RNA–Protein interactions for RNA: ENST00000368905.8

SCNM1-202, Transcript of sodium channel modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCNM1, Length 2,016 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-202ENST00000368905 KIF22Q14807 665 aa11.3□□□□□ -0.6
SCNM1-202ENST00000368905 PROSER3Q2NL68 480 aa11.3□□□□□ -0.6
SCNM1-202ENST00000368905 NFATC2IPQ8NCF5 419 aa11.3□□□□□ -0.6
SCNM1-202ENST00000368905 FBXO41Q8TF61 875 aa11.3□□□□□ -0.6
SCNM1-202ENST00000368905 NOL10Q9BSC4 688 aaKnown RBP11.3□□□□□ -0.6
SCNM1-202ENST00000368905 ECHDC1Q9NTX5 307 aa11.3□□□□□ -0.6
SCNM1-202ENST00000368905 ZNHIT6Q9NWK9 470 aaKnown RBP11.3□□□□□ -0.6
SCNM1-202ENST00000368905 IPPQ9Y573 584 aa11.3□□□□□ -0.6
SCNM1-202ENST00000368905 ERBB4Q15303 1308 aa11.3□□□□□ -0.6
SCNM1-202ENST00000368905 STXBP3O00186 592 aa11.3□□□□□ -0.6
SCNM1-202ENST00000368905 MTRF1O75570 445 aaKnown RBP11.3□□□□□ -0.6
SCNM1-202ENST00000368905 ABL1P00519 1130 aa11.3□□□□□ -0.6
SCNM1-202ENST00000368905 ALDH1B1P30837 517 aa11.3□□□□□ -0.6
SCNM1-202ENST00000368905 CABP4P57796 275 aa11.3□□□□□ -0.6
SCNM1-202ENST00000368905 NSUN2Q08J23 767 aaKnown RBP eCLIP11.3□□□□□ -0.6
SCNM1-202ENST00000368905 PPP2R5CQ13362 524 aa11.3□□□□□ -0.6
SCNM1-202ENST00000368905 KRT72Q14CN4 511 aa11.3□□□□□ -0.6
SCNM1-202ENST00000368905 FAAH2Q6GMR7 532 aa11.3□□□□□ -0.6
SCNM1-202ENST00000368905 CATSPER4Q7RTX7 472 aa11.3□□□□□ -0.6
SCNM1-202ENST00000368905 KIAA0907Q7Z7F0 614 aaPredicted RBP11.3□□□□□ -0.6
SCNM1-202ENST00000368905 ANKRD18AQ8IVF6 992 aa11.3□□□□□ -0.6
SCNM1-202ENST00000368905 PRR7Q8TB68 274 aa11.3□□□□□ -0.6
SCNM1-202ENST00000368905 NACC2Q96BF6 587 aa11.3□□□□□ -0.6
SCNM1-202ENST00000368905 ZBTB9Q96C00 473 aa11.3□□□□□ -0.6
SCNM1-202ENST00000368905 CRISPLD2Q9H0B8 497 aa11.3□□□□□ -0.6
SCNM1-202ENST00000368905 KCTD5Q9NXV2 234 aa11.3□□□□□ -0.6
SCNM1-202ENST00000368905 PRMT3O60678 531 aa11.29□□□□□ -0.6
SCNM1-202ENST00000368905 SLC5A1P13866 664 aa11.29□□□□□ -0.6
SCNM1-202ENST00000368905 STT3AP46977 705 aa11.29□□□□□ -0.6
SCNM1-202ENST00000368905 GTF2A1P52655 376 aaPredicted RBP11.29□□□□□ -0.6
SCNM1-202ENST00000368905 AIMP1Q12904 312 aaKnown RBP11.29□□□□□ -0.6
SCNM1-202ENST00000368905 PRPF4BQ13523 1007 aaKnown RBP11.29□□□□□ -0.6
SCNM1-202ENST00000368905 PDIA6Q15084 440 aa11.29□□□□□ -0.6
SCNM1-202ENST00000368905 CFAP58Q5T655 872 aa11.29□□□□□ -0.6
SCNM1-202ENST00000368905 AP1ARQ63HQ0 302 aa11.29□□□□□ -0.6
SCNM1-202ENST00000368905 ISM2Q6H9L7 571 aa11.29□□□□□ -0.6
SCNM1-202ENST00000368905 LVRNQ6Q4G3 990 aa11.29□□□□□ -0.6
SCNM1-202ENST00000368905 ENAHQ8N8S7 591 aaPredicted RBP11.29□□□□□ -0.6
SCNM1-202ENST00000368905 GSDMBQ8TAX9 411 aa11.29□□□□□ -0.6
SCNM1-202ENST00000368905 ATP6V1E2Q96A05 226 aa11.29□□□□□ -0.6
SCNM1-202ENST00000368905 INTS4Q96HW7 963 aaKnown RBP11.29□□□□□ -0.6
SCNM1-202ENST00000368905 SLC39A3Q9BRY0 314 aa11.29□□□□□ -0.6
SCNM1-202ENST00000368905 METTL22Q9BUU2 404 aaPredicted RBP11.29□□□□□ -0.6
SCNM1-202ENST00000368905 SLC7A5P2Q9GIP4 190 aa11.29□□□□□ -0.6
SCNM1-202ENST00000368905 GPCPD1Q9NPB8 672 aa11.29□□□□□ -0.6
SCNM1-202ENST00000368905 FBXO10Q9UK96 956 aa11.29□□□□□ -0.6
SCNM1-202ENST00000368905 PARP4Q9UKK3 1724 aaKnown RBP11.29□□□□□ -0.6
SCNM1-202ENST00000368905 SPDYE16A6NNV3 312 aaPredicted RBP11.28□□□□□ -0.6
SCNM1-202ENST00000368905 SGSM2O43147 1006 aa11.28□□□□□ -0.6
SCNM1-202ENST00000368905 NBNO60934 754 aa11.28□□□□□ -0.6
SCNM1-202ENST00000368905 DNAJB2P25686 324 aa11.28□□□□□ -0.6
SCNM1-202ENST00000368905 HSPA4P34932 840 aa11.28□□□□□ -0.6
SCNM1-202ENST00000368905 MRE11P49959 708 aa11.28□□□□□ -0.6
SCNM1-202ENST00000368905 ZNF211Q13398 564 aaPredicted RBP11.28□□□□□ -0.6
SCNM1-202ENST00000368905 RTL10Q7L3V2 364 aa11.28□□□□□ -0.6
SCNM1-202ENST00000368905 PNMA8AQ86V59 439 aaPredicted RBP11.28□□□□□ -0.6
SCNM1-202ENST00000368905 APPBP2Q92624 585 aa11.28□□□□□ -0.6
SCNM1-202ENST00000368905 USP6NLQ92738 828 aa11.28□□□□□ -0.6
SCNM1-202ENST00000368905 PCDH11XQ9BZA7 1347 aa11.28□□□□□ -0.6
SCNM1-202ENST00000368905 PCDH11YQ9BZA8 1340 aa11.28□□□□□ -0.6
SCNM1-202ENST00000368905 FSD2A1L4K1 749 aa11.28□□□□□ -0.6
SCNM1-202ENST00000368905 NEURL1BA8MQ27 555 aa11.28□□□□□ -0.6
SCNM1-202ENST00000368905 BAG4O95429 457 aaKnown RBP11.28□□□□□ -0.6
SCNM1-202ENST00000368905 CAP2P40123 477 aa11.28□□□□□ -0.6
SCNM1-202ENST00000368905 PRIM1P49642 420 aaKnown RBP11.28□□□□□ -0.6
SCNM1-202ENST00000368905 MCL1Q07820 350 aa11.28□□□□□ -0.6
SCNM1-202ENST00000368905 SLC39A6Q13433 755 aa11.28□□□□□ -0.6
SCNM1-202ENST00000368905 LAMC2Q13753 1193 aa11.28□□□□□ -0.6
SCNM1-202ENST00000368905 CWF19L2Q2TBE0 894 aaKnown RBP11.28□□□□□ -0.6
SCNM1-202ENST00000368905 PREPLQ4J6C6 727 aaPredicted RBP11.28□□□□□ -0.6
SCNM1-202ENST00000368905 IL31Q6EBC2 164 aa11.28□□□□□ -0.6
SCNM1-202ENST00000368905 SWSAP1Q6NVH7 229 aa11.28□□□□□ -0.6
SCNM1-202ENST00000368905 XAGE3Q8WTP9 111 aa11.28□□□□□ -0.6
SCNM1-202ENST00000368905 CSRNP2Q9H175 543 aa11.28□□□□□ -0.6
SCNM1-202ENST00000368905 UNC45AQ9H3U1 944 aa11.28□□□□□ -0.6
SCNM1-202ENST00000368905 DBNDD1Q9H9R9 158 aa11.28□□□□□ -0.6
SCNM1-202ENST00000368905 IRAK4Q9NWZ3 460 aa11.28□□□□□ -0.6
SCNM1-202ENST00000368905 PA2G4Q9UQ80 394 aaKnown RBP11.28□□□□□ -0.6
SCNM1-202ENST00000368905 RAD50Q92878 1312 aa11.28□□□□□ -0.6
SCNM1-202ENST00000368905 COL15A1P39059 1388 aa11.27□□□□□ -0.6
SCNM1-202ENST00000368905 A0A0B4J203 849 aa11.27□□□□□ -0.61
SCNM1-202ENST00000368905 CYP27B1O15528 508 aa11.27□□□□□ -0.61
SCNM1-202ENST00000368905 ATP2B4P23634 1241 aa11.27□□□□□ -0.61
SCNM1-202ENST00000368905 HSPA1LP34931 641 aa11.27□□□□□ -0.61
SCNM1-202ENST00000368905 ST13P50502 369 aaKnown RBP11.27□□□□□ -0.61
SCNM1-202ENST00000368905 FOXK1P85037 733 aa11.27□□□□□ -0.61
SCNM1-202ENST00000368905 CHRNA2Q15822 529 aa11.27□□□□□ -0.61
SCNM1-202ENST00000368905 KCNV1Q6PIU1 500 aa11.27□□□□□ -0.61
SCNM1-202ENST00000368905 FIP1L1Q6UN15 594 aaKnown RBP11.27□□□□□ -0.61
SCNM1-202ENST00000368905 COPS6Q7L5N1 327 aa11.27□□□□□ -0.61
SCNM1-202ENST00000368905 VPS37DQ86XT2 251 aa11.27□□□□□ -0.61
SCNM1-202ENST00000368905 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.27□□□□□ -0.61
SCNM1-202ENST00000368905 CABLES1Q8TDN4 633 aa11.27□□□□□ -0.61
SCNM1-202ENST00000368905 SUCLG2Q96I99 432 aa11.27□□□□□ -0.61
SCNM1-202ENST00000368905 BAG1Q99933 345 aaPredicted RBP11.27□□□□□ -0.61
SCNM1-202ENST00000368905 ZSWIM6Q9HCJ5 1215 aa11.27□□□□□ -0.61
SCNM1-202ENST00000368905 PRDM11Q9NQV5 511 aa11.27□□□□□ -0.61
SCNM1-202ENST00000368905 TSKSQ9UJT2 592 aa11.27□□□□□ -0.61
SCNM1-202ENST00000368905 NDUFB9Q9Y6M9 179 aa11.27□□□□□ -0.61
SCNM1-202ENST00000368905 WDR17Q8IZU2 1322 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms