RNA–Protein interactions for RNA: ENST00000369407.3

PHGDH-201, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 3,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-201ENST00000369407 UBE3CQ15386 1083 aa13.82□□□□□ -0.2
PHGDH-201ENST00000369407 ANKLE2Q86XL3 938 aa13.82□□□□□ -0.2
PHGDH-201ENST00000369407 TICAM2Q86XR7 235 aa13.82□□□□□ -0.2
PHGDH-201ENST00000369407 GSDMAQ96QA5 445 aa13.82□□□□□ -0.2
PHGDH-201ENST00000369407 IQSEC3Q9UPP2 1182 aaPredicted RBP13.82□□□□□ -0.2
PHGDH-201ENST00000369407 GOLGA6CA6NDK9 693 aa13.82□□□□□ -0.2
PHGDH-201ENST00000369407 GSG1L2A8MUP6 293 aa13.82□□□□□ -0.2
PHGDH-201ENST00000369407 GOLGA6DP0CG33 693 aa13.82□□□□□ -0.2
PHGDH-201ENST00000369407 GUCY2CP25092 1073 aa13.82□□□□□ -0.2
PHGDH-201ENST00000369407 PMS1P54277 932 aaKnown RBP13.82□□□□□ -0.2
PHGDH-201ENST00000369407 PAK1Q13153 545 aa13.82□□□□□ -0.2
PHGDH-201ENST00000369407 GOLGA6AQ9NYA3 693 aa13.82□□□□□ -0.2
PHGDH-201ENST00000369407 SLC4A4Q9Y6R1 1079 aa13.82□□□□□ -0.2
PHGDH-201ENST00000369407 BAZ2BQ9UIF8 2168 aaKnown RBP13.82□□□□□ -0.2
PHGDH-201ENST00000369407 MST1RQ04912 1400 aa13.82□□□□□ -0.2
PHGDH-201ENST00000369407 MCM7P33993 719 aa13.81□□□□□ -0.2
PHGDH-201ENST00000369407 SND1Q7KZF4 910 aaKnown RBP eCLIP13.81□□□□□ -0.21e-7■■■□□ 18.8
PHGDH-201ENST00000369407 FAM76AQ8TAV0 307 aa13.81□□□□□ -0.2
PHGDH-201ENST00000369407 AGPAT5Q9NUQ2 364 aa13.81□□□□□ -0.2
PHGDH-201ENST00000369407 EHD2Q9NZN4 543 aa13.81□□□□□ -0.2
PHGDH-201ENST00000369407 LIMA1Q9UHB6 759 aaKnown RBP13.81□□□□□ -0.2
PHGDH-201ENST00000369407 RIC1Q4ADV7 1423 aa13.81□□□□□ -0.2
PHGDH-201ENST00000369407 PRCPP42785 496 aa13.81□□□□□ -0.2
PHGDH-201ENST00000369407 AARSP49588 968 aaKnown RBP eCLIP13.81□□□□□ -0.2
PHGDH-201ENST00000369407 IRAK1P51617 712 aa13.81□□□□□ -0.2
PHGDH-201ENST00000369407 ISCA1Q9BUE6 129 aa13.81□□□□□ -0.2
PHGDH-201ENST00000369407 ECM29Q5VYK3 1845 aa13.81□□□□□ -0.2
PHGDH-201ENST00000369407 ITIH6Q6UXX5 1313 aa13.81□□□□□ -0.2
PHGDH-201ENST00000369407 GOLGA6BA6NDN3 693 aa13.81□□□□□ -0.2
PHGDH-201ENST00000369407 WDR59Q6PJI9 974 aa13.81□□□□□ -0.2
PHGDH-201ENST00000369407 MSL3Q8N5Y2 521 aaKnown RBP13.81□□□□□ -0.2
PHGDH-201ENST00000369407 CTCFLQ8NI51 663 aaPredicted RBP13.81□□□□□ -0.2
PHGDH-201ENST00000369407 BCAS4Q8TDM0 211 aa13.81□□□□□ -0.2
PHGDH-201ENST00000369407 SDR42E1Q8WUS8 393 aa13.81□□□□□ -0.2
PHGDH-201ENST00000369407 UBAC1Q9BSL1 405 aa13.81□□□□□ -0.2
PHGDH-201ENST00000369407 LUC7L2Q9Y383 392 aaKnown RBP13.81□□□□□ -0.2
PHGDH-201ENST00000369407 CYP2D7A0A087X1C5 515 aa13.8□□□□□ -0.2
PHGDH-201ENST00000369407 FECHP22830 423 aa13.8□□□□□ -0.2
PHGDH-201ENST00000369407 CXCR5P32302 372 aa13.8□□□□□ -0.2
PHGDH-201ENST00000369407 KRT2P35908 639 aa13.8□□□□□ -0.2
PHGDH-201ENST00000369407 HLFQ16534 295 aa13.8□□□□□ -0.2
PHGDH-201ENST00000369407 EFCAB13Q8IY85 973 aa13.8□□□□□ -0.2
PHGDH-201ENST00000369407 OR8K1Q8NGG5 319 aa13.8□□□□□ -0.2
PHGDH-201ENST00000369407 MYO1AQ9UBC5 1043 aa13.8□□□□□ -0.2
PHGDH-201ENST00000369407 FAM169AQ9Y6X4 670 aa13.8□□□□□ -0.2
PHGDH-201ENST00000369407 MAP3K15Q6ZN16 1313 aa13.8□□□□□ -0.2
PHGDH-201ENST00000369407 MYO5AQ9Y4I1 1855 aaKnown RBP13.8□□□□□ -0.2
PHGDH-201ENST00000369407 ERLIN2O94905 339 aa13.8□□□□□ -0.2
PHGDH-201ENST00000369407 PARP1P09874 1014 aaKnown RBP13.8□□□□□ -0.2
PHGDH-201ENST00000369407 IDEP14735 1019 aa13.8□□□□□ -0.2
PHGDH-201ENST00000369407 VEGFAP15692 232 aaPredicted RBP13.8□□□□□ -0.2
PHGDH-201ENST00000369407 GNGT1P63211 74 aa13.8□□□□□ -0.2
PHGDH-201ENST00000369407 PKN1Q16512 942 aa13.8□□□□□ -0.2
PHGDH-201ENST00000369407 MAP9Q49MG5 647 aa13.8□□□□□ -0.2
PHGDH-201ENST00000369407 CCNI2Q6ZMN8 369 aaPredicted RBP13.8□□□□□ -0.2
PHGDH-201ENST00000369407 KRT26Q7Z3Y9 468 aa13.8□□□□□ -0.2
PHGDH-201ENST00000369407 IRF2BP1Q8IU81 584 aa13.8□□□□□ -0.2
PHGDH-201ENST00000369407 ANKRD20A12PQ8NF67 263 aa13.8□□□□□ -0.2
PHGDH-201ENST00000369407 PCMTD1Q96MG8 357 aaPredicted RBP13.8□□□□□ -0.2
PHGDH-201ENST00000369407 PSMD14O00487 310 aa13.79□□□□□ -0.2
PHGDH-201ENST00000369407 IL17AQ16552 155 aa13.79□□□□□ -0.2
PHGDH-201ENST00000369407 KRT23Q9C075 422 aa13.79□□□□□ -0.2
PHGDH-201ENST00000369407 DMGDHQ9UI17 866 aaKnown RBP13.79□□□□□ -0.2
PHGDH-201ENST00000369407 SCN11AQ9UI33 1791 aa13.79□□□□□ -0.2
PHGDH-201ENST00000369407 SLIT3O75094 1523 aa13.79□□□□□ -0.2
PHGDH-201ENST00000369407 B4DLN1 442 aa13.79□□□□□ -0.2
PHGDH-201ENST00000369407 TUBB4BP68371 445 aa13.79□□□□□ -0.2
PHGDH-201ENST00000369407 KCTD19Q17RG1 926 aaPredicted RBP13.79□□□□□ -0.2
PHGDH-201ENST00000369407 TTC38Q5R3I4 469 aa13.79□□□□□ -0.2
PHGDH-201ENST00000369407 KCTD16Q68DU8 428 aa13.79□□□□□ -0.2
PHGDH-201ENST00000369407 PIK3AP1Q6ZUJ8 805 aa13.79□□□□□ -0.2
PHGDH-201ENST00000369407 VIPAS39Q9H9C1 493 aa13.79□□□□□ -0.2
PHGDH-201ENST00000369407 NKRFO15226 690 aaKnown RBP eCLIP13.79□□□□□ -0.2
PHGDH-201ENST00000369407 ATP1A2P50993 1020 aa13.79□□□□□ -0.2
PHGDH-201ENST00000369407 MNAT1P51948 309 aa13.79□□□□□ -0.2
PHGDH-201ENST00000369407 RASGRF1Q13972 1273 aa13.79□□□□□ -0.2
PHGDH-201ENST00000369407 TSR1Q2NL82 804 aaKnown RBP13.79□□□□□ -0.2
PHGDH-201ENST00000369407 MB21D1Q8N884 522 aa13.79□□□□□ -0.2
PHGDH-201ENST00000369407 LRRC1Q9BTT6 524 aa13.79□□□□□ -0.2
PHGDH-201ENST00000369407 HAUS4Q9H6D7 363 aa13.79□□□□□ -0.2
PHGDH-201ENST00000369407 RWDD2AQ9UIY3 292 aa13.79□□□□□ -0.2
PHGDH-201ENST00000369407 CEP83Q9Y592 693 aa13.79□□□□□ -0.2
PHGDH-201ENST00000369407 TNKSO95271 1327 aa13.78□□□□□ -0.2
PHGDH-201ENST00000369407 A0A087WUV0 522 aaPredicted RBP13.78□□□□□ -0.2
PHGDH-201ENST00000369407 PP2D1A8MPX8 630 aa13.78□□□□□ -0.2
PHGDH-201ENST00000369407 SEMA3EO15041 775 aa13.78□□□□□ -0.2
PHGDH-201ENST00000369407 PDE8BO95263 885 aa13.78□□□□□ -0.2
PHGDH-201ENST00000369407 CCDC172P0C7W6 258 aa13.78□□□□□ -0.2
PHGDH-201ENST00000369407 ERCC3P19447 782 aa13.78□□□□□ -0.2
PHGDH-201ENST00000369407 SH2D3CQ8N5H7 860 aa13.78□□□□□ -0.2
PHGDH-201ENST00000369407 SPATA5Q8NB90 893 aa13.78□□□□□ -0.2
PHGDH-201ENST00000369407 ANKRD18BA2A2Z9 1011 aa13.78□□□□□ -0.2
PHGDH-201ENST00000369407 LRRC10BA6NIK2 292 aa13.78□□□□□ -0.2
PHGDH-201ENST00000369407 EBAG9O00559 213 aa13.78□□□□□ -0.2
PHGDH-201ENST00000369407 CSF1RP07333 972 aa13.78□□□□□ -0.2
PHGDH-201ENST00000369407 PLEKP08567 350 aaPredicted RBP13.78□□□□□ -0.2
PHGDH-201ENST00000369407 MMP14P50281 582 aa13.78□□□□□ -0.2
PHGDH-201ENST00000369407 DNA2P51530 1060 aa13.78□□□□□ -0.2
PHGDH-201ENST00000369407 EIF5P55010 431 aaKnown RBP13.78□□□□□ -0.2
PHGDH-201ENST00000369407 RASSF8Q8NHQ8 419 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms