RNA–Protein interactions for RNA: ENST00000369509.1

VANGL1-203, Transcript of VANGL planar cell polarity protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VANGL1, Length 2,062 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-203ENST00000369509 LZTS2Q9BRK4 669 aa12.81□□□□□ -0.36
VANGL1-203ENST00000369509 PHF20Q9BVI0 1012 aa12.81□□□□□ -0.36
VANGL1-203ENST00000369509 FTOQ9C0B1 505 aaKnown RBP eCLIP12.81□□□□□ -0.36
VANGL1-203ENST00000369509 VPS54Q9P1Q0 977 aa12.81□□□□□ -0.36
VANGL1-203ENST00000369509 TFIP11Q9UBB9 837 aaKnown RBP12.81□□□□□ -0.36
VANGL1-203ENST00000369509 HACL1Q9UJ83 578 aa12.81□□□□□ -0.36
VANGL1-203ENST00000369509 MTMR7Q9Y216 660 aa12.81□□□□□ -0.36
VANGL1-203ENST00000369509 KLRF2D3W0D1 207 aa12.8□□□□□ -0.36
VANGL1-203ENST00000369509 SCG2P13521 617 aa12.8□□□□□ -0.36
VANGL1-203ENST00000369509 EEF2P13639 858 aaKnown RBP12.8□□□□□ -0.36
VANGL1-203ENST00000369509 SMARCA1P28370 1054 aa12.8□□□□□ -0.36
VANGL1-203ENST00000369509 TNNI2P48788 182 aa12.8□□□□□ -0.36
VANGL1-203ENST00000369509 TNFAIP1Q13829 316 aa12.8□□□□□ -0.36
VANGL1-203ENST00000369509 TRPM4Q8TD43 1214 aa12.8□□□□□ -0.36
VANGL1-203ENST00000369509 RNF181Q9P0P0 153 aa12.8□□□□□ -0.36
VANGL1-203ENST00000369509 SCAF8Q9UPN6 1271 aaKnown RBP12.8□□□□□ -0.36
VANGL1-203ENST00000369509 GH2P01242 217 aa12.79□□□□□ -0.36
VANGL1-203ENST00000369509 UBE2HP62256 183 aa12.79□□□□□ -0.36
VANGL1-203ENST00000369509 ICA1Q05084 483 aa12.79□□□□□ -0.36
VANGL1-203ENST00000369509 ASPRV1Q53RT3 343 aa12.79□□□□□ -0.36
VANGL1-203ENST00000369509 DIS3L2Q8IYB7 885 aaKnown RBP12.79□□□□□ -0.36
VANGL1-203ENST00000369509 CPVLQ9H3G5 476 aa12.79□□□□□ -0.36
VANGL1-203ENST00000369509 TSPY26PQ9H489 355 aa12.79□□□□□ -0.36
VANGL1-203ENST00000369509 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.79□□□□□ -0.36
VANGL1-203ENST00000369509 CFAP45Q9UL16 551 aa12.79□□□□□ -0.36
VANGL1-203ENST00000369509 PAPPA2Q9BXP8 1791 aa12.79□□□□□ -0.36
VANGL1-203ENST00000369509 BTBD18B2RXH4 712 aa12.79□□□□□ -0.36
VANGL1-203ENST00000369509 H7C1D1 291 aa12.79□□□□□ -0.36
VANGL1-203ENST00000369509 LETM1O95202 739 aaPredicted RBP12.79□□□□□ -0.36
VANGL1-203ENST00000369509 MSNP26038 577 aaKnown RBP12.79□□□□□ -0.36
VANGL1-203ENST00000369509 ZNF543Q08ER8 600 aa12.79□□□□□ -0.36
VANGL1-203ENST00000369509 ZSCAN30Q86W11 494 aa12.79□□□□□ -0.36
VANGL1-203ENST00000369509 SPATA32Q96LK8 384 aa12.79□□□□□ -0.36
VANGL1-203ENST00000369509 ZNF396Q96N95 335 aaPredicted RBP12.79□□□□□ -0.36
VANGL1-203ENST00000369509 FOXP1Q9H334 677 aaPredicted RBP12.79□□□□□ -0.36
VANGL1-203ENST00000369509 RIOX1Q9H6W3 641 aa12.79□□□□□ -0.36
VANGL1-203ENST00000369509 NOSTRINQ8IVI9 506 aa12.78□□□□□ -0.36
VANGL1-203ENST00000369509 OXER1Q8TDS5 423 aa12.78□□□□□ -0.36
VANGL1-203ENST00000369509 POLR3EQ9NVU0 708 aa12.78□□□□□ -0.36
VANGL1-203ENST00000369509 RTEL1Q9NZ71 1219 aa12.78□□□□□ -0.36
VANGL1-203ENST00000369509 RCOR1Q9UKL0 485 aa12.78□□□□□ -0.36
VANGL1-203ENST00000369509 ZBTB21Q9ULJ3 1066 aa12.78□□□□□ -0.36
VANGL1-203ENST00000369509 PHIPQ8WWQ0 1821 aa12.78□□□□□ -0.36
VANGL1-203ENST00000369509 FRMPD2Q68DX3 1309 aaPredicted RBP12.78□□□□□ -0.36
VANGL1-203ENST00000369509 XBP1P17861 261 aa12.77□□□□□ -0.36
VANGL1-203ENST00000369509 EPS15P42566 896 aa12.77□□□□□ -0.36
VANGL1-203ENST00000369509 HIRAP54198 1017 aaPredicted RBP12.77□□□□□ -0.36
VANGL1-203ENST00000369509 ATP2B2Q01814 1243 aa12.77□□□□□ -0.36
VANGL1-203ENST00000369509 NR5A1Q13285 461 aa12.77□□□□□ -0.36
VANGL1-203ENST00000369509 TYW1BQ6NUM6 668 aa12.77□□□□□ -0.36
VANGL1-203ENST00000369509 MIGA2Q7L4E1 593 aa12.77□□□□□ -0.36
VANGL1-203ENST00000369509 TNFRSF25Q93038 417 aa12.77□□□□□ -0.36
VANGL1-203ENST00000369509 NAP1L5Q96NT1 182 aaPredicted RBP12.77□□□□□ -0.36
VANGL1-203ENST00000369509 SYNPO2Q9UMS6 1093 aa12.77□□□□□ -0.36
VANGL1-203ENST00000369509 A0A1W2PRG0 241 aa12.77□□□□□ -0.37
VANGL1-203ENST00000369509 PHF20L1A8MW92 1017 aa12.77□□□□□ -0.37
VANGL1-203ENST00000369509 DDNO94850 711 aaPredicted RBP12.77□□□□□ -0.37
VANGL1-203ENST00000369509 SAFBQ15424 915 aaKnown RBP eCLIP12.77□□□□□ -0.37
VANGL1-203ENST00000369509 GPATCH4Q5T3I0 446 aaKnown RBP12.77□□□□□ -0.37
VANGL1-203ENST00000369509 C9orf131Q5VYM1 1079 aa12.77□□□□□ -0.37
VANGL1-203ENST00000369509 WWC2Q6AWC2 1192 aa12.77□□□□□ -0.37
VANGL1-203ENST00000369509 GMCL1P1Q8NEA9 526 aa12.77□□□□□ -0.37
VANGL1-203ENST00000369509 PIBF1Q8WXW3 757 aa12.77□□□□□ -0.37
VANGL1-203ENST00000369509 PGBD1Q96JS3 809 aa12.77□□□□□ -0.37
VANGL1-203ENST00000369509 DEFB129Q9H1M3 183 aa12.77□□□□□ -0.37
VANGL1-203ENST00000369509 CABP5Q9NP86 173 aa12.77□□□□□ -0.37
VANGL1-203ENST00000369509 SH3GLB2Q9NR46 395 aa12.77□□□□□ -0.37
VANGL1-203ENST00000369509 SSC5DA1L4H1 1573 aa12.76□□□□□ -0.37
VANGL1-203ENST00000369509 SCN4AP35499 1836 aa12.76□□□□□ -0.37
VANGL1-203ENST00000369509 CAP2P40123 477 aa12.76□□□□□ -0.37
VANGL1-203ENST00000369509 CEBPZQ03701 1054 aaKnown RBP12.76□□□□□ -0.37
VANGL1-203ENST00000369509 CCDC183Q5T5S1 534 aa12.76□□□□□ -0.37
VANGL1-203ENST00000369509 ANGEL2Q5VTE6 544 aaKnown RBP12.76□□□□□ -0.37
VANGL1-203ENST00000369509 APOBEC3FQ8IUX4 373 aaKnown RBP12.76□□□□□ -0.37
VANGL1-203ENST00000369509 DCAF4Q8WV16 495 aa12.76□□□□□ -0.37
VANGL1-203ENST00000369509 GPKOWQ92917 476 aaPredicted RBP eCLIP12.76□□□□□ -0.37
VANGL1-203ENST00000369509 CLIC4Q9Y696 253 aa12.76□□□□□ -0.37
VANGL1-203ENST00000369509 OTOFQ9HC10 1997 aa12.76□□□□□ -0.37
VANGL1-203ENST00000369509 STXBP3O00186 592 aa12.76□□□□□ -0.37
VANGL1-203ENST00000369509 YEATS4O95619 227 aa12.76□□□□□ -0.37
VANGL1-203ENST00000369509 KRT2P35908 639 aa12.76□□□□□ -0.37
VANGL1-203ENST00000369509 GNL2Q13823 731 aaKnown RBP12.76□□□□□ -0.37
VANGL1-203ENST00000369509 FAM177A1Q8N128 213 aaPredicted RBP12.76□□□□□ -0.37
VANGL1-203ENST00000369509 LINC00301Q8NCQ3 95 aa12.76□□□□□ -0.37
VANGL1-203ENST00000369509 PDLIM2Q96JY6 352 aa12.76□□□□□ -0.37
VANGL1-203ENST00000369509 UBA5Q9GZZ9 404 aa12.76□□□□□ -0.37
VANGL1-203ENST00000369509 BARHL2Q9NY43 387 aa12.76□□□□□ -0.37
VANGL1-203ENST00000369509 GGA3Q9NZ52 723 aa12.76□□□□□ -0.37
VANGL1-203ENST00000369509 ADAMTS3O15072 1205 aa12.75□□□□□ -0.37
VANGL1-203ENST00000369509 TOB1P50616 345 aaPredicted RBP12.75□□□□□ -0.37
VANGL1-203ENST00000369509 EARS2Q5JPH6 523 aaKnown RBP12.75□□□□□ -0.37
VANGL1-203ENST00000369509 SLFN13Q68D06 897 aa12.75□□□□□ -0.37
VANGL1-203ENST00000369509 TTBK2Q6IQ55 1244 aa12.75□□□□□ -0.37
VANGL1-203ENST00000369509 KCTD1Q719H9 257 aa12.75□□□□□ -0.37
VANGL1-203ENST00000369509 MTMR8Q96EF0 704 aa12.75□□□□□ -0.37
VANGL1-203ENST00000369509 GMCL1Q96IK5 515 aa12.75□□□□□ -0.37
VANGL1-203ENST00000369509 PIGSQ96S52 555 aa12.75□□□□□ -0.37
VANGL1-203ENST00000369509 GPCPD1Q9NPB8 672 aa12.75□□□□□ -0.37
VANGL1-203ENST00000369509 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.75□□□□□ -0.37
VANGL1-203ENST00000369509 PARP14Q460N5 1801 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms