RNA–Protein interactions for RNA: ENST00000372898.6

SWI5-202, Transcript of SWI5 homologous recombination repair protein, humanhuman

APPRIS ALT2 TSL 5

Gene SWI5, Length 699 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SWI5-202ENST00000372898 INHBEP58166 350 aa17.04■□□□□ 0.32
SWI5-202ENST00000372898 MOGSQ13724 837 aa17.04■□□□□ 0.32
SWI5-202ENST00000372898 FAM83BQ5T0W9 1011 aa17.04■□□□□ 0.32
SWI5-202ENST00000372898 RASGRP2Q7LDG7 609 aa17.04■□□□□ 0.32
SWI5-202ENST00000372898 MICU3Q86XE3 530 aa17.04■□□□□ 0.32
SWI5-202ENST00000372898 GMCL1Q96IK5 515 aa17.04■□□□□ 0.32
SWI5-202ENST00000372898 NUP88Q99567 741 aaPredicted RBP17.04■□□□□ 0.32
SWI5-202ENST00000372898 LARP6Q9BRS8 491 aaKnown RBP17.04■□□□□ 0.32
SWI5-202ENST00000372898 TANGO6Q9C0B7 1094 aa17.04■□□□□ 0.32
SWI5-202ENST00000372898 RPAP3Q9H6T3 665 aaPredicted RBP17.04■□□□□ 0.32
SWI5-202ENST00000372898 AGTPBP1Q9UPW5 1226 aa17.04■□□□□ 0.32
SWI5-202ENST00000372898 TESPA1A2RU30 521 aaPredicted RBP17.03■□□□□ 0.32
SWI5-202ENST00000372898 PARP1P09874 1014 aaKnown RBP17.03■□□□□ 0.32
SWI5-202ENST00000372898 SNHG28P0DPA3 235 aa17.03■□□□□ 0.32
SWI5-202ENST00000372898 ZNF543Q08ER8 600 aa17.03■□□□□ 0.32
SWI5-202ENST00000372898 TROAPQ12815 778 aa17.03■□□□□ 0.32
SWI5-202ENST00000372898 PABPC4Q13310 644 aaKnown RBP eCLIP17.03■□□□□ 0.321e-8■■■■■ 65.5
SWI5-202ENST00000372898 GRM4Q14833 912 aa17.03■□□□□ 0.32
SWI5-202ENST00000372898 ASPRV1Q53RT3 343 aa17.03■□□□□ 0.32
SWI5-202ENST00000372898 TREML2Q5T2D2 321 aa17.03■□□□□ 0.32
SWI5-202ENST00000372898 RAB11FIP4Q86YS3 637 aa17.03■□□□□ 0.32
SWI5-202ENST00000372898 CTCFLQ8NI51 663 aaPredicted RBP17.03■□□□□ 0.32
SWI5-202ENST00000372898 ZIC5Q96T25 663 aa17.03■□□□□ 0.32
SWI5-202ENST00000372898 FRMPD2Q68DX3 1309 aaPredicted RBP17.02■□□□□ 0.32
SWI5-202ENST00000372898 GOLGA8AA7E2F4 631 aa17.02■□□□□ 0.32
SWI5-202ENST00000372898 USP17L15C9J2P7 530 aa17.02■□□□□ 0.32
SWI5-202ENST00000372898 BTBD19C9JJ37 291 aa17.02■□□□□ 0.32
SWI5-202ENST00000372898 USP17L13C9JLJ4 530 aa17.02■□□□□ 0.32
SWI5-202ENST00000372898 USP17L11C9JVI0 530 aa17.02■□□□□ 0.32
SWI5-202ENST00000372898 USP17L18D6R9N7 530 aa17.02■□□□□ 0.32
SWI5-202ENST00000372898 USP17L22D6RA61 530 aa17.02■□□□□ 0.32
SWI5-202ENST00000372898 USP17L17D6RBQ6 530 aa17.02■□□□□ 0.32
SWI5-202ENST00000372898 USP17L19D6RCP7 530 aa17.02■□□□□ 0.32
SWI5-202ENST00000372898 USP17L20D6RJB6 530 aa17.02■□□□□ 0.32
SWI5-202ENST00000372898 RXRAP19793 462 aa17.02■□□□□ 0.32
SWI5-202ENST00000372898 KIF5BP33176 963 aa17.02■□□□□ 0.32
SWI5-202ENST00000372898 MAP2K2P36507 400 aa17.02■□□□□ 0.32
SWI5-202ENST00000372898 RCAN1P53805 252 aa17.02■□□□□ 0.32
SWI5-202ENST00000372898 EVCP57679 992 aa17.02■□□□□ 0.32
SWI5-202ENST00000372898 USP17L24Q0WX57 530 aa17.02■□□□□ 0.32
SWI5-202ENST00000372898 IKQ13123 557 aaPredicted RBP17.02■□□□□ 0.32
SWI5-202ENST00000372898 GPATCH4Q5T3I0 446 aaKnown RBP17.02■□□□□ 0.32
SWI5-202ENST00000372898 OTUD7BQ6GQQ9 843 aa17.02■□□□□ 0.32
SWI5-202ENST00000372898 GPAT2Q6NUI2 795 aa17.02■□□□□ 0.32
SWI5-202ENST00000372898 KCTD1Q719H9 257 aa17.02■□□□□ 0.32
SWI5-202ENST00000372898 ANKRD23Q86SG2 305 aa17.02■□□□□ 0.32
SWI5-202ENST00000372898 CCDC144CPQ8IYA2 1237 aa17.02■□□□□ 0.32
SWI5-202ENST00000372898 REM2Q8IYK8 340 aaPredicted RBP17.02■□□□□ 0.32
SWI5-202ENST00000372898 MAP3K14Q99558 947 aa17.02■□□□□ 0.32
SWI5-202ENST00000372898 GPCPD1Q9NPB8 672 aa17.02■□□□□ 0.32
SWI5-202ENST00000372898 TMEM232C9JQI7 657 aa17.01■□□□□ 0.31
SWI5-202ENST00000372898 METAP2P50579 478 aaKnown RBP eCLIP17.01■□□□□ 0.31
SWI5-202ENST00000372898 IRX3P78415 501 aaPredicted RBP17.01■□□□□ 0.31
SWI5-202ENST00000372898 RTN1Q16799 776 aa17.01■□□□□ 0.31
SWI5-202ENST00000372898 ZNF274Q96GC6 653 aaPredicted RBP17.01■□□□□ 0.31
SWI5-202ENST00000372898 PTPN18Q99952 460 aa17.01■□□□□ 0.31
SWI5-202ENST00000372898 LIMCH1Q9UPQ0 1083 aa17.01■□□□□ 0.31
SWI5-202ENST00000372898 PDHXO00330 501 aa17■□□□□ 0.31
SWI5-202ENST00000372898 FLOT1O75955 427 aa17■□□□□ 0.31
SWI5-202ENST00000372898 GOLGA8HP0CJ92 632 aa17■□□□□ 0.31
SWI5-202ENST00000372898 OSBPP22059 807 aa17■□□□□ 0.31
SWI5-202ENST00000372898 PDIA3P30101 505 aaKnown RBP17■□□□□ 0.31
SWI5-202ENST00000372898 HOXA7P31268 230 aaPredicted RBP17■□□□□ 0.31
SWI5-202ENST00000372898 TM4SF4P48230 202 aa17■□□□□ 0.31
SWI5-202ENST00000372898 MCM2P49736 904 aa17■□□□□ 0.31
SWI5-202ENST00000372898 STAT2P52630 851 aa17■□□□□ 0.31
SWI5-202ENST00000372898 SAMD1Q6SPF0 538 aaPredicted RBP17■□□□□ 0.31
SWI5-202ENST00000372898 CATSPERGQ6ZRH7 1159 aa17■□□□□ 0.31
SWI5-202ENST00000372898 IFNL1Q8IU54 200 aa17■□□□□ 0.31
SWI5-202ENST00000372898 FAM43AQ8N2R8 423 aa17■□□□□ 0.31
SWI5-202ENST00000372898 FANCBQ8NB91 859 aa17■□□□□ 0.31
SWI5-202ENST00000372898 CHURC1Q8WUH1 139 aa17■□□□□ 0.31
SWI5-202ENST00000372898 ZCCHC17Q9NP64 241 aaKnown RBP17■□□□□ 0.31
SWI5-202ENST00000372898 FEM1BQ9UK73 627 aa17■□□□□ 0.31
SWI5-202ENST00000372898 PNMA3Q9UL41 463 aa17■□□□□ 0.31
SWI5-202ENST00000372898 TPCN1Q9ULQ1 816 aa17■□□□□ 0.31
SWI5-202ENST00000372898 SLC45A1Q9Y2W3 748 aa17■□□□□ 0.31
SWI5-202ENST00000372898 PALM3A6NDB9 673 aaPredicted RBP16.99■□□□□ 0.31
SWI5-202ENST00000372898 KLRF2D3W0D1 207 aa16.99■□□□□ 0.31
SWI5-202ENST00000372898 IGF2BP3O00425 579 aaKnown RBP eCLIP16.99■□□□□ 0.31
SWI5-202ENST00000372898 GNAQP50148 359 aa16.99■□□□□ 0.31
SWI5-202ENST00000372898 CCT2P78371 535 aaKnown RBP16.99■□□□□ 0.31
SWI5-202ENST00000372898 STK3Q13188 491 aa16.99■□□□□ 0.31
SWI5-202ENST00000372898 PPP2R5BQ15173 497 aa16.99■□□□□ 0.31
SWI5-202ENST00000372898 TTBK2Q6IQ55 1244 aa16.99■□□□□ 0.31
SWI5-202ENST00000372898 FAM160B2Q86V87 743 aa16.99■□□□□ 0.31
SWI5-202ENST00000372898 STAG2Q8N3U4 1231 aa16.99■□□□□ 0.31
SWI5-202ENST00000372898 ZSCAN31Q96LW9 406 aaPredicted RBP16.99■□□□□ 0.31
SWI5-202ENST00000372898 ASCC2Q9H1I8 757 aaPredicted RBP16.99■□□□□ 0.31
SWI5-202ENST00000372898 SLKQ9H2G2 1235 aaPredicted RBP16.99■□□□□ 0.31
SWI5-202ENST00000372898 FBXO28Q9NVF7 368 aa16.99■□□□□ 0.31
SWI5-202ENST00000372898 RBM28Q9NW13 759 aaKnown RBP16.99■□□□□ 0.31
SWI5-202ENST00000372898 MAD2L2Q9UI95 211 aa16.99■□□□□ 0.31
SWI5-202ENST00000372898 HPS5Q9UPZ3 1129 aa16.99■□□□□ 0.31
SWI5-202ENST00000372898 NID2Q14112 1375 aa16.99■□□□□ 0.31
SWI5-202ENST00000372898 A0A0G2JMZ2 1700 aa16.99■□□□□ 0.31
SWI5-202ENST00000372898 CCDC196A0A1B0GTZ2 297 aa16.98■□□□□ 0.31
SWI5-202ENST00000372898 PLA2G6O60733 806 aa16.98■□□□□ 0.31
SWI5-202ENST00000372898 CD2BP2O95400 341 aaKnown RBP16.98■□□□□ 0.31
SWI5-202ENST00000372898 COG2Q14746 738 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms