RNA–Protein interactions for RNA: ENST00000369729.7

SFR1-202, Transcript of SWI5 dependent homologous recombination repair protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFR1, Length 1,503 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFR1-202ENST00000369729 RBM46Q8TBY0 533 aaKnown RBP10.27□□□□□ -0.77
SFR1-202ENST00000369729 ISY1Q9ULR0 285 aaKnown RBP10.27□□□□□ -0.77
SFR1-202ENST00000369729 CIZ1Q9ULV3 898 aaPredicted RBP10.27□□□□□ -0.77
SFR1-202ENST00000369729 TMX2Q9Y320 296 aa10.27□□□□□ -0.77
SFR1-202ENST00000369729 USP17L10C9JJH3 530 aa10.26□□□□□ -0.77
SFR1-202ENST00000369729 USP2O75604 605 aaPredicted RBP10.26□□□□□ -0.77
SFR1-202ENST00000369729 IFNAR1P17181 557 aa10.26□□□□□ -0.77
SFR1-202ENST00000369729 SMARCA1P28370 1054 aa10.26□□□□□ -0.77
SFR1-202ENST00000369729 SLC1A4P43007 532 aa10.26□□□□□ -0.77
SFR1-202ENST00000369729 NUCB2P80303 420 aa10.26□□□□□ -0.77
SFR1-202ENST00000369729 PRKG1Q13976 671 aa10.26□□□□□ -0.77
SFR1-202ENST00000369729 TRIM29Q14134 588 aa10.26□□□□□ -0.77
SFR1-202ENST00000369729 GRM4Q14833 912 aa10.26□□□□□ -0.77
SFR1-202ENST00000369729 MAP3K11Q16584 847 aa10.26□□□□□ -0.77
SFR1-202ENST00000369729 CCDC96Q2M329 555 aa10.26□□□□□ -0.77
SFR1-202ENST00000369729 SLFN13Q68D06 897 aa10.26□□□□□ -0.77
SFR1-202ENST00000369729 CCDC144CPQ8IYA2 1237 aa10.26□□□□□ -0.77
SFR1-202ENST00000369729 LRRC47Q8N1G4 583 aaKnown RBP10.26□□□□□ -0.77
SFR1-202ENST00000369729 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.26□□□□□ -0.77
SFR1-202ENST00000369729 LPAR1Q92633 364 aa10.26□□□□□ -0.77
SFR1-202ENST00000369729 GMCL1Q96IK5 515 aa10.26□□□□□ -0.77
SFR1-202ENST00000369729 MYL10Q9BUA6 226 aa10.26□□□□□ -0.77
SFR1-202ENST00000369729 WDR18Q9BV38 432 aa10.26□□□□□ -0.77
SFR1-202ENST00000369729 HPS5Q9UPZ3 1129 aa10.26□□□□□ -0.77
SFR1-202ENST00000369729 MTMR7Q9Y216 660 aa10.26□□□□□ -0.77
SFR1-202ENST00000369729 SIPA1L1O43166 1804 aa10.25□□□□□ -0.77
SFR1-202ENST00000369729 PTPDC1A2A3K4 754 aa10.25□□□□□ -0.77
SFR1-202ENST00000369729 C19orf81C9J6K1 198 aa10.25□□□□□ -0.77
SFR1-202ENST00000369729 F5H6K3 240 aa10.25□□□□□ -0.77
SFR1-202ENST00000369729 LARGE1O95461 756 aa10.25□□□□□ -0.77
SFR1-202ENST00000369729 GJB2P29033 226 aa10.25□□□□□ -0.77
SFR1-202ENST00000369729 INPP5BP32019 993 aa10.25□□□□□ -0.77
SFR1-202ENST00000369729 ADD1P35611 737 aaKnown RBP10.25□□□□□ -0.77
SFR1-202ENST00000369729 KLRC3Q07444 240 aa10.25□□□□□ -0.77
SFR1-202ENST00000369729 TRAF1Q13077 416 aa10.25□□□□□ -0.77
SFR1-202ENST00000369729 ERO1BQ86YB8 467 aa10.25□□□□□ -0.77
SFR1-202ENST00000369729 ZNF280CQ8ND82 737 aa10.25□□□□□ -0.77
SFR1-202ENST00000369729 SMC1BQ8NDV3 1235 aa10.25□□□□□ -0.77
SFR1-202ENST00000369729 NKX2-3Q8TAU0 364 aa10.25□□□□□ -0.77
SFR1-202ENST00000369729 ZNF408Q9H9D4 720 aa10.25□□□□□ -0.77
SFR1-202ENST00000369729 SENP2Q9HC62 589 aa10.25□□□□□ -0.77
SFR1-202ENST00000369729 NCOA5Q9HCD5 579 aaKnown RBP10.25□□□□□ -0.77
SFR1-202ENST00000369729 TMOD4Q9NZQ9 345 aa10.25□□□□□ -0.77
SFR1-202ENST00000369729 SEC63Q9UGP8 760 aaKnown RBP10.25□□□□□ -0.77
SFR1-202ENST00000369729 STK36Q9NRP7 1315 aa10.25□□□□□ -0.77
SFR1-202ENST00000369729 KLRF2D3W0D1 207 aa10.24□□□□□ -0.77
SFR1-202ENST00000369729 H3BQV1 296 aa10.24□□□□□ -0.77
SFR1-202ENST00000369729 DEXIO95424 95 aa10.24□□□□□ -0.77
SFR1-202ENST00000369729 SLURP2P0DP57 97 aa10.24□□□□□ -0.77
SFR1-202ENST00000369729 SNHG28P0DPA3 235 aa10.24□□□□□ -0.77
SFR1-202ENST00000369729 PDHBP11177 359 aa10.24□□□□□ -0.77
SFR1-202ENST00000369729 BMP3P12645 472 aa10.24□□□□□ -0.77
SFR1-202ENST00000369729 PTPRAP18433 802 aa10.24□□□□□ -0.77
SFR1-202ENST00000369729 RXRAP19793 462 aa10.24□□□□□ -0.77
SFR1-202ENST00000369729 GUCY1A2P33402 732 aa10.24□□□□□ -0.77
SFR1-202ENST00000369729 PPATQ06203 517 aa10.24□□□□□ -0.77
SFR1-202ENST00000369729 IKQ13123 557 aaPredicted RBP10.24□□□□□ -0.77
SFR1-202ENST00000369729 RRP1BQ14684 758 aaKnown RBP10.24□□□□□ -0.77
SFR1-202ENST00000369729 IFFO2Q5TF58 517 aa10.24□□□□□ -0.77
SFR1-202ENST00000369729 LARP1BQ659C4 914 aaKnown RBP10.24□□□□□ -0.77
SFR1-202ENST00000369729 USP17L2Q6R6M4 530 aa10.24□□□□□ -0.77
SFR1-202ENST00000369729 TMTC3Q6ZXV5 915 aa10.24□□□□□ -0.77
SFR1-202ENST00000369729 RAB11FIP4Q86YS3 637 aa10.24□□□□□ -0.77
SFR1-202ENST00000369729 RGS22Q8NE09 1264 aa10.24□□□□□ -0.77
SFR1-202ENST00000369729 NSUN7Q8NE18 718 aaKnown RBP10.24□□□□□ -0.77
SFR1-202ENST00000369729 SMARCC2Q8TAQ2 1214 aa10.24□□□□□ -0.77
SFR1-202ENST00000369729 CHURC1Q8WUH1 139 aa10.24□□□□□ -0.77
SFR1-202ENST00000369729 ZKSCAN4Q969J2 545 aaPredicted RBP10.24□□□□□ -0.77
SFR1-202ENST00000369729 SLC10A4Q96EP9 437 aa10.24□□□□□ -0.77
SFR1-202ENST00000369729 RNF26Q9BY78 433 aaPredicted RBP10.24□□□□□ -0.77
SFR1-202ENST00000369729 KIAA1683Q9H0B3 1180 aa10.24□□□□□ -0.77
SFR1-202ENST00000369729 VCPKMTQ9H867 229 aa10.24□□□□□ -0.77
SFR1-202ENST00000369729 GBA2Q9HCG7 927 aaPredicted RBP10.24□□□□□ -0.77
SFR1-202ENST00000369729 CHMP5Q9NZZ3 219 aa10.24□□□□□ -0.77
SFR1-202ENST00000369729 ORC3Q9UBD5 711 aaPredicted RBP10.24□□□□□ -0.77
SFR1-202ENST00000369729 ZHX2Q9Y6X8 837 aa10.24□□□□□ -0.77
SFR1-202ENST00000369729 PALM3A6NDB9 673 aaPredicted RBP10.23□□□□□ -0.77
SFR1-202ENST00000369729 CELF2O95319 508 aaKnown RBP10.23□□□□□ -0.77
SFR1-202ENST00000369729 FMNL1O95466 1100 aaPredicted RBP10.23□□□□□ -0.77
SFR1-202ENST00000369729 BACE1P56817 501 aa10.23□□□□□ -0.77
SFR1-202ENST00000369729 ZNF543Q08ER8 600 aa10.23□□□□□ -0.77
SFR1-202ENST00000369729 VGLL4Q14135 290 aa10.23□□□□□ -0.77
SFR1-202ENST00000369729 FAM160B2Q86V87 743 aa10.23□□□□□ -0.77
SFR1-202ENST00000369729 FAM177A1Q8N128 213 aaPredicted RBP10.23□□□□□ -0.77
SFR1-202ENST00000369729 CCDC12Q8WUD4 166 aaPredicted RBP10.23□□□□□ -0.77
SFR1-202ENST00000369729 RRP36Q96EU6 259 aaKnown RBP10.23□□□□□ -0.77
SFR1-202ENST00000369729 SPZ1Q9BXG8 430 aa10.23□□□□□ -0.77
SFR1-202ENST00000369729 SLC26A6Q9BXS9 759 aa10.23□□□□□ -0.77
SFR1-202ENST00000369729 MAD2L2Q9UI95 211 aa10.23□□□□□ -0.77
SFR1-202ENST00000369729 PNMA2Q9UL42 364 aa10.23□□□□□ -0.77
SFR1-202ENST00000369729 UTRNP46939 3433 aa10.23□□□□□ -0.77
SFR1-202ENST00000369729 SSC5DA1L4H1 1573 aa10.23□□□□□ -0.77
SFR1-202ENST00000369729 WDR33Q9C0J8 1336 aaKnown RBP10.23□□□□□ -0.77
SFR1-202ENST00000369729 hCG_1984214I3L0E3 225 aa10.23□□□□□ -0.77
SFR1-202ENST00000369729 CXCL11O14625 94 aa10.23□□□□□ -0.77
SFR1-202ENST00000369729 WDR46O15213 610 aaKnown RBP10.23□□□□□ -0.77
SFR1-202ENST00000369729 PRPF3O43395 683 aaKnown RBP10.23□□□□□ -0.77
SFR1-202ENST00000369729 NDUFB10O96000 172 aa10.23□□□□□ -0.77
SFR1-202ENST00000369729 YY1P25490 414 aa10.23□□□□□ -0.77
SFR1-202ENST00000369729 CDC27P30260 824 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms