RNA–Protein interactions for RNA: ENST00000372857.7

PABPC4-202, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 1 (best) BASIC

Gene PABPC4, Length 3,048 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-202ENST00000372857 AATFQ9NY61 560 aaKnown RBP eCLIP17.8■□□□□ 0.44
PABPC4-202ENST00000372857 SAMM50Q9Y512 469 aa17.8■□□□□ 0.44
PABPC4-202ENST00000372857 TTC26A0AVF1 554 aa17.8■□□□□ 0.44
PABPC4-202ENST00000372857 PDE2AO00408 941 aaPredicted RBP17.8■□□□□ 0.44
PABPC4-202ENST00000372857 PSMD14O00487 310 aa17.8■□□□□ 0.44
PABPC4-202ENST00000372857 LIFRP42702 1097 aa17.8■□□□□ 0.44
PABPC4-202ENST00000372857 HERVK_113P62684 666 aa17.8■□□□□ 0.44
PABPC4-202ENST00000372857 IFIT5Q13325 482 aaKnown RBP17.8■□□□□ 0.44
PABPC4-202ENST00000372857 TCIRG1Q13488 830 aa17.8■□□□□ 0.44
PABPC4-202ENST00000372857 CNNM1Q9NRU3 951 aa17.8■□□□□ 0.44
PABPC4-202ENST00000372857 LIMA1Q9UHB6 759 aaKnown RBP17.8■□□□□ 0.44
PABPC4-202ENST00000372857 SHOX2O60902 331 aaPredicted RBP17.79■□□□□ 0.44
PABPC4-202ENST00000372857 MCM3P25205 808 aa17.79■□□□□ 0.44
PABPC4-202ENST00000372857 KIF6Q6ZMV9 814 aa17.79■□□□□ 0.44
PABPC4-202ENST00000372857 LAMB4A4D0S4 1761 aa17.79■□□□□ 0.44
PABPC4-202ENST00000372857 ALS2Q96Q42 1657 aa17.79■□□□□ 0.44
PABPC4-202ENST00000372857 PDE6AP16499 860 aa17.79■□□□□ 0.44
PABPC4-202ENST00000372857 TTF1Q15361 905 aaPredicted RBP17.79■□□□□ 0.44
PABPC4-202ENST00000372857 TCP11X2Q5H9J9 407 aa17.79■□□□□ 0.44
PABPC4-202ENST00000372857 KIAA1328Q86T90 577 aa17.79■□□□□ 0.44
PABPC4-202ENST00000372857 CRACR2BQ8N4Y2 399 aaPredicted RBP17.79■□□□□ 0.44
PABPC4-202ENST00000372857 NAPBQ9H115 298 aa17.79■□□□□ 0.44
PABPC4-202ENST00000372857 EPB41L4AQ9HCS5 686 aaPredicted RBP17.79■□□□□ 0.44
PABPC4-202ENST00000372857 ERVV-2B6SEH9 535 aa17.78■□□□□ 0.44
PABPC4-202ENST00000372857 PRDM1O75626 825 aa17.78■□□□□ 0.44
PABPC4-202ENST00000372857 DEXIO95424 95 aa17.78■□□□□ 0.44
PABPC4-202ENST00000372857 MNAT1P51948 309 aa17.78■□□□□ 0.44
PABPC4-202ENST00000372857 GNGT1P63211 74 aa17.78■□□□□ 0.44
PABPC4-202ENST00000372857 ZNF174Q15697 407 aa17.78■□□□□ 0.44
PABPC4-202ENST00000372857 CCNI2Q6ZMN8 369 aaPredicted RBP17.78■□□□□ 0.44
PABPC4-202ENST00000372857 SHISA4Q96DD7 197 aa17.78■□□□□ 0.44
PABPC4-202ENST00000372857 RRP36Q96EU6 259 aaKnown RBP17.78■□□□□ 0.44
PABPC4-202ENST00000372857 HAUS4Q9H6D7 363 aa17.78■□□□□ 0.44
PABPC4-202ENST00000372857 ZBTB1Q9Y2K1 713 aa17.78■□□□□ 0.44
PABPC4-202ENST00000372857 TJP1Q07157 1748 aa17.78■□□□□ 0.44
PABPC4-202ENST00000372857 ITGA6P23229 1130 aa17.78■□□□□ 0.44
PABPC4-202ENST00000372857 FKBP15Q5T1M5 1219 aa17.78■□□□□ 0.44
PABPC4-202ENST00000372857 NELFBQ8WX92 580 aa17.78■□□□□ 0.44
PABPC4-202ENST00000372857 CAPS2Q9BXY5 557 aa17.78■□□□□ 0.44
PABPC4-202ENST00000372857 EZH2Q15910 746 aaKnown RBP17.77■□□□□ 0.44
PABPC4-202ENST00000372857 CT47A1Q5JQC4 288 aaPredicted RBP17.77■□□□□ 0.44
PABPC4-202ENST00000372857 SND1Q7KZF4 910 aaKnown RBP eCLIP17.77■□□□□ 0.44
PABPC4-202ENST00000372857 ANKRD20A12PQ8NF67 263 aa17.77■□□□□ 0.44
PABPC4-202ENST00000372857 STRBPQ96SI9 672 aaKnown RBP17.77■□□□□ 0.44
PABPC4-202ENST00000372857 IQSEC3Q9UPP2 1182 aaPredicted RBP17.77■□□□□ 0.44
PABPC4-202ENST00000372857 DUSP10Q9Y6W6 482 aa17.77■□□□□ 0.44
PABPC4-202ENST00000372857 XDHP47989 1333 aa17.77■□□□□ 0.44
PABPC4-202ENST00000372857 PAK1Q13153 545 aa17.77■□□□□ 0.44
PABPC4-202ENST00000372857 WTAPQ15007 396 aa17.77■□□□□ 0.44
PABPC4-202ENST00000372857 ACSBG1Q96GR2 724 aa17.77■□□□□ 0.44
PABPC4-202ENST00000372857 LACRTQ9GZZ8 138 aa17.77■□□□□ 0.44
PABPC4-202ENST00000372857 FAM107BQ9H098 131 aa17.77■□□□□ 0.44
PABPC4-202ENST00000372857 JADE2Q9NQC1 790 aa17.77■□□□□ 0.44
PABPC4-202ENST00000372857 TRMT112Q9UI30 125 aaKnown RBP17.77■□□□□ 0.44
PABPC4-202ENST00000372857 STRCP1A6NGW2 1772 aa17.77■□□□□ 0.43
PABPC4-202ENST00000372857 RCCD1A6NED2 376 aa17.77■□□□□ 0.43
PABPC4-202ENST00000372857 HNRNPH1P31943 449 aaKnown RBP17.77■□□□□ 0.43
PABPC4-202ENST00000372857 TRIM14Q14142 442 aa17.77■□□□□ 0.43
PABPC4-202ENST00000372857 OR8K1Q8NGG5 319 aa17.77■□□□□ 0.43
PABPC4-202ENST00000372857 HDAC7Q8WUI4 952 aa17.77■□□□□ 0.43
PABPC4-202ENST00000372857 SLC4A9Q96Q91 983 aa17.77■□□□□ 0.43
PABPC4-202ENST00000372857 POLD4Q9HCU8 107 aa17.77■□□□□ 0.43
PABPC4-202ENST00000372857 MACROD2A1Z1Q3 448 aa17.76■□□□□ 0.43
PABPC4-202ENST00000372857 TARSL2A2RTX5 802 aaKnown RBP17.76■□□□□ 0.43
PABPC4-202ENST00000372857 TRIM49BA6NDI0 452 aa17.76■□□□□ 0.43
PABPC4-202ENST00000372857 PAPD7Q5XG87 772 aaKnown RBP17.76■□□□□ 0.43
PABPC4-202ENST00000372857 KCNV1Q6PIU1 500 aa17.76■□□□□ 0.43
PABPC4-202ENST00000372857 IFNL3Q8IZI9 196 aa17.76■□□□□ 0.43
PABPC4-202ENST00000372857 GDAQ9Y2T3 454 aa17.76■□□□□ 0.43
PABPC4-202ENST00000372857 LRRC10BA6NIK2 292 aa17.76■□□□□ 0.43
PABPC4-202ENST00000372857 CKAP4Q07065 602 aaKnown RBP17.76■□□□□ 0.43
PABPC4-202ENST00000372857 PPARAQ07869 468 aa17.76■□□□□ 0.43
PABPC4-202ENST00000372857 PPFIA1Q13136 1202 aa17.76■□□□□ 0.43
PABPC4-202ENST00000372857 MFSD6Q6ZSS7 791 aa17.76■□□□□ 0.43
PABPC4-202ENST00000372857 ARMT1Q9H993 441 aa17.76■□□□□ 0.43
PABPC4-202ENST00000372857 LUC7L2Q9Y383 392 aaKnown RBP17.76■□□□□ 0.43
PABPC4-202ENST00000372857 PRKAB2O43741 272 aa17.75■□□□□ 0.43
PABPC4-202ENST00000372857 MBD4O95243 580 aa17.75■□□□□ 0.43
PABPC4-202ENST00000372857 EP400NLQ6ZTU2 488 aa17.75■□□□□ 0.43
PABPC4-202ENST00000372857 SMIM5Q71RC9 77 aa17.75■□□□□ 0.43
PABPC4-202ENST00000372857 EEF2KMTQ96G04 330 aa17.75■□□□□ 0.43
PABPC4-202ENST00000372857 ISCA1Q9BUE6 129 aa17.75■□□□□ 0.43
PABPC4-202ENST00000372857 SHTN1A0MZ66 631 aa17.75■□□□□ 0.43
PABPC4-202ENST00000372857 IDEP14735 1019 aa17.75■□□□□ 0.43
PABPC4-202ENST00000372857 MATR3P43243 847 aaKnown RBP eCLIP17.75■□□□□ 0.43
PABPC4-202ENST00000372857 PHKA1P46020 1223 aa17.75■□□□□ 0.43
PABPC4-202ENST00000372857 AKNAD1Q5T1N1 836 aa17.75■□□□□ 0.43
PABPC4-202ENST00000372857 WDR59Q6PJI9 974 aa17.75■□□□□ 0.43
PABPC4-202ENST00000372857 CARD10Q9BWT7 1032 aa17.75■□□□□ 0.43
PABPC4-202ENST00000372857 RWDD2AQ9UIY3 292 aa17.75■□□□□ 0.43
PABPC4-202ENST00000372857 GRIN2DO15399 1336 aa17.75■□□□□ 0.43
PABPC4-202ENST00000372857 KDM4FA0A1W2PPD8 638 aa17.74■□□□□ 0.43
PABPC4-202ENST00000372857 INPP5BP32019 993 aa17.74■□□□□ 0.43
PABPC4-202ENST00000372857 UBE3CQ15386 1083 aa17.74■□□□□ 0.43
PABPC4-202ENST00000372857 CCDC91Q7Z6B0 441 aa17.74■□□□□ 0.43
PABPC4-202ENST00000372857 FANCBQ8NB91 859 aa17.74■□□□□ 0.43
PABPC4-202ENST00000372857 AKAP11Q9UKA4 1901 aa17.74■□□□□ 0.43
PABPC4-202ENST00000372857 EIF3HO15372 352 aaKnown RBP eCLIP17.74■□□□□ 0.437e-7■■■□□ 16.9
PABPC4-202ENST00000372857 SLC7A5Q01650 507 aa17.74■□□□□ 0.43
PABPC4-202ENST00000372857 CYP27A1Q02318 531 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms