RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 STXBP3O00186 592 aa22.41■■□□□ 1.18
HDAC1-201ENST00000373548 TRAPPC10P48553 1259 aa22.41■■□□□ 1.18
HDAC1-201ENST00000373548 ZNF75DP51815 510 aa22.41■■□□□ 1.18
HDAC1-201ENST00000373548 USP49Q70CQ1 688 aa22.41■■□□□ 1.18
HDAC1-201ENST00000373548 DEFB132Q7Z7B7 95 aa22.41■■□□□ 1.18
HDAC1-201ENST00000373548 ZFPM1Q8IX07 1006 aa22.41■■□□□ 1.18
HDAC1-201ENST00000373548 BARHL2Q9NY43 387 aa22.41■■□□□ 1.18
HDAC1-201ENST00000373548 BECN2A8MW95 431 aa22.4■■□□□ 1.18
HDAC1-201ENST00000373548 C21orf2O43822 256 aa22.4■■□□□ 1.18
HDAC1-201ENST00000373548 HLA-DOAP06340 250 aa22.4■■□□□ 1.18
HDAC1-201ENST00000373548 HEATR3Q7Z4Q2 680 aa22.4■■□□□ 1.18
HDAC1-201ENST00000373548 ELOA2Q8IYF1 753 aaPredicted RBP22.4■■□□□ 1.18
HDAC1-201ENST00000373548 AOPEPQ8N6M6 819 aa22.4■■□□□ 1.18
HDAC1-201ENST00000373548 TRIM5Q9C035 493 aa22.4■■□□□ 1.18
HDAC1-201ENST00000373548 M0R2N6 131 aa22.4■■□□□ 1.18
HDAC1-201ENST00000373548 CACNB3P54284 484 aa22.4■■□□□ 1.18
HDAC1-201ENST00000373548 CLEC10AQ8IUN9 316 aa22.4■■□□□ 1.18
HDAC1-201ENST00000373548 CCDC148Q8NFR7 591 aa22.4■■□□□ 1.18
HDAC1-201ENST00000373548 USP17L5A8MUK1 530 aa22.39■■□□□ 1.18
HDAC1-201ENST00000373548 POLR2DO15514 142 aaKnown RBP22.39■■□□□ 1.18
HDAC1-201ENST00000373548 BAG6P46379 1132 aa22.39■■□□□ 1.18
HDAC1-201ENST00000373548 ATP2C1P98194 919 aaPredicted RBP22.39■■□□□ 1.18
HDAC1-201ENST00000373548 SARM1Q6SZW1 724 aa22.39■■□□□ 1.18
HDAC1-201ENST00000373548 SPC24Q8NBT2 197 aa22.39■■□□□ 1.18
HDAC1-201ENST00000373548 DAGLBQ8NCG7 672 aa22.39■■□□□ 1.18
HDAC1-201ENST00000373548 SUPT20HQ8NEM7 779 aa22.39■■□□□ 1.18
HDAC1-201ENST00000373548 FERMT2Q96AC1 680 aa22.39■■□□□ 1.18
HDAC1-201ENST00000373548 BPIFA3Q9BQP9 254 aa22.39■■□□□ 1.18
HDAC1-201ENST00000373548 ZNF500O60304 480 aaPredicted RBP22.39■■□□□ 1.17
HDAC1-201ENST00000373548 PDHBP11177 359 aa22.39■■□□□ 1.17
HDAC1-201ENST00000373548 SMARCA1P28370 1054 aa22.39■■□□□ 1.17
HDAC1-201ENST00000373548 RBM5P52756 815 aaKnown RBP eCLIP22.39■■□□□ 1.17
HDAC1-201ENST00000373548 MDM2Q00987 491 aaPredicted RBP22.39■■□□□ 1.17
HDAC1-201ENST00000373548 PTGDRQ13258 359 aa22.39■■□□□ 1.17
HDAC1-201ENST00000373548 FOXP4Q8IVH2 680 aaPredicted RBP22.39■■□□□ 1.17
HDAC1-201ENST00000373548 RASGRP4Q8TDF6 673 aa22.39■■□□□ 1.17
HDAC1-201ENST00000373548 EHD4Q9H223 541 aa22.39■■□□□ 1.17
HDAC1-201ENST00000373548 PSME4Q14997 1843 aa22.38■■□□□ 1.17
HDAC1-201ENST00000373548 FOXN1O15353 648 aa22.38■■□□□ 1.17
HDAC1-201ENST00000373548 LRRC47Q8N1G4 583 aaKnown RBP22.38■■□□□ 1.17
HDAC1-201ENST00000373548 ZNF830Q96NB3 372 aaPredicted RBP22.38■■□□□ 1.17
HDAC1-201ENST00000373548 IDI2Q9BXS1 227 aa22.38■■□□□ 1.17
HDAC1-201ENST00000373548 SERTAD1Q9UHV2 236 aa22.38■■□□□ 1.17
HDAC1-201ENST00000373548 SERPINA10Q9UK55 444 aa22.38■■□□□ 1.17
HDAC1-201ENST00000373548 YDJCA8MPS7 323 aa22.37■■□□□ 1.17
HDAC1-201ENST00000373548 PPIP5K2O43314 1243 aa22.37■■□□□ 1.17
HDAC1-201ENST00000373548 SLURP2P0DP57 97 aa22.37■■□□□ 1.17
HDAC1-201ENST00000373548 EIF6P56537 245 aaKnown RBP22.37■■□□□ 1.17
HDAC1-201ENST00000373548 SF3B2Q13435 895 aaKnown RBP22.37■■□□□ 1.17
HDAC1-201ENST00000373548 ISM2Q6H9L7 571 aa22.37■■□□□ 1.17
HDAC1-201ENST00000373548 GALNT17Q6IS24 598 aa22.37■■□□□ 1.17
HDAC1-201ENST00000373548 FAM177A1Q8N128 213 aaPredicted RBP22.37■■□□□ 1.17
HDAC1-201ENST00000373548 FAM198AQ9UFP1 575 aa22.37■■□□□ 1.17
HDAC1-201ENST00000373548 MYH4Q9Y623 1939 aa22.37■■□□□ 1.17
HDAC1-201ENST00000373548 TCP10Q12799 353 aa22.37■■□□□ 1.17
HDAC1-201ENST00000373548 RRP36Q96EU6 259 aaKnown RBP22.37■■□□□ 1.17
HDAC1-201ENST00000373548 EPSTI1Q96J88 318 aa22.37■■□□□ 1.17
HDAC1-201ENST00000373548 DNAJC18Q9H819 358 aa22.37■■□□□ 1.17
HDAC1-201ENST00000373548 TTC12Q9H892 705 aaPredicted RBP22.37■■□□□ 1.17
HDAC1-201ENST00000373548 PCDHA6Q9UN73 950 aa22.37■■□□□ 1.17
HDAC1-201ENST00000373548 PCDHA8Q9Y5H6 950 aa22.37■■□□□ 1.17
HDAC1-201ENST00000373548 PCDHA5Q9Y5H7 936 aa22.37■■□□□ 1.17
HDAC1-201ENST00000373548 ACTN4O43707 911 aaKnown RBP22.36■■□□□ 1.17
HDAC1-201ENST00000373548 TTLL1O95922 423 aa22.36■■□□□ 1.17
HDAC1-201ENST00000373548 SNHG28P0DPA3 235 aa22.36■■□□□ 1.17
HDAC1-201ENST00000373548 MCM7P33993 719 aa22.36■■□□□ 1.17
HDAC1-201ENST00000373548 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.36■■□□□ 1.17
HDAC1-201ENST00000373548 PDILTQ8N807 584 aa22.36■■□□□ 1.17
HDAC1-201ENST00000373548 CLIP2Q9UDT6 1046 aa22.36■■□□□ 1.17
HDAC1-201ENST00000373548 HOMER1Q86YM7 354 aa22.36■■□□□ 1.17
HDAC1-201ENST00000373548 TTLL6Q8N841 843 aa22.36■■□□□ 1.17
HDAC1-201ENST00000373548 UBA5Q9GZZ9 404 aa22.36■■□□□ 1.17
HDAC1-201ENST00000373548 RIOX1Q9H6W3 641 aa22.36■■□□□ 1.17
HDAC1-201ENST00000373548 FRMPD2Q68DX3 1309 aaPredicted RBP22.36■■□□□ 1.17
HDAC1-201ENST00000373548 A0A087X0B3 334 aa22.35■■□□□ 1.17
HDAC1-201ENST00000373548 DDTLA6NHG4 134 aaPredicted RBP22.35■■□□□ 1.17
HDAC1-201ENST00000373548 POSTNQ15063 836 aa22.35■■□□□ 1.17
HDAC1-201ENST00000373548 SYMPKQ92797 1274 aaKnown RBP22.35■■□□□ 1.17
HDAC1-201ENST00000373548 PIGSQ96S52 555 aa22.35■■□□□ 1.17
HDAC1-201ENST00000373548 ZMYND12Q9H0C1 365 aa22.35■■□□□ 1.17
HDAC1-201ENST00000373548 DHX36Q9H2U1 1008 aaKnown RBP22.35■■□□□ 1.17
HDAC1-201ENST00000373548 VAT1LQ9HCJ6 419 aa22.35■■□□□ 1.17
HDAC1-201ENST00000373548 HOOK1Q9UJC3 728 aaKnown RBP22.35■■□□□ 1.17
HDAC1-201ENST00000373548 CCDC194A0A1B0GVG4 234 aa22.34■■□□□ 1.17
HDAC1-201ENST00000373548 VWA3AA6NCI4 1184 aa22.34■■□□□ 1.17
HDAC1-201ENST00000373548 GOLGA6L6A8MZA4 724 aa22.34■■□□□ 1.17
HDAC1-201ENST00000373548 NPM3O75607 178 aaKnown RBP22.34■■□□□ 1.17
HDAC1-201ENST00000373548 ASPRV1Q53RT3 343 aa22.34■■□□□ 1.17
HDAC1-201ENST00000373548 SH3BP5LQ7L8J4 393 aa22.34■■□□□ 1.17
HDAC1-201ENST00000373548 PRR29P0C7W0 189 aa22.34■■□□□ 1.17
HDAC1-201ENST00000373548 NAPAP54920 295 aa22.34■■□□□ 1.17
HDAC1-201ENST00000373548 SEC63Q9UGP8 760 aaKnown RBP22.34■■□□□ 1.17
HDAC1-201ENST00000373548 MPHOSPH10O00566 681 aaKnown RBP22.33■■□□□ 1.17
HDAC1-201ENST00000373548 CDC25BP30305 580 aa22.33■■□□□ 1.17
HDAC1-201ENST00000373548 CCDC93Q567U6 631 aa22.33■■□□□ 1.17
HDAC1-201ENST00000373548 C4orf32Q8N8J7 132 aa22.33■■□□□ 1.17
HDAC1-201ENST00000373548 CCDC12Q8WUD4 166 aaPredicted RBP22.33■■□□□ 1.17
HDAC1-201ENST00000373548 CCDC17Q96LX7 622 aa22.33■■□□□ 1.17
HDAC1-201ENST00000373548 FAM196BA6NMK8 535 aa22.33■■□□□ 1.16
HDAC1-201ENST00000373548 KCNA3P22001 575 aa22.33■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms