RNA–Protein interactions for RNA: ENST00000373166.7

TRAPPC3-204, Transcript of trafficking protein particle complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC3, Length 1,265 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-204ENST00000373166 DCP1AQ9NPI6 582 aaPredicted RBP23.07■■□□□ 1.28
TRAPPC3-204ENST00000373166 NRBP1Q9UHY1 535 aa23.07■■□□□ 1.28
TRAPPC3-204ENST00000373166 TMX2Q9Y320 296 aa23.07■■□□□ 1.28
TRAPPC3-204ENST00000373166 TACC3Q9Y6A5 838 aa23.07■■□□□ 1.28
TRAPPC3-204ENST00000373166 ZNF236Q9UL36 1845 aa23.07■■□□□ 1.28
TRAPPC3-204ENST00000373166 ZNF532Q9HCE3 1301 aa23.07■■□□□ 1.28
TRAPPC3-204ENST00000373166 SLC25A27O95847 323 aa23.06■■□□□ 1.28
TRAPPC3-204ENST00000373166 RARBP10826 455 aa23.06■■□□□ 1.28
TRAPPC3-204ENST00000373166 ATP5JP18859 108 aa23.06■■□□□ 1.28
TRAPPC3-204ENST00000373166 SAMD1Q6SPF0 538 aaPredicted RBP23.06■■□□□ 1.28
TRAPPC3-204ENST00000373166 SLC44A5Q8NCS7 719 aa23.06■■□□□ 1.28
TRAPPC3-204ENST00000373166 GPATCH3Q96I76 525 aa23.06■■□□□ 1.28
TRAPPC3-204ENST00000373166 XPNPEP3Q9NQH7 507 aa23.06■■□□□ 1.28
TRAPPC3-204ENST00000373166 ICA1Q05084 483 aa23.05■■□□□ 1.28
TRAPPC3-204ENST00000373166 RNF180Q86T96 592 aa23.05■■□□□ 1.28
TRAPPC3-204ENST00000373166 SIAH1Q8IUQ4 282 aa23.05■■□□□ 1.28
TRAPPC3-204ENST00000373166 MYLIPQ8WY64 445 aa23.05■■□□□ 1.28
TRAPPC3-204ENST00000373166 TTYH1Q9H313 450 aaPredicted RBP23.05■■□□□ 1.28
TRAPPC3-204ENST00000373166 BOLA2Q9H3K6 86 aa23.05■■□□□ 1.28
TRAPPC3-204ENST00000373166 VCPKMTQ9H867 229 aa23.05■■□□□ 1.28
TRAPPC3-204ENST00000373166 PHF24Q9UPV7 400 aa23.05■■□□□ 1.28
TRAPPC3-204ENST00000373166 WDR46O15213 610 aaKnown RBP23.04■■□□□ 1.28
TRAPPC3-204ENST00000373166 CYP2D6P10635 497 aa23.04■■□□□ 1.28
TRAPPC3-204ENST00000373166 TMEM132BQ14DG7 1078 aa23.04■■□□□ 1.28
TRAPPC3-204ENST00000373166 LCORLQ8N3X6 602 aa23.04■■□□□ 1.28
TRAPPC3-204ENST00000373166 MMP19Q99542 508 aa23.04■■□□□ 1.28
TRAPPC3-204ENST00000373166 PAG1Q9NWQ8 432 aa23.04■■□□□ 1.28
TRAPPC3-204ENST00000373166 LTBP2Q14767 1821 aa23.03■■□□□ 1.28
TRAPPC3-204ENST00000373166 TCRBV5S4A2TA0A5A2 114 aa23.03■■□□□ 1.28
TRAPPC3-204ENST00000373166 CLTBP09497 229 aa23.03■■□□□ 1.28
TRAPPC3-204ENST00000373166 FOSL2P15408 326 aa23.03■■□□□ 1.28
TRAPPC3-204ENST00000373166 AAMPQ13685 434 aa23.03■■□□□ 1.28
TRAPPC3-204ENST00000373166 DYNLL2Q96FJ2 89 aa23.03■■□□□ 1.28
TRAPPC3-204ENST00000373166 CCDC17Q96LX7 622 aa23.03■■□□□ 1.28
TRAPPC3-204ENST00000373166 HAUS7Q99871 368 aa23.03■■□□□ 1.28
TRAPPC3-204ENST00000373166 ECHDC1Q9NTX5 307 aa23.03■■□□□ 1.28
TRAPPC3-204ENST00000373166 RLFQ13129 1914 aa23.02■■□□□ 1.28
TRAPPC3-204ENST00000373166 SPTBN5Q9NRC6 3674 aaKnown RBP23.02■■□□□ 1.28
TRAPPC3-204ENST00000373166 TMEM265A0A087WTH1 108 aa23.02■■□□□ 1.28
TRAPPC3-204ENST00000373166 AKR1B1P15121 316 aa23.02■■□□□ 1.28
TRAPPC3-204ENST00000373166 KCTD2Q14681 263 aa23.02■■□□□ 1.28
TRAPPC3-204ENST00000373166 CLEC10AQ8IUN9 316 aa23.02■■□□□ 1.28
TRAPPC3-204ENST00000373166 RNPC3Q96LT9 517 aaKnown RBP23.02■■□□□ 1.28
TRAPPC3-204ENST00000373166 TINF2Q9BSI4 451 aa23.02■■□□□ 1.28
TRAPPC3-204ENST00000373166 ATP8A2Q9NTI2 1148 aa23.02■■□□□ 1.28
TRAPPC3-204ENST00000373166 DIS3Q9Y2L1 958 aaKnown RBP23.02■■□□□ 1.28
TRAPPC3-204ENST00000373166 CDH23Q9H251 3354 aa23.01■■□□□ 1.27
TRAPPC3-204ENST00000373166 PGK1P00558 417 aa23.01■■□□□ 1.27
TRAPPC3-204ENST00000373166 RAG1P15918 1043 aa23.01■■□□□ 1.27
TRAPPC3-204ENST00000373166 AMOTL1Q8IY63 956 aa23.01■■□□□ 1.27
TRAPPC3-204ENST00000373166 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.01■■□□□ 1.27
TRAPPC3-204ENST00000373166 ARMT1Q9H993 441 aa23.01■■□□□ 1.27
TRAPPC3-204ENST00000373166 ADAMTS5Q9UNA0 930 aa23.01■■□□□ 1.27
TRAPPC3-204ENST00000373166 PRUNE2Q8WUY3 3088 aa23.01■■□□□ 1.27
TRAPPC3-204ENST00000373166 KIAA0355O15063 1070 aa23■■□□□ 1.27
TRAPPC3-204ENST00000373166 PGK2P07205 417 aa23■■□□□ 1.27
TRAPPC3-204ENST00000373166 ITGB8P26012 769 aa23■■□□□ 1.27
TRAPPC3-204ENST00000373166 RIOX2Q8IUF8 465 aa23■■□□□ 1.27
TRAPPC3-204ENST00000373166 ZBTB47Q9UFB7 747 aaPredicted RBP23■■□□□ 1.27
TRAPPC3-204ENST00000373166 A0A0G2JMZ2 1700 aa22.99■■□□□ 1.27
TRAPPC3-204ENST00000373166 A0A1W2PQ45 241 aaPredicted RBP22.99■■□□□ 1.27
TRAPPC3-204ENST00000373166 A0A1W2PQY0 241 aa22.99■■□□□ 1.27
TRAPPC3-204ENST00000373166 PQBP1O60828 265 aaKnown RBP22.99■■□□□ 1.27
TRAPPC3-204ENST00000373166 AKR1A1P14550 325 aa22.99■■□□□ 1.27
TRAPPC3-204ENST00000373166 COPB2P35606 906 aa22.99■■□□□ 1.27
TRAPPC3-204ENST00000373166 STAT3P40763 770 aa22.99■■□□□ 1.27
TRAPPC3-204ENST00000373166 ZNF792Q3KQV3 632 aa22.99■■□□□ 1.27
TRAPPC3-204ENST00000373166 SYMPKQ92797 1274 aaKnown RBP22.99■■□□□ 1.27
TRAPPC3-204ENST00000373166 TMEM39AQ9NV64 488 aa22.99■■□□□ 1.27
TRAPPC3-204ENST00000373166 PRKAB2O43741 272 aa22.98■■□□□ 1.27
TRAPPC3-204ENST00000373166 EEF2P13639 858 aaKnown RBP22.98■■□□□ 1.27
TRAPPC3-204ENST00000373166 CDK8P49336 464 aa22.98■■□□□ 1.27
TRAPPC3-204ENST00000373166 EPHB4P54760 987 aa22.98■■□□□ 1.27
TRAPPC3-204ENST00000373166 FPGSQ05932 587 aa22.98■■□□□ 1.27
TRAPPC3-204ENST00000373166 HDAC1Q13547 482 aaPredicted RBP22.98■■□□□ 1.27
TRAPPC3-204ENST00000373166 C12orf60Q5U649 245 aa22.98■■□□□ 1.27
TRAPPC3-204ENST00000373166 DDRGK1Q96HY6 314 aa22.98■■□□□ 1.27
TRAPPC3-204ENST00000373166 KANSL2Q9H9L4 492 aa22.98■■□□□ 1.27
TRAPPC3-204ENST00000373166 GOPCQ9HD26 462 aa22.98■■□□□ 1.27
TRAPPC3-204ENST00000373166 FBXO28Q9NVF7 368 aa22.98■■□□□ 1.27
TRAPPC3-204ENST00000373166 CNPY2Q9Y2B0 182 aa22.98■■□□□ 1.27
TRAPPC3-204ENST00000373166 NAV1Q8NEY1 1877 aa22.98■■□□□ 1.27
TRAPPC3-204ENST00000373166 MYH7P12883 1935 aa22.98■■□□□ 1.27
TRAPPC3-204ENST00000373166 VWA5AO00534 786 aa22.97■■□□□ 1.27
TRAPPC3-204ENST00000373166 MBD4O95243 580 aa22.97■■□□□ 1.27
TRAPPC3-204ENST00000373166 ZNF865P0CJ78 1059 aaPredicted RBP22.97■■□□□ 1.27
TRAPPC3-204ENST00000373166 TAL1P17542 331 aaPredicted RBP22.97■■□□□ 1.27
TRAPPC3-204ENST00000373166 TSEN34Q9BSV6 310 aaKnown RBP22.97■■□□□ 1.27
TRAPPC3-204ENST00000373166 PPP1R9AQ9ULJ8 1098 aa22.97■■□□□ 1.27
TRAPPC3-204ENST00000373166 ROBO3Q96MS0 1386 aa22.97■■□□□ 1.27
TRAPPC3-204ENST00000373166 DCDC2CA8MYV0 355 aa22.96■■□□□ 1.27
TRAPPC3-204ENST00000373166 USP17L12C9JPN9 530 aa22.96■■□□□ 1.27
TRAPPC3-204ENST00000373166 USP17L21D6R901 530 aa22.96■■□□□ 1.27
TRAPPC3-204ENST00000373166 ADD2P35612 726 aa22.96■■□□□ 1.27
TRAPPC3-204ENST00000373166 ZSCAN25Q6NSZ9 544 aa22.96■■□□□ 1.27
TRAPPC3-204ENST00000373166 C16orf86Q6ZW13 317 aa22.96■■□□□ 1.27
TRAPPC3-204ENST00000373166 ANKRD33Q7Z3H0 272 aa22.96■■□□□ 1.27
TRAPPC3-204ENST00000373166 NUP133Q8WUM0 1156 aa22.96■■□□□ 1.27
TRAPPC3-204ENST00000373166 TOX2Q96NM4 488 aa22.96■■□□□ 1.27
TRAPPC3-204ENST00000373166 ZNF214Q9UL59 606 aaPredicted RBP22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms