RNA–Protein interactions for RNA: ENST00000373243.6

NCDN-202, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-202ENST00000373243 ARHGAP23Q9P227 1491 aa13.55□□□□□ -0.24
NCDN-202ENST00000373243 ERVV-2B6SEH9 535 aa13.55□□□□□ -0.24
NCDN-202ENST00000373243 ZPR1O75312 459 aa13.55□□□□□ -0.24
NCDN-202ENST00000373243 GNAT2P19087 354 aa13.55□□□□□ -0.24
NCDN-202ENST00000373243 HNRNPH1P31943 449 aaKnown RBP13.55□□□□□ -0.24
NCDN-202ENST00000373243 KCNQ4P56696 695 aa13.55□□□□□ -0.24
NCDN-202ENST00000373243 GSCP56915 257 aaPredicted RBP13.55□□□□□ -0.24
NCDN-202ENST00000373243 IKQ13123 557 aaPredicted RBP13.55□□□□□ -0.24
NCDN-202ENST00000373243 DTHD1Q6ZMT9 781 aa13.55□□□□□ -0.24
NCDN-202ENST00000373243 FOXP4Q8IVH2 680 aaPredicted RBP13.55□□□□□ -0.24
NCDN-202ENST00000373243 CCDC189A1A4V9 331 aa13.55□□□□□ -0.24
NCDN-202ENST00000373243 TADA3O75528 432 aa13.55□□□□□ -0.24
NCDN-202ENST00000373243 PLEKHA8P1O95397 391 aa13.55□□□□□ -0.24
NCDN-202ENST00000373243 TFRCP02786 760 aaKnown RBP13.55□□□□□ -0.24
NCDN-202ENST00000373243 SWT1Q5T5J6 900 aaKnown RBP13.55□□□□□ -0.24
NCDN-202ENST00000373243 TICAM2Q86XR7 235 aa13.55□□□□□ -0.24
NCDN-202ENST00000373243 ANKRD13CQ8N6S4 541 aa13.55□□□□□ -0.24
NCDN-202ENST00000373243 ENOX1Q8TC92 643 aaKnown RBP13.55□□□□□ -0.24
NCDN-202ENST00000373243 VEZTQ9HBM0 779 aa13.55□□□□□ -0.24
NCDN-202ENST00000373243 EXOC1Q9NV70 894 aa13.55□□□□□ -0.24
NCDN-202ENST00000373243 CPSF2Q9P2I0 782 aaKnown RBP13.55□□□□□ -0.24
NCDN-202ENST00000373243 KIF5BP33176 963 aa13.54□□□□□ -0.24
NCDN-202ENST00000373243 CRACR2BQ8N4Y2 399 aaPredicted RBP13.54□□□□□ -0.24
NCDN-202ENST00000373243 RABGGTAQ92696 567 aa13.54□□□□□ -0.24
NCDN-202ENST00000373243 MRPL44Q9H9J2 332 aaKnown RBP13.54□□□□□ -0.24
NCDN-202ENST00000373243 SUGCTQ9HAC7 445 aa13.54□□□□□ -0.24
NCDN-202ENST00000373243 PTPREP23469 700 aa13.54□□□□□ -0.24
NCDN-202ENST00000373243 KIF5AQ12840 1032 aa13.54□□□□□ -0.24
NCDN-202ENST00000373243 CYP26C1Q6V0L0 522 aa13.54□□□□□ -0.24
NCDN-202ENST00000373243 SRGAP1Q7Z6B7 1085 aa13.54□□□□□ -0.24
NCDN-202ENST00000373243 TMTC1Q8IUR5 882 aa13.54□□□□□ -0.24
NCDN-202ENST00000373243 CSGALNACT2Q8N6G5 542 aa13.54□□□□□ -0.24
NCDN-202ENST00000373243 CDC23Q9UJX2 597 aa13.54□□□□□ -0.24
NCDN-202ENST00000373243 PALLDQ8WX93 1383 aa13.54□□□□□ -0.24
NCDN-202ENST00000373243 RGPD8O14715 1765 aaPredicted RBP13.54□□□□□ -0.24
NCDN-202ENST00000373243 KCNJ18B7U540 433 aa13.54□□□□□ -0.24
NCDN-202ENST00000373243 KRT86O43790 486 aa13.54□□□□□ -0.24
NCDN-202ENST00000373243 USO1O60763 962 aaKnown RBP13.54□□□□□ -0.24
NCDN-202ENST00000373243 CYLC1P35663 651 aaPredicted RBP13.54□□□□□ -0.24
NCDN-202ENST00000373243 MORC3Q14149 939 aa13.54□□□□□ -0.24
NCDN-202ENST00000373243 KCNJ12Q14500 433 aa13.54□□□□□ -0.24
NCDN-202ENST00000373243 PIGBQ92521 554 aa13.54□□□□□ -0.24
NCDN-202ENST00000373243 CRNKL1Q9BZJ0 848 aaKnown RBP13.54□□□□□ -0.24
NCDN-202ENST00000373243 RMND1Q9NWS8 449 aa13.54□□□□□ -0.24
NCDN-202ENST00000373243 TTF2Q9UNY4 1162 aaKnown RBP13.54□□□□□ -0.24
NCDN-202ENST00000373243 SOS2Q07890 1332 aaPredicted RBP13.53□□□□□ -0.24
NCDN-202ENST00000373243 MAP3K15Q6ZN16 1313 aa13.53□□□□□ -0.24
NCDN-202ENST00000373243 PAFAH1B1P43034 410 aa13.53□□□□□ -0.24
NCDN-202ENST00000373243 CCT5P48643 541 aa13.53□□□□□ -0.24
NCDN-202ENST00000373243 KIRREL3Q8IZU9 778 aa13.53□□□□□ -0.24
NCDN-202ENST00000373243 GDAQ9Y2T3 454 aa13.53□□□□□ -0.24
NCDN-202ENST00000373243 RTL9Q8NET4 1388 aa13.53□□□□□ -0.24
NCDN-202ENST00000373243 BMP15O95972 392 aa13.53□□□□□ -0.24
NCDN-202ENST00000373243 HLTFQ14527 1009 aaKnown RBP eCLIP13.53□□□□□ -0.24
NCDN-202ENST00000373243 AP1ARQ63HQ0 302 aa13.53□□□□□ -0.24
NCDN-202ENST00000373243 ABCB6Q9NP58 842 aa13.53□□□□□ -0.24
NCDN-202ENST00000373243 SAP30BPQ9UHR5 308 aaKnown RBP13.53□□□□□ -0.24
NCDN-202ENST00000373243 SLIT1O75093 1534 aa13.53□□□□□ -0.24
NCDN-202ENST00000373243 NCAPD2Q15021 1401 aa13.53□□□□□ -0.24
NCDN-202ENST00000373243 SRGAP2O75044 1071 aa13.53□□□□□ -0.24
NCDN-202ENST00000373243 TSPY3P0CV98 308 aa13.53□□□□□ -0.24
NCDN-202ENST00000373243 TSPY8P0CW00 308 aa13.53□□□□□ -0.24
NCDN-202ENST00000373243 NAA25Q14CX7 972 aa13.53□□□□□ -0.24
NCDN-202ENST00000373243 BPIFA3Q9BQP9 254 aa13.53□□□□□ -0.24
NCDN-202ENST00000373243 UBA5Q9GZZ9 404 aa13.53□□□□□ -0.24
NCDN-202ENST00000373243 PARP3Q9Y6F1 533 aa13.53□□□□□ -0.24
NCDN-202ENST00000373243 CAPN7Q9Y6W3 813 aa13.53□□□□□ -0.24
NCDN-202ENST00000373243 EBAG9O00559 213 aa13.52□□□□□ -0.24
NCDN-202ENST00000373243 ZEB2O60315 1214 aa13.52□□□□□ -0.24
NCDN-202ENST00000373243 NMT2O60551 498 aa13.52□□□□□ -0.24
NCDN-202ENST00000373243 GOLGA8HP0CJ92 632 aa13.52□□□□□ -0.24
NCDN-202ENST00000373243 NAPAP54920 295 aa13.52□□□□□ -0.24
NCDN-202ENST00000373243 CYP27A1Q02318 531 aa13.52□□□□□ -0.24
NCDN-202ENST00000373243 PDE4DQ08499 809 aa13.52□□□□□ -0.24
NCDN-202ENST00000373243 PTPROQ16827 1216 aa13.52□□□□□ -0.24
NCDN-202ENST00000373243 ODF2Q5BJF6 829 aa13.52□□□□□ -0.24
NCDN-202ENST00000373243 PAGE5Q96GU1 130 aa13.52□□□□□ -0.24
NCDN-202ENST00000373243 FAM207AQ9NSI2 230 aaPredicted RBP13.52□□□□□ -0.24
NCDN-202ENST00000373243 SEC63Q9UGP8 760 aaKnown RBP13.52□□□□□ -0.24
NCDN-202ENST00000373243 GCKP35557 465 aa13.52□□□□□ -0.25
NCDN-202ENST00000373243 CLNS1AP54105 237 aaKnown RBP13.52□□□□□ -0.25
NCDN-202ENST00000373243 DYMQ7RTS9 669 aa13.52□□□□□ -0.25
NCDN-202ENST00000373243 ZNF513Q8N8E2 541 aaPredicted RBP13.52□□□□□ -0.25
NCDN-202ENST00000373243 TC2NQ8N9U0 490 aa13.52□□□□□ -0.25
NCDN-202ENST00000373243 IGDCC4Q8TDY8 1250 aa13.52□□□□□ -0.25
NCDN-202ENST00000373243 IFT81Q8WYA0 676 aa13.52□□□□□ -0.25
NCDN-202ENST00000373243 ZSCAN10Q96SZ4 725 aaPredicted RBP13.52□□□□□ -0.25
NCDN-202ENST00000373243 FOXP1Q9H334 677 aaPredicted RBP13.52□□□□□ -0.25
NCDN-202ENST00000373243 FAM204AQ9H8W3 233 aa13.52□□□□□ -0.25
NCDN-202ENST00000373243 L2HGDHQ9H9P8 463 aa13.52□□□□□ -0.25
NCDN-202ENST00000373243 TFR2Q9UP52 801 aa13.52□□□□□ -0.25
NCDN-202ENST00000373243 PEAK1Q9H792 1746 aa13.52□□□□□ -0.25
NCDN-202ENST00000373243 SKAP2O75563 359 aaPredicted RBP13.52□□□□□ -0.25
NCDN-202ENST00000373243 INPP5BP32019 993 aa13.52□□□□□ -0.25
NCDN-202ENST00000373243 NEDD9Q14511 834 aa13.52□□□□□ -0.25
NCDN-202ENST00000373243 JAKMIP2Q96AA8 810 aa13.52□□□□□ -0.25
NCDN-202ENST00000373243 MYO6Q9UM54 1294 aa13.52□□□□□ -0.25
NCDN-202ENST00000373243 SRPRBQ9Y5M8 271 aaKnown RBP13.52□□□□□ -0.25
NCDN-202ENST00000373243 EPN1Q9Y6I3 576 aaPredicted RBP13.52□□□□□ -0.25
NCDN-202ENST00000373243 TRIM49BA6NDI0 452 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms