RNA–Protein interactions for RNA: ENST00000373253.7

NCDN-203, Transcript of neurochondrin, humanhuman

TSL 1 (best) BASIC

Gene NCDN, Length 3,677 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-203ENST00000373253 UBXN4Q92575 508 aa14.91□□□□□ -0.02
NCDN-203ENST00000373253 MRFAP1L1Q96HT8 127 aa14.91□□□□□ -0.02
NCDN-203ENST00000373253 BAG1Q99933 345 aaPredicted RBP14.91□□□□□ -0.02
NCDN-203ENST00000373253 JCADQ9P266 1359 aa14.91□□□□□ -0.02
NCDN-203ENST00000373253 UBXN2AP68543 259 aa14.91□□□□□ -0.02
NCDN-203ENST00000373253 KIF4BQ2VIQ3 1234 aa14.91□□□□□ -0.02
NCDN-203ENST00000373253 TRIM49BA6NDI0 452 aa14.9□□□□□ -0.02
NCDN-203ENST00000373253 PRPF3O43395 683 aaKnown RBP14.9□□□□□ -0.02
NCDN-203ENST00000373253 RAD17O75943 681 aa14.9□□□□□ -0.02
NCDN-203ENST00000373253 RBM6P78332 1123 aaKnown RBP14.9□□□□□ -0.02
NCDN-203ENST00000373253 ELF2Q15723 593 aa14.9□□□□□ -0.02
NCDN-203ENST00000373253 CCDC150Q8NCX0 1101 aa14.9□□□□□ -0.02
NCDN-203ENST00000373253 PUF60Q9UHX1 559 aaKnown RBP14.9□□□□□ -0.02
NCDN-203ENST00000373253 PRDM4Q9UKN5 801 aa14.9□□□□□ -0.02
NCDN-203ENST00000373253 STRCP1A6NGW2 1772 aa14.9□□□□□ -0.02
NCDN-203ENST00000373253 TEX33O43247 280 aa14.9□□□□□ -0.02
NCDN-203ENST00000373253 PDE4DQ08499 809 aa14.9□□□□□ -0.02
NCDN-203ENST00000373253 TTBK2Q6IQ55 1244 aa14.9□□□□□ -0.02
NCDN-203ENST00000373253 FBXO2Q9UK22 296 aaPredicted RBP14.9□□□□□ -0.02
NCDN-203ENST00000373253 PCDHAC2Q9Y5I4 1007 aa14.9□□□□□ -0.02
NCDN-203ENST00000373253 ADAMTS3O15072 1205 aa14.9□□□□□ -0.02
NCDN-203ENST00000373253 GYS1P13807 737 aa14.9□□□□□ -0.02
NCDN-203ENST00000373253 TAL1P17542 331 aaPredicted RBP14.9□□□□□ -0.02
NCDN-203ENST00000373253 TRIM21P19474 475 aaKnown RBP14.9□□□□□ -0.02
NCDN-203ENST00000373253 ATP2B4P23634 1241 aa14.9□□□□□ -0.02
NCDN-203ENST00000373253 SLC1A4P43007 532 aa14.9□□□□□ -0.02
NCDN-203ENST00000373253 C12orf60Q5U649 245 aa14.9□□□□□ -0.02
NCDN-203ENST00000373253 C2CD5Q86YS7 1000 aa14.9□□□□□ -0.02
NCDN-203ENST00000373253 CALML4Q96GE6 196 aa14.9□□□□□ -0.02
NCDN-203ENST00000373253 EXOC1Q9NV70 894 aa14.9□□□□□ -0.02
NCDN-203ENST00000373253 CHMP2AO43633 222 aa14.89□□□□□ -0.03
NCDN-203ENST00000373253 EPS15P42566 896 aa14.89□□□□□ -0.03
NCDN-203ENST00000373253 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.89□□□□□ -0.03
NCDN-203ENST00000373253 TBC1D16Q8TBP0 767 aa14.89□□□□□ -0.03
NCDN-203ENST00000373253 CTDP1Q9Y5B0 961 aaPredicted RBP14.89□□□□□ -0.03
NCDN-203ENST00000373253 SRPRBQ9Y5M8 271 aaKnown RBP14.89□□□□□ -0.03
NCDN-203ENST00000373253 SEC23AQ15436 765 aa14.89□□□□□ -0.03
NCDN-203ENST00000373253 REXO1Q8N1G1 1221 aaKnown RBP14.89□□□□□ -0.03
NCDN-203ENST00000373253 NELFBQ8WX92 580 aa14.89□□□□□ -0.03
NCDN-203ENST00000373253 PAGE5Q96GU1 130 aa14.89□□□□□ -0.03
NCDN-203ENST00000373253 DEF6Q9H4E7 631 aa14.89□□□□□ -0.03
NCDN-203ENST00000373253 SLC39A2Q9NP94 309 aa14.89□□□□□ -0.03
NCDN-203ENST00000373253 BMP2KQ9NSY1 1161 aaPredicted RBP14.89□□□□□ -0.03
NCDN-203ENST00000373253 ECM2O94769 699 aaPredicted RBP14.89□□□□□ -0.03
NCDN-203ENST00000373253 TBCKQ8TEA7 893 aa14.89□□□□□ -0.03
NCDN-203ENST00000373253 NEMFO60524 1076 aa14.88□□□□□ -0.03
NCDN-203ENST00000373253 AKR1B1P15121 316 aa14.88□□□□□ -0.03
NCDN-203ENST00000373253 PLCG2P16885 1265 aa14.88□□□□□ -0.03
NCDN-203ENST00000373253 LRRC41Q15345 812 aa14.88□□□□□ -0.03
NCDN-203ENST00000373253 WWC2Q6AWC2 1192 aa14.88□□□□□ -0.03
NCDN-203ENST00000373253 ARMCX5Q6P1M9 558 aa14.88□□□□□ -0.03
NCDN-203ENST00000373253 NELFCDQ8IXH7 590 aa14.88□□□□□ -0.03
NCDN-203ENST00000373253 ALS2Q96Q42 1657 aa14.88□□□□□ -0.03
NCDN-203ENST00000373253 EVCP57679 992 aa14.88□□□□□ -0.03
NCDN-203ENST00000373253 PLS1Q14651 629 aa14.88□□□□□ -0.03
NCDN-203ENST00000373253 NONOQ15233 471 aaKnown RBP eCLIP14.88□□□□□ -0.03
NCDN-203ENST00000373253 MLKLQ8NB16 471 aa14.88□□□□□ -0.03
NCDN-203ENST00000373253 MAP3K14Q99558 947 aa14.88□□□□□ -0.03
NCDN-203ENST00000373253 FEZ1Q99689 392 aa14.88□□□□□ -0.03
NCDN-203ENST00000373253 SRRTQ9BXP5 876 aaKnown RBP14.88□□□□□ -0.03
NCDN-203ENST00000373253 DDAH1O94760 285 aa14.88□□□□□ -0.03
NCDN-203ENST00000373253 PKN1Q16512 942 aa14.88□□□□□ -0.03
NCDN-203ENST00000373253 ERCC6LQ2NKX8 1250 aa14.88□□□□□ -0.03
NCDN-203ENST00000373253 MIGA2Q7L4E1 593 aa14.88□□□□□ -0.03
NCDN-203ENST00000373253 IRX2Q9BZI1 471 aaPredicted RBP14.88□□□□□ -0.03
NCDN-203ENST00000373253 EPC1Q9H2F5 836 aa14.88□□□□□ -0.03
NCDN-203ENST00000373253 TMOD2Q9NZR1 351 aa14.88□□□□□ -0.03
NCDN-203ENST00000373253 GUCA1BQ9UMX6 200 aa14.88□□□□□ -0.03
NCDN-203ENST00000373253 C21orf2O43822 256 aa14.87□□□□□ -0.03
NCDN-203ENST00000373253 GNA11P29992 359 aa14.87□□□□□ -0.03
NCDN-203ENST00000373253 CASQ1P31415 396 aa14.87□□□□□ -0.03
NCDN-203ENST00000373253 MTF1Q14872 753 aa14.87□□□□□ -0.03
NCDN-203ENST00000373253 FKBP15Q5T1M5 1219 aa14.87□□□□□ -0.03
NCDN-203ENST00000373253 MAEAQ7L5Y9 396 aa14.87□□□□□ -0.03
NCDN-203ENST00000373253 TEKT1Q969V4 418 aa14.87□□□□□ -0.03
NCDN-203ENST00000373253 TMEM60Q9H2L4 133 aa14.87□□□□□ -0.03
NCDN-203ENST00000373253 ZNF142P52746 1687 aaPredicted RBP14.87□□□□□ -0.03
NCDN-203ENST00000373253 ARFGEF2Q9Y6D5 1785 aa14.87□□□□□ -0.03
NCDN-203ENST00000373253 VGLL3A8MV65 326 aa14.87□□□□□ -0.03
NCDN-203ENST00000373253 H0YIN7 160 aa14.87□□□□□ -0.03
NCDN-203ENST00000373253 PPIP5K2O43314 1243 aa14.87□□□□□ -0.03
NCDN-203ENST00000373253 NFIAQ12857 509 aa14.87□□□□□ -0.03
NCDN-203ENST00000373253 TMEM266Q2M3C6 531 aa14.87□□□□□ -0.03
NCDN-203ENST00000373253 TCERG1LQ5VWI1 586 aa14.87□□□□□ -0.03
NCDN-203ENST00000373253 ZNF771Q7L3S4 317 aaPredicted RBP14.87□□□□□ -0.03
NCDN-203ENST00000373253 KIAA1328Q86T90 577 aa14.87□□□□□ -0.03
NCDN-203ENST00000373253 CABP7Q86V35 215 aa14.87□□□□□ -0.03
NCDN-203ENST00000373253 TDRD3Q9H7E2 651 aaKnown RBP14.87□□□□□ -0.03
NCDN-203ENST00000373253 IL17RBQ9NRM6 502 aa14.87□□□□□ -0.03
NCDN-203ENST00000373253 ZBTB21Q9ULJ3 1066 aa14.87□□□□□ -0.03
NCDN-203ENST00000373253 USP17L15C9J2P7 530 aa14.87□□□□□ -0.03
NCDN-203ENST00000373253 USP17L13C9JLJ4 530 aa14.87□□□□□ -0.03
NCDN-203ENST00000373253 USP17L11C9JVI0 530 aa14.87□□□□□ -0.03
NCDN-203ENST00000373253 USP17L18D6R9N7 530 aa14.87□□□□□ -0.03
NCDN-203ENST00000373253 USP17L22D6RA61 530 aa14.87□□□□□ -0.03
NCDN-203ENST00000373253 USP17L17D6RBQ6 530 aa14.87□□□□□ -0.03
NCDN-203ENST00000373253 USP17L19D6RCP7 530 aa14.87□□□□□ -0.03
NCDN-203ENST00000373253 USP17L20D6RJB6 530 aa14.87□□□□□ -0.03
NCDN-203ENST00000373253 SEMA3EO15041 775 aa14.87□□□□□ -0.03
NCDN-203ENST00000373253 USP17L24Q0WX57 530 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms