RNA–Protein interactions for RNA: ENST00000372097.9

GTF3C5-202, Transcript of general transcription factor IIIC subunit 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C5, Length 2,406 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-202ENST00000372097 VPS54Q9P1Q0 977 aa21.67■■□□□ 1.06
GTF3C5-202ENST00000372097 PPFIA4O75335 1185 aa21.67■■□□□ 1.06
GTF3C5-202ENST00000372097 CTSWP56202 376 aa21.67■■□□□ 1.06
GTF3C5-202ENST00000372097 AKAP17AQ02040 695 aaKnown RBP21.67■■□□□ 1.06
GTF3C5-202ENST00000372097 PKN1Q16512 942 aa21.67■■□□□ 1.06
GTF3C5-202ENST00000372097 PACS2Q86VP3 889 aa21.67■■□□□ 1.06
GTF3C5-202ENST00000372097 HPCAL4Q9UM19 191 aa21.67■■□□□ 1.06
GTF3C5-202ENST00000372097 BMP15O95972 392 aa21.66■■□□□ 1.06
GTF3C5-202ENST00000372097 E2F4Q16254 413 aa21.66■■□□□ 1.06
GTF3C5-202ENST00000372097 RRAGBQ5VZM2 374 aa21.66■■□□□ 1.06
GTF3C5-202ENST00000372097 AFAP1L1Q8TED9 768 aa21.66■■□□□ 1.06
GTF3C5-202ENST00000372097 MMS19Q96T76 1030 aa21.66■■□□□ 1.06
GTF3C5-202ENST00000372097 HDAC6Q9UBN7 1215 aa21.66■■□□□ 1.06
GTF3C5-202ENST00000372097 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.66■■□□□ 1.06
GTF3C5-202ENST00000372097 A0A0G2JS52 829 aa21.66■■□□□ 1.06
GTF3C5-202ENST00000372097 KCNJ18B7U540 433 aa21.66■■□□□ 1.06
GTF3C5-202ENST00000372097 ENC1O14682 589 aa21.66■■□□□ 1.06
GTF3C5-202ENST00000372097 MCM3P25205 808 aa21.66■■□□□ 1.06
GTF3C5-202ENST00000372097 KRT2P35908 639 aa21.66■■□□□ 1.06
GTF3C5-202ENST00000372097 MAP3K12Q12852 859 aa21.66■■□□□ 1.06
GTF3C5-202ENST00000372097 KCNJ12Q14500 433 aa21.66■■□□□ 1.06
GTF3C5-202ENST00000372097 SPATA5Q8NB90 893 aa21.66■■□□□ 1.06
GTF3C5-202ENST00000372097 BLZF1Q9H2G9 400 aa21.66■■□□□ 1.06
GTF3C5-202ENST00000372097 HAUS4Q9H6D7 363 aa21.66■■□□□ 1.06
GTF3C5-202ENST00000372097 XBP1P17861 261 aa21.65■■□□□ 1.06
GTF3C5-202ENST00000372097 PAK1Q13153 545 aa21.65■■□□□ 1.06
GTF3C5-202ENST00000372097 MYH8P13535 1937 aa21.65■■□□□ 1.06
GTF3C5-202ENST00000372097 DISP2A7MBM2 1401 aa21.65■■□□□ 1.06
GTF3C5-202ENST00000372097 TDO2P48775 406 aa21.65■■□□□ 1.06
GTF3C5-202ENST00000372097 TTC31Q49AM3 519 aaPredicted RBP21.65■■□□□ 1.06
GTF3C5-202ENST00000372097 MAP9Q49MG5 647 aa21.65■■□□□ 1.06
GTF3C5-202ENST00000372097 PAPD7Q5XG87 772 aaKnown RBP21.65■■□□□ 1.06
GTF3C5-202ENST00000372097 ANKRD20A12PQ8NF67 263 aa21.65■■□□□ 1.06
GTF3C5-202ENST00000372097 COG1Q8WTW3 980 aa21.65■■□□□ 1.06
GTF3C5-202ENST00000372097 MTRQ99707 1265 aa21.65■■□□□ 1.06
GTF3C5-202ENST00000372097 SAR1BQ9Y6B6 198 aa21.65■■□□□ 1.06
GTF3C5-202ENST00000372097 TARSL2A2RTX5 802 aaKnown RBP21.64■■□□□ 1.05
GTF3C5-202ENST00000372097 ATP1A1P05023 1023 aaKnown RBP21.64■■□□□ 1.05
GTF3C5-202ENST00000372097 ZNF174Q15697 407 aa21.64■■□□□ 1.05
GTF3C5-202ENST00000372097 DZIP3Q86Y13 1208 aaKnown RBP21.64■■□□□ 1.05
GTF3C5-202ENST00000372097 RNF216Q9NWF9 866 aaPredicted RBP21.64■■□□□ 1.05
GTF3C5-202ENST00000372097 OR8K1Q8NGG5 319 aa21.64■■□□□ 1.05
GTF3C5-202ENST00000372097 NELFBQ8WX92 580 aa21.64■■□□□ 1.05
GTF3C5-202ENST00000372097 PPM1EQ8WY54 764 aa21.64■■□□□ 1.05
GTF3C5-202ENST00000372097 LPIN2Q92539 896 aa21.64■■□□□ 1.05
GTF3C5-202ENST00000372097 NACAP1Q9BZK3 213 aa21.64■■□□□ 1.05
GTF3C5-202ENST00000372097 PLEKHA4Q9H4M7 779 aa21.64■■□□□ 1.05
GTF3C5-202ENST00000372097 TTC26A0AVF1 554 aa21.63■■□□□ 1.05
GTF3C5-202ENST00000372097 FGFR2P21802 821 aa21.63■■□□□ 1.05
GTF3C5-202ENST00000372097 UBXN1Q04323 297 aa21.63■■□□□ 1.05
GTF3C5-202ENST00000372097 FUT2Q10981 343 aa21.63■■□□□ 1.05
GTF3C5-202ENST00000372097 PPP2R5BQ15173 497 aa21.63■■□□□ 1.05
GTF3C5-202ENST00000372097 ICE2Q659A1 982 aa21.63■■□□□ 1.05
GTF3C5-202ENST00000372097 PDXDC2PQ6P474 469 aa21.63■■□□□ 1.05
GTF3C5-202ENST00000372097 LCORLQ8N3X6 602 aa21.63■■□□□ 1.05
GTF3C5-202ENST00000372097 SLC4A4Q9Y6R1 1079 aa21.63■■□□□ 1.05
GTF3C5-202ENST00000372097 CHD4Q14839 1912 aa21.63■■□□□ 1.05
GTF3C5-202ENST00000372097 ANKRD65E5RJM6 399 aa21.63■■□□□ 1.05
GTF3C5-202ENST00000372097 SRGAP2O75044 1071 aa21.63■■□□□ 1.05
GTF3C5-202ENST00000372097 HERVK_113P62684 666 aa21.63■■□□□ 1.05
GTF3C5-202ENST00000372097 ATP2C1P98194 919 aaPredicted RBP21.63■■□□□ 1.05
GTF3C5-202ENST00000372097 RASGRF1Q13972 1273 aa21.63■■□□□ 1.05
GTF3C5-202ENST00000372097 PUM3Q15397 648 aaKnown RBP21.63■■□□□ 1.05
GTF3C5-202ENST00000372097 SEC23AQ15436 765 aa21.63■■□□□ 1.05
GTF3C5-202ENST00000372097 TNFRSF25Q93038 417 aa21.63■■□□□ 1.05
GTF3C5-202ENST00000372097 DNAJC7Q99615 494 aa21.63■■□□□ 1.05
GTF3C5-202ENST00000372097 UBAC1Q9BSL1 405 aa21.63■■□□□ 1.05
GTF3C5-202ENST00000372097 PRDM1O75626 825 aa21.62■■□□□ 1.05
GTF3C5-202ENST00000372097 GNAT2P19087 354 aa21.62■■□□□ 1.05
GTF3C5-202ENST00000372097 PTGDRQ13258 359 aa21.62■■□□□ 1.05
GTF3C5-202ENST00000372097 RIN2Q8WYP3 895 aaPredicted RBP21.62■■□□□ 1.05
GTF3C5-202ENST00000372097 RPGRIP1Q96KN7 1286 aa21.62■■□□□ 1.05
GTF3C5-202ENST00000372097 PNPLA7Q6ZV29 1317 aa21.62■■□□□ 1.05
GTF3C5-202ENST00000372097 GTPBP6O43824 516 aaPredicted RBP21.61■■□□□ 1.05
GTF3C5-202ENST00000372097 STIM1Q13586 685 aa21.61■■□□□ 1.05
GTF3C5-202ENST00000372097 ZNF658Q5TYW1 1059 aaPredicted RBP21.61■■□□□ 1.05
GTF3C5-202ENST00000372097 IRF2BP1Q8IU81 584 aa21.61■■□□□ 1.05
GTF3C5-202ENST00000372097 HELBQ8NG08 1087 aaPredicted RBP21.61■■□□□ 1.05
GTF3C5-202ENST00000372097 RNF41Q9H4P4 317 aaPredicted RBP21.61■■□□□ 1.05
GTF3C5-202ENST00000372097 NUP98P52948 1817 aa21.61■■□□□ 1.05
GTF3C5-202ENST00000372097 hCG_1642624A0A1W2PR95 340 aa21.61■■□□□ 1.05
GTF3C5-202ENST00000372097 PRPF3O43395 683 aaKnown RBP21.61■■□□□ 1.05
GTF3C5-202ENST00000372097 PDE8AO60658 829 aa21.61■■□□□ 1.05
GTF3C5-202ENST00000372097 NPY5RQ15761 445 aa21.61■■□□□ 1.05
GTF3C5-202ENST00000372097 TTC38Q5R3I4 469 aa21.61■■□□□ 1.05
GTF3C5-202ENST00000372097 WDR59Q6PJI9 974 aa21.61■■□□□ 1.05
GTF3C5-202ENST00000372097 ZNF662Q6ZS27 426 aa21.61■■□□□ 1.05
GTF3C5-202ENST00000372097 TFR2Q9UP52 801 aa21.61■■□□□ 1.05
GTF3C5-202ENST00000372097 DNAJC21Q5F1R6 531 aaKnown RBP21.6■■□□□ 1.05
GTF3C5-202ENST00000372097 CCDC122Q5T0U0 273 aa21.6■■□□□ 1.05
GTF3C5-202ENST00000372097 LUC7L2Q9Y383 392 aaKnown RBP21.6■■□□□ 1.05
GTF3C5-202ENST00000372097 V9GY48 417 aaPredicted RBP21.6■■□□□ 1.05
GTF3C5-202ENST00000372097 TNKSO95271 1327 aa21.6■■□□□ 1.05
GTF3C5-202ENST00000372097 AGPSO00116 658 aa21.6■■□□□ 1.05
GTF3C5-202ENST00000372097 SHOX2O60902 331 aaPredicted RBP21.6■■□□□ 1.05
GTF3C5-202ENST00000372097 GGCXP38435 758 aa21.6■■□□□ 1.05
GTF3C5-202ENST00000372097 MB21D1Q8N884 522 aa21.6■■□□□ 1.05
GTF3C5-202ENST00000372097 MYH3P11055 1940 aa21.6■■□□□ 1.05
GTF3C5-202ENST00000372097 IL6STP40189 918 aaPredicted RBP21.59■■□□□ 1.05
GTF3C5-202ENST00000372097 EFCAB13Q8IY85 973 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms