 aaKnown RBP8.78□□□□□ -1
HERC4-202ENST00000373700 SAMSN1Q9NSI8 373 aaKnown RBP8.78□□□□□ -1
HERC4-202ENST00000373700 LUC7L2Q9Y383 392 aaKnown RBP8.78□□□□□ -1
HERC4-202ENST00000373700 LTN1O94822 1766 aa8.78□□□□□ -1
HERC4-202ENST00000373700 TBC1D8BQ0IIM8 1120 aa8.78□□□□□ -1
HERC4-202ENST00000373700 BMS1Q14692 1282 aaKnown RBP8.78□□□□□ -1
HERC4-202ENST00000373700 SF3B3Q15393 1217 aaKnown RBP8.78□□□□□ -1
HERC4-202ENST00000373700 TMEM132AQ24JP5 1023 aa8.78□□□□□ -1
HERC4-202ENST00000373700 CTR9Q6PD62 1173 aa8.78□□□□□ -1
HERC4-202ENST00000373700 KRT222Q8N1A0 295 aa8.78□□□□□ -1
HERC4-202ENST00000373700 PSMB7Q99436 277 aa8.78□□□□□ -1
HERC4-202ENST00000373700 SLF1Q9BQI6 1058 aa8.78□□□□□ -1
HERC4-202ENST00000373700 LRRC4BQ9NT99 713 aa8.78□□□□□ -1
HERC4-202ENST00000373700 ABCC12Q96J65 1359 aa8.77□□□□□ -1
HERC4-202ENST00000373700 MACROD2A1Z1Q3 448 aa8.77□□□□□ -1
HERC4-202ENST00000373700 CFBP00751 764 aa8.77□□□□□ -1
HERC4-202ENST00000373700 NOP2P46087 812 aaKnown RBP8.77□□□□□ -1
HERC4-202ENST00000373700 UBE2Q2Q8WVN8 375 aa8.77□□□□□ -1
HERC4-202ENST00000373700 NSUN4Q96CB9 384 aaKnown RBP8.77□□□□□ -1
HERC4-202ENST00000373700 CRACR2AQ9BSW2 395 aa8.77□□□□□ -1
HERC4-202ENST00000373700 ZNF408Q9H9D4 720 aa8.77□□□□□ -1
HERC4-202ENST00000373700 LY9Q9HBG7 655 aa8.77□□□□□ -1
HERC4-202ENST00000373700 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.77□□□□□ -1
HERC4-202ENST00000373700 AKAP12Q02952 1782 aa8.77□□□□□ -1
HERC4-202ENST00000373700 GOLGA6L9A6NEM1 432 aa8.77□□□□□ -1.01
HERC4-202ENST00000373700 USP27XA6NNY8 438 aa8.77□□□□□ -1.01
HERC4-202ENST00000373700 WDHD1O75717 1129 aaPredicted RBP8.77□□□□□ -1.01
HERC4-202ENST00000373700 FDPSP14324 419 aaKnown RBP8.77□□□□□ -1.01
HERC4-202ENST00000373700 IFNAR1P17181 557 aa8.77□□□□□ -1.01
HERC4-202ENST00000373700 HMGB2P26583 209 aaKnown RBP8.77□□□□□ -1.01
HERC4-202ENST00000373700 GNA11P29992 359 aa8.77□□□□□ -1.01
HERC4-202ENST00000373700 USP8P40818 1118 aa8.77□□□□□ -1.01
HERC4-202ENST00000373700 PPARDQ03181 441 aa8.77□□□□□ -1.01
HERC4-202ENST00000373700 SPAG1Q07617 926 aa8.77□□□□□ -1.01
HERC4-202ENST00000373700 TSGA10IPQ3SY00 556 aa8.77□□□□□ -1.01
HERC4-202ENST00000373700 KRT79Q5XKE5 535 aa8.77□□□□□ -1.01
HERC4-202ENST00000373700 SPECC1LQ69YQ0 1117 aa8.77□□□□□ -1.01
HERC4-202ENST00000373700 CSGALNACT2Q8N6G5 542 aa8.77□□□□□ -1.01
HERC4-202ENST00000373700 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.77□□□□□ -1.01
HERC4-202ENST00000373700 KIFC2Q96AC6 838 aa8.77□□□□□ -1.01
HERC4-202ENST00000373700 ARFGAP3Q9NP61 516 aa8.77□□□□□ -1.01
HERC4-202ENST00000373700 ZNF277Q9NRM2 450 aaPredicted RBP8.77□□□□□ -1.01
HERC4-202ENST00000373700 FAM205CA6NFA0 338 aa8.77□□□□□ -1.01
HERC4-202ENST00000373700 SPDYE3A6NKU9 549 aa8.77□□□□□ -1.01
HERC4-202ENST00000373700 DDX39AO00148 427 aaKnown RBP8.77□□□□□ -1.01
HERC4-202ENST00000373700 SORBS3O60504 671 aa8.77□□□□□ -1.01
HERC4-202ENST00000373700 EIF3JO75822 258 aaKnown RBP8.77□□□□□ -1.01
HERC4-202ENST00000373700 SCG2P13521 617 aa8.77□□□□□ -1.01
HERC4-202ENST00000373700 GYS1P13807 737 aa8.77□□□□□ -1.01
HERC4-202ENST00000373700 UBXN2AP68543 259 aa8.77□□□□□ -1.01
HERC4-202ENST00000373700 LEKR1Q6ZMV7 388 aa8.77□□□□□ -1.01
HERC4-202ENST00000373700 MAEAQ7L5Y9 396 aa8.77□□□□□ -1.01
HERC4-202ENST00000373700 NIM1KQ8IY84 436 aa8.77□□□□□ -1.01
HERC4-202ENST00000373700 FMR1NBQ8N0W7 255 aaPredicted RBP8.77□□□□□ -1.01
HERC4-202ENST00000373700 CSRNP1Q96S65 589 aa8.77□□□□□ -1.01
HERC4-202ENST00000373700 LUC7LQ9NQ29 371 aaKnown RBP8.77□□□□□ -1.01
HERC4-202ENST00000373700 MED1Q15648 1581 aaPredicted RBP8.77□□□□□ -1.01
HERC4-202ENST00000373700 SPATA31A6Q5VVP1 1343 aa8.76□□□□□ -1.01
HERC4-202ENST00000373700 USO1O60763 962 aaKnown RBP8.76□□□□□ -1.01
HERC4-202ENST00000373700 FMNL1O95466 1100 aaPredicted RBP8.76□□□□□ -1.01
HERC4-202ENST00000373700 MMP1P03956 469 aa8.76□□□□□ -1.01
HERC4-202ENST00000373700 MYCNP04198 464 aaPredicted RBP8.76□□□□□ -1.01
HERC4-202ENST00000373700 TECP42680 631 aa8.76□□□□□ -1.01
HERC4-202ENST00000373700 PAK1Q13153 545 aa8.76□□□□□ -1.01
HERC4-202ENST00000373700 EZH2Q15910 746 aaKnown RBP8.76□□□□□ -1.01
HERC4-202ENST00000373700 CERKLQ49MI3 558 aaPredicted RBP8.76□□□□□ -1.01
HERC4-202ENST00000373700 NELFBQ8WX92 580 aa8.76□□□□□ -1.01
HERC4-202ENST00000373700 CCDC42Q96M95 316 aa8.76□□□□□ -1.01
HERC4-202ENST00000373700 SERPINB13Q9UIV8 391 aa8.76□□□□□ -1.01
HERC4-202ENST00000373700 ZBTB12Q9Y330 459 aaPredicted RBP8.76□□□□□ -1.01
HERC4-202ENST00000373700 KNDC1Q76NI1 1749 aa8.76□□□□□ -1.01
HERC4-202ENST00000373700 CCDC66A2RUB6 948 aa8.76□□□□□ -1.01
HERC4-202ENST00000373700 CTAGE9A4FU28 777 aa8.76□□□□□ -1.01
HERC4-202ENST00000373700 CDK8P49336 464 aa8.76□□□□□ -1.01
HERC4-202ENST00000373700 PLCD1P51178 756 aa8.76□□□□□ -1.01
HERC4-202ENST00000373700 EVX2Q03828 476 aa8.76□□□□□ -1.01
HERC4-202ENST00000373700 SYCP1Q15431 976 aa8.76□□□□□ -1.01
HERC4-202ENST00000373700 DHX37Q8IY37 1157 aaKnown RBP8.76□□□□□ -1.01
HERC4-202ENST00000373700 TBC1D16Q8TBP0 767 aa8.76□□□□□ -1.01
HERC4-202ENST00000373700 GDAP1L1Q96MZ0 367 aa8.76□□□□□ -1.01
HERC4-202ENST00000373700 SRRTQ9BXP5 876 aaKnown RBP8.76□□□□□ -1.01
HERC4-202ENST00000373700 CLEC11AQ9Y240 323 aa8.76□□□□□ -1.01
HERC4-202ENST00000373700 TMCO5BA8MYB1 307 aa8.76□□□□□ -1.01
HERC4-202ENST00000373700 TMEM232C9JQI7 657 aa8.76□□□□□ -1.01
HERC4-202ENST00000373700 LMAN1P49257 510 aa8.76□□□□□ -1.01
HERC4-202ENST00000373700 RNASE9P60153 205 aaKnown RBP8.76□□□□□ -1.01
HERC4-202ENST00000373700 CCDC122Q5T0U0 273 aa8.76□□□□□ -1.01
HERC4-202ENST00000373700 BLIDQ8IZY5 108 aa8.76□□□□□ -1.01
HERC4-202ENST00000373700 STAG2Q8N3U4 1231 aa8.76□□□□□ -1.01
HERC4-202ENST00000373700 CNKSR1Q969H4 720 aa8.76□□□□□ -1.01
HERC4-202ENST00000373700 ERO1AQ96HE7 468 aa8.76□□□□□ -1.01
HERC4-202ENST00000373700 PIGSQ96S52 555 aa8.76□□□□□ -1.01
HERC4-202ENST00000373700 PYM1Q9BRP8 204 aaKnown RBP8.76□□□□□ -1.01
HERC4-202ENST00000373700 IMPACTQ9P2X3 320 aa8.76□□□□□ -1.01
HERC4-202ENST00000373700 TNS2Q63HR2 1409 aa8.76□□□□□ -1.01
HERC4-202ENST00000373700 CTAGE15A4D2H0 777 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms