RNA–Protein interactions for RNA: ENST00000371248.3

VPS37B-202, Transcript of VPS37B, ESCRT-I subunit, humanhuman

TSL 3

Gene VPS37B, Length 2,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37B-202ENST00000371248 SH2B1Q9NRF2 756 aaPredicted RBP20.54■□□□□ 0.88
VPS37B-202ENST00000371248 TMOD4Q9NZQ9 345 aa20.54■□□□□ 0.88
VPS37B-202ENST00000371248 MAD2L2Q9UI95 211 aa20.54■□□□□ 0.88
VPS37B-202ENST00000371248 ISY1Q9ULR0 285 aaKnown RBP20.54■□□□□ 0.88
VPS37B-202ENST00000371248 FRMPD2Q68DX3 1309 aaPredicted RBP20.54■□□□□ 0.88
VPS37B-202ENST00000371248 ZBTB48P10074 688 aaPredicted RBP20.54■□□□□ 0.88
VPS37B-202ENST00000371248 CDC27P30260 824 aa20.54■□□□□ 0.88
VPS37B-202ENST00000371248 SCRN1Q12765 414 aa20.54■□□□□ 0.88
VPS37B-202ENST00000371248 CCDC96Q2M329 555 aa20.54■□□□□ 0.88
VPS37B-202ENST00000371248 KCTD1Q719H9 257 aa20.54■□□□□ 0.88
VPS37B-202ENST00000371248 STAG2Q8N3U4 1231 aa20.54■□□□□ 0.88
VPS37B-202ENST00000371248 LPAR1Q92633 364 aa20.54■□□□□ 0.88
VPS37B-202ENST00000371248 A0A0G2JLL6 359 aaPredicted RBP20.53■□□□□ 0.88
VPS37B-202ENST00000371248 BMP3P12645 472 aa20.53■□□□□ 0.88
VPS37B-202ENST00000371248 ADD1P35611 737 aaKnown RBP20.53■□□□□ 0.88
VPS37B-202ENST00000371248 SNAPC2Q13487 334 aa20.53■□□□□ 0.88
VPS37B-202ENST00000371248 FAM83BQ5T0W9 1011 aa20.53■□□□□ 0.88
VPS37B-202ENST00000371248 PAXIP1Q6ZW49 1069 aaPredicted RBP20.53■□□□□ 0.88
VPS37B-202ENST00000371248 PRRT2Q7Z6L0 340 aaPredicted RBP20.53■□□□□ 0.88
VPS37B-202ENST00000371248 HHIPL1Q96JK4 782 aa20.53■□□□□ 0.88
VPS37B-202ENST00000371248 C12orf42Q96LP6 360 aa20.53■□□□□ 0.88
VPS37B-202ENST00000371248 FAM217BQ9NTX9 383 aaPredicted RBP20.53■□□□□ 0.88
VPS37B-202ENST00000371248 BAZ2BQ9UIF8 2168 aaKnown RBP20.53■□□□□ 0.88
VPS37B-202ENST00000371248 VCAM1P19320 739 aa20.52■□□□□ 0.88
VPS37B-202ENST00000371248 KIF5BP33176 963 aa20.52■□□□□ 0.88
VPS37B-202ENST00000371248 ZNF543Q08ER8 600 aa20.52■□□□□ 0.88
VPS37B-202ENST00000371248 GADL1Q6ZQY3 521 aa20.52■□□□□ 0.88
VPS37B-202ENST00000371248 GTF3C6Q969F1 213 aa20.52■□□□□ 0.88
VPS37B-202ENST00000371248 GPCPD1Q9NPB8 672 aa20.52■□□□□ 0.88
VPS37B-202ENST00000371248 NID2Q14112 1375 aa20.52■□□□□ 0.88
VPS37B-202ENST00000371248 PALM3A6NDB9 673 aaPredicted RBP20.52■□□□□ 0.87
VPS37B-202ENST00000371248 PPP2R5BQ15173 497 aa20.52■□□□□ 0.87
VPS37B-202ENST00000371248 ASPRV1Q53RT3 343 aa20.52■□□□□ 0.87
VPS37B-202ENST00000371248 CCDC83Q8IWF9 413 aa20.52■□□□□ 0.87
VPS37B-202ENST00000371248 RBM28Q9NW13 759 aaKnown RBP20.52■□□□□ 0.87
VPS37B-202ENST00000371248 LOC285556D6RIA3 1793 aa20.51■□□□□ 0.87
VPS37B-202ENST00000371248 WDR46O15213 610 aaKnown RBP20.51■□□□□ 0.87
VPS37B-202ENST00000371248 SLC10A3P09131 477 aa20.51■□□□□ 0.87
VPS37B-202ENST00000371248 GTF2A2P52657 109 aa20.51■□□□□ 0.87
VPS37B-202ENST00000371248 BECN1Q14457 450 aa20.51■□□□□ 0.87
VPS37B-202ENST00000371248 GPATCH4Q5T3I0 446 aaKnown RBP20.51■□□□□ 0.87
VPS37B-202ENST00000371248 CMTR1Q8N1G2 835 aaKnown RBP20.51■□□□□ 0.87
VPS37B-202ENST00000371248 CCDC102AQ96A19 550 aa20.51■□□□□ 0.87
VPS37B-202ENST00000371248 CCDC196A0A1B0GTZ2 297 aa20.5■□□□□ 0.87
VPS37B-202ENST00000371248 KLRF2D3W0D1 207 aa20.5■□□□□ 0.87
VPS37B-202ENST00000371248 ST3GAL1Q11201 340 aa20.5■□□□□ 0.87
VPS37B-202ENST00000371248 DEFB115Q30KQ5 88 aa20.5■□□□□ 0.87
VPS37B-202ENST00000371248 TTBK2Q6IQ55 1244 aa20.5■□□□□ 0.87
VPS37B-202ENST00000371248 MS4A4AQ96JQ5 239 aa20.5■□□□□ 0.87
VPS37B-202ENST00000371248 RPAP3Q9H6T3 665 aaPredicted RBP20.5■□□□□ 0.87
VPS37B-202ENST00000371248 TMEM232C9JQI7 657 aa20.5■□□□□ 0.87
VPS37B-202ENST00000371248 PLEKHA8P1O95397 391 aa20.5■□□□□ 0.87
VPS37B-202ENST00000371248 GRM1Q13255 1194 aa20.5■□□□□ 0.87
VPS37B-202ENST00000371248 CYP4F22Q6NT55 531 aa20.5■□□□□ 0.87
VPS37B-202ENST00000371248 FASTKD5Q7L8L6 764 aaKnown RBP20.5■□□□□ 0.87
VPS37B-202ENST00000371248 CCDC82Q8N4S0 544 aa20.5■□□□□ 0.87
VPS37B-202ENST00000371248 PROCA1Q8NCQ7 364 aaPredicted RBP20.5■□□□□ 0.87
VPS37B-202ENST00000371248 UBA5Q9GZZ9 404 aa20.5■□□□□ 0.87
VPS37B-202ENST00000371248 CPVLQ9H3G5 476 aa20.5■□□□□ 0.87
VPS37B-202ENST00000371248 FAM155AB1AL88 458 aaPredicted RBP20.49■□□□□ 0.87
VPS37B-202ENST00000371248 CPLX1O14810 134 aa20.49■□□□□ 0.87
VPS37B-202ENST00000371248 DHX16O60231 1041 aaKnown RBP20.49■□□□□ 0.87
VPS37B-202ENST00000371248 CETPP11597 493 aa20.49■□□□□ 0.87
VPS37B-202ENST00000371248 GNAQP50148 359 aa20.49■□□□□ 0.87
VPS37B-202ENST00000371248 MOGSQ13724 837 aa20.49■□□□□ 0.87
VPS37B-202ENST00000371248 TREML2Q5T2D2 321 aa20.49■□□□□ 0.87
VPS37B-202ENST00000371248 CCL15-CCL14A0A0B4J2E2 113 aa20.49■□□□□ 0.87
VPS37B-202ENST00000371248 RASSF10A6NK89 507 aa20.49■□□□□ 0.87
VPS37B-202ENST00000371248 DTNBO60941 627 aa20.49■□□□□ 0.87
VPS37B-202ENST00000371248 SLC16A2P36021 539 aa20.49■□□□□ 0.87
VPS37B-202ENST00000371248 IKQ13123 557 aaPredicted RBP20.49■□□□□ 0.87
VPS37B-202ENST00000371248 CCL15Q16663 113 aa20.49■□□□□ 0.87
VPS37B-202ENST00000371248 TMTC3Q6ZXV5 915 aa20.49■□□□□ 0.87
VPS37B-202ENST00000371248 SRBD1Q8N5C6 995 aaKnown RBP20.49■□□□□ 0.87
VPS37B-202ENST00000371248 TANGO6Q9C0B7 1094 aa20.49■□□□□ 0.87
VPS37B-202ENST00000371248 NBPF11Q86T75 865 aa20.48■□□□□ 0.87
VPS37B-202ENST00000371248 MYH6P13533 1939 aa20.48■□□□□ 0.87
VPS37B-202ENST00000371248 PPFIA3O75145 1194 aa20.47■□□□□ 0.87
VPS37B-202ENST00000371248 HTRA3P83110 453 aa20.47■□□□□ 0.87
VPS37B-202ENST00000371248 NTRK3Q16288 839 aa20.47■□□□□ 0.87
VPS37B-202ENST00000371248 PARP14Q460N5 1801 aa20.47■□□□□ 0.87
VPS37B-202ENST00000371248 STAT2P52630 851 aa20.47■□□□□ 0.87
VPS37B-202ENST00000371248 CUL4AQ13619 759 aa20.47■□□□□ 0.87
VPS37B-202ENST00000371248 CPLX2Q6PUV4 134 aaKnown RBP20.47■□□□□ 0.87
VPS37B-202ENST00000371248 SAMD1Q6SPF0 538 aaPredicted RBP20.47■□□□□ 0.87
VPS37B-202ENST00000371248 BRI3BPQ8WY22 251 aa20.47■□□□□ 0.87
VPS37B-202ENST00000371248 LZTS2Q9BRK4 669 aa20.47■□□□□ 0.87
VPS37B-202ENST00000371248 VAT1LQ9HCJ6 419 aa20.47■□□□□ 0.87
VPS37B-202ENST00000371248 FBXO28Q9NVF7 368 aa20.47■□□□□ 0.87
VPS37B-202ENST00000371248 FEM1BQ9UK73 627 aa20.47■□□□□ 0.87
VPS37B-202ENST00000371248 AGTPBP1Q9UPW5 1226 aa20.47■□□□□ 0.87
VPS37B-202ENST00000371248 USP17L15C9J2P7 530 aa20.46■□□□□ 0.87
VPS37B-202ENST00000371248 USP17L13C9JLJ4 530 aa20.46■□□□□ 0.87
VPS37B-202ENST00000371248 USP17L11C9JVI0 530 aa20.46■□□□□ 0.87
VPS37B-202ENST00000371248 USP17L18D6R9N7 530 aa20.46■□□□□ 0.87
VPS37B-202ENST00000371248 USP17L22D6RA61 530 aa20.46■□□□□ 0.87
VPS37B-202ENST00000371248 USP17L17D6RBQ6 530 aa20.46■□□□□ 0.87
VPS37B-202ENST00000371248 USP17L19D6RCP7 530 aa20.46■□□□□ 0.87
VPS37B-202ENST00000371248 USP17L20D6RJB6 530 aa20.46■□□□□ 0.87
VPS37B-202ENST00000371248 CTDNEP1O95476 244 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms