RNA–Protein interactions for RNA: ENST00000369047.8

ECM1-202, Transcript of extracellular matrix protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECM1, Length 2,070 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-202ENST00000369047 SPATA20Q8TB22 786 aa15.02□□□□□ -0.01
ECM1-202ENST00000369047 FAM163AQ96GL9 167 aaPredicted RBP15.02□□□□□ -0.01
ECM1-202ENST00000369047 ACTN4O43707 911 aaKnown RBP15.01□□□□□ -0.01
ECM1-202ENST00000369047 KCNJ6P48051 423 aa15.01□□□□□ -0.01
ECM1-202ENST00000369047 GRIN1Q05586 938 aa15.01□□□□□ -0.01
ECM1-202ENST00000369047 TTC38Q5R3I4 469 aa15.01□□□□□ -0.01
ECM1-202ENST00000369047 ISM2Q6H9L7 571 aa15.01□□□□□ -0.01
ECM1-202ENST00000369047 DPP8Q6V1X1 898 aaPredicted RBP15.01□□□□□ -0.01
ECM1-202ENST00000369047 TBC1D22AQ8WUA7 517 aa15.01□□□□□ -0.01
ECM1-202ENST00000369047 LZTS2Q9BRK4 669 aa15.01□□□□□ -0.01
ECM1-202ENST00000369047 IL17RBQ9NRM6 502 aa15.01□□□□□ -0.01
ECM1-202ENST00000369047 JAG2Q9Y219 1238 aa15.01□□□□□ -0.01
ECM1-202ENST00000369047 PAXBP1Q9Y5B6 917 aa15.01□□□□□ -0.01
ECM1-202ENST00000369047 GPR75-ASB3A0A0A6YYF3 556 aa15.01□□□□□ -0.01
ECM1-202ENST00000369047 UFL1O94874 794 aa15.01□□□□□ -0.01
ECM1-202ENST00000369047 SLFN14P0C7P3 912 aa15.01□□□□□ -0.01
ECM1-202ENST00000369047 LMOD1P29536 600 aaPredicted RBP15.01□□□□□ -0.01
ECM1-202ENST00000369047 CCZ1BP86790 482 aa15.01□□□□□ -0.01
ECM1-202ENST00000369047 CCZ1P86791 482 aaPredicted RBP15.01□□□□□ -0.01
ECM1-202ENST00000369047 EVX2Q03828 476 aa15.01□□□□□ -0.01
ECM1-202ENST00000369047 MORC3Q14149 939 aa15.01□□□□□ -0.01
ECM1-202ENST00000369047 HSP90AA2PQ14568 343 aaPredicted RBP15.01□□□□□ -0.01
ECM1-202ENST00000369047 GRM4Q14833 912 aa15.01□□□□□ -0.01
ECM1-202ENST00000369047 TPD52L1Q16890 204 aaPredicted RBP15.01□□□□□ -0.01
ECM1-202ENST00000369047 GALNT17Q6IS24 598 aa15.01□□□□□ -0.01
ECM1-202ENST00000369047 PNMA1Q8ND90 353 aa15.01□□□□□ -0.01
ECM1-202ENST00000369047 EYA3Q99504 573 aa15.01□□□□□ -0.01
ECM1-202ENST00000369047 HSD3B7Q9H2F3 369 aa15.01□□□□□ -0.01
ECM1-202ENST00000369047 MAN1B1Q9UKM7 699 aa15.01□□□□□ -0.01
ECM1-202ENST00000369047 hCG_1642624A0A1W2PR95 340 aa15□□□□□ -0.01
ECM1-202ENST00000369047 TSPY3P0CV98 308 aa15□□□□□ -0.01
ECM1-202ENST00000369047 TSPY8P0CW00 308 aa15□□□□□ -0.01
ECM1-202ENST00000369047 UBASH3AP57075 661 aa15□□□□□ -0.01
ECM1-202ENST00000369047 ATP2C1P98194 919 aaPredicted RBP15□□□□□ -0.01
ECM1-202ENST00000369047 ENOX1Q8TC92 643 aaKnown RBP15□□□□□ -0.01
ECM1-202ENST00000369047 TGFBRAP1Q8WUH2 860 aa15□□□□□ -0.01
ECM1-202ENST00000369047 RTFDC1Q9BY42 306 aaPredicted RBP15□□□□□ -0.01
ECM1-202ENST00000369047 SERPINC1P01008 464 aa14.99□□□□□ -0.01
ECM1-202ENST00000369047 ERCC5P28715 1186 aaPredicted RBP14.99□□□□□ -0.01
ECM1-202ENST00000369047 DIXDC1Q155Q3 683 aa14.99□□□□□ -0.01
ECM1-202ENST00000369047 EARS2Q5JPH6 523 aaKnown RBP14.99□□□□□ -0.01
ECM1-202ENST00000369047 TMC6Q7Z403 805 aa14.99□□□□□ -0.01
ECM1-202ENST00000369047 PDCL3Q9H2J4 239 aa14.99□□□□□ -0.01
ECM1-202ENST00000369047 NAV1Q8NEY1 1877 aa14.99□□□□□ -0.01
ECM1-202ENST00000369047 TNNT1P13805 278 aa14.99□□□□□ -0.01
ECM1-202ENST00000369047 LMNB1P20700 586 aa14.99□□□□□ -0.01
ECM1-202ENST00000369047 BMP6P22004 513 aa14.99□□□□□ -0.01
ECM1-202ENST00000369047 SFPQP23246 707 aaKnown RBP eCLIP14.99□□□□□ -0.01
ECM1-202ENST00000369047 ARL6IP4Q66PJ3 421 aaKnown RBP14.99□□□□□ -0.01
ECM1-202ENST00000369047 SH3RF1Q7Z6J0 888 aa14.99□□□□□ -0.01
ECM1-202ENST00000369047 SNED1Q8TER0 1413 aa14.98□□□□□ -0.01
ECM1-202ENST00000369047 FAM205CA6NFA0 338 aa14.98□□□□□ -0.01
ECM1-202ENST00000369047 KIF2AO00139 706 aaPredicted RBP14.98□□□□□ -0.01
ECM1-202ENST00000369047 FOXN1O15353 648 aa14.98□□□□□ -0.01
ECM1-202ENST00000369047 PTGDRQ13258 359 aa14.98□□□□□ -0.01
ECM1-202ENST00000369047 ARID5BQ14865 1188 aa14.98□□□□□ -0.01
ECM1-202ENST00000369047 ZNF174Q15697 407 aa14.98□□□□□ -0.01
ECM1-202ENST00000369047 BLIDQ8IZY5 108 aa14.98□□□□□ -0.01
ECM1-202ENST00000369047 DYNLL2Q96FJ2 89 aa14.98□□□□□ -0.01
ECM1-202ENST00000369047 GSDMAQ96QA5 445 aa14.98□□□□□ -0.01
ECM1-202ENST00000369047 ZC3H4Q9UPT8 1303 aaKnown RBP14.98□□□□□ -0.01
ECM1-202ENST00000369047 NFKBIEO00221 500 aa14.97□□□□□ -0.01
ECM1-202ENST00000369047 TUBB4AP04350 444 aa14.97□□□□□ -0.01
ECM1-202ENST00000369047 BTDP43251 543 aa14.97□□□□□ -0.01
ECM1-202ENST00000369047 C16orf86Q6ZW13 317 aa14.97□□□□□ -0.01
ECM1-202ENST00000369047 PDILTQ8N807 584 aa14.97□□□□□ -0.01
ECM1-202ENST00000369047 CCDC148Q8NFR7 591 aa14.97□□□□□ -0.01
ECM1-202ENST00000369047 TBC1D16Q8TBP0 767 aa14.97□□□□□ -0.01
ECM1-202ENST00000369047 FANCLQ9NW38 375 aa14.97□□□□□ -0.01
ECM1-202ENST00000369047 MAD2L2Q9UI95 211 aa14.97□□□□□ -0.01
ECM1-202ENST00000369047 PCDHA4Q9UN74 947 aa14.97□□□□□ -0.01
ECM1-202ENST00000369047 SUGT1Q9Y2Z0 365 aa14.97□□□□□ -0.01
ECM1-202ENST00000369047 FAM205AQ6ZU69 1335 aa14.97□□□□□ -0.01
ECM1-202ENST00000369047 ATP1A3P13637 1013 aa14.97□□□□□ -0.01
ECM1-202ENST00000369047 RASA1P20936 1047 aa14.97□□□□□ -0.01
ECM1-202ENST00000369047 SMARCA1P28370 1054 aa14.97□□□□□ -0.01
ECM1-202ENST00000369047 GRIK5Q16478 980 aa14.97□□□□□ -0.01
ECM1-202ENST00000369047 PIK3AP1Q6ZUJ8 805 aa14.97□□□□□ -0.01
ECM1-202ENST00000369047 USP49Q70CQ1 688 aa14.97□□□□□ -0.01
ECM1-202ENST00000369047 DAGLBQ8NCG7 672 aa14.97□□□□□ -0.01
ECM1-202ENST00000369047 CCDC112Q8NEF3 446 aa14.97□□□□□ -0.01
ECM1-202ENST00000369047 SYMPKQ92797 1274 aaKnown RBP14.97□□□□□ -0.01
ECM1-202ENST00000369047 EPSTI1Q96J88 318 aa14.97□□□□□ -0.01
ECM1-202ENST00000369047 C16orf45Q96MC5 204 aaPredicted RBP14.97□□□□□ -0.01
ECM1-202ENST00000369047 PRR29P0C7W0 189 aa14.96□□□□□ -0.01
ECM1-202ENST00000369047 PLCD1P51178 756 aa14.96□□□□□ -0.01
ECM1-202ENST00000369047 PTPN14Q15678 1187 aa14.96□□□□□ -0.01
ECM1-202ENST00000369047 CFAP100Q494V2 611 aa14.96□□□□□ -0.01
ECM1-202ENST00000369047 TEX11Q8IYF3 940 aa14.96□□□□□ -0.01
ECM1-202ENST00000369047 CCAR2Q8N163 923 aaKnown RBP14.96□□□□□ -0.01
ECM1-202ENST00000369047 IQUBQ8NA54 791 aa14.96□□□□□ -0.01
ECM1-202ENST00000369047 NEDD1Q8NHV4 660 aa14.96□□□□□ -0.01
ECM1-202ENST00000369047 DHX58Q96C10 678 aa14.96□□□□□ -0.01
ECM1-202ENST00000369047 PAGE5Q96GU1 130 aa14.96□□□□□ -0.01
ECM1-202ENST00000369047 GAKO14976 1311 aa14.96□□□□□ -0.01
ECM1-202ENST00000369047 PALM3A6NDB9 673 aaPredicted RBP14.96□□□□□ -0.02
ECM1-202ENST00000369047 C6orf229H3BNL8 230 aa14.96□□□□□ -0.02
ECM1-202ENST00000369047 CCP110O43303 1012 aa14.96□□□□□ -0.02
ECM1-202ENST00000369047 LONP1P36776 959 aaKnown RBP14.96□□□□□ -0.02
ECM1-202ENST00000369047 RASSF7Q02833 373 aa14.96□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms