RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 TNIP1Q15025 636 aa10.45□□□□□ -0.74
TPM3-213ENST00000368545 PUM3Q15397 648 aaKnown RBP10.45□□□□□ -0.74
TPM3-213ENST00000368545 ZNF394Q53GI3 561 aa10.45□□□□□ -0.74
TPM3-213ENST00000368545 ALG1LQ6GMV1 187 aa10.45□□□□□ -0.74
TPM3-213ENST00000368545 NIM1KQ8IY84 436 aa10.45□□□□□ -0.74
TPM3-213ENST00000368545 GJD3Q8N144 294 aa10.45□□□□□ -0.74
TPM3-213ENST00000368545 NLRP3Q96P20 1036 aa10.45□□□□□ -0.74
TPM3-213ENST00000368545 FSD1Q9BTV5 496 aa10.45□□□□□ -0.74
TPM3-213ENST00000368545 TMX4Q9H1E5 349 aaPredicted RBP10.45□□□□□ -0.74
TPM3-213ENST00000368545 GBA2Q9HCG7 927 aaPredicted RBP10.45□□□□□ -0.74
TPM3-213ENST00000368545 CYLDQ9NQC7 956 aa10.45□□□□□ -0.74
TPM3-213ENST00000368545 TMPRSS4Q9NRS4 437 aa10.45□□□□□ -0.74
TPM3-213ENST00000368545 TMA7Q9Y2S6 64 aaKnown RBP10.45□□□□□ -0.74
TPM3-213ENST00000368545 PCDHGB7Q9Y5F8 929 aa10.45□□□□□ -0.74
TPM3-213ENST00000368545 MYH7P12883 1935 aa10.45□□□□□ -0.74
TPM3-213ENST00000368545 GORABQ5T7V8 394 aa10.45□□□□□ -0.74
TPM3-213ENST00000368545 ARMC5Q96C12 935 aa10.45□□□□□ -0.74
TPM3-213ENST00000368545 PIF1Q9H611 641 aa10.45□□□□□ -0.74
TPM3-213ENST00000368545 TLDC2A0PJX2 215 aa10.44□□□□□ -0.74
TPM3-213ENST00000368545 FKTNO75072 461 aa10.44□□□□□ -0.74
TPM3-213ENST00000368545 TRPA1O75762 1119 aa10.44□□□□□ -0.74
TPM3-213ENST00000368545 RACK1P63244 317 aaKnown RBP10.44□□□□□ -0.74
TPM3-213ENST00000368545 VASH1Q7L8A9 365 aaPredicted RBP10.44□□□□□ -0.74
TPM3-213ENST00000368545 ANKRD18AQ8IVF6 992 aa10.44□□□□□ -0.74
TPM3-213ENST00000368545 STAG2Q8N3U4 1231 aa10.44□□□□□ -0.74
TPM3-213ENST00000368545 XAGE2Q96GT9 111 aa10.44□□□□□ -0.74
TPM3-213ENST00000368545 POTEB3A0JP26 581 aa10.43□□□□□ -0.74
TPM3-213ENST00000368545 IFIT1P09914 478 aaKnown RBP10.43□□□□□ -0.74
TPM3-213ENST00000368545 RABEP1Q15276 862 aa10.43□□□□□ -0.74
TPM3-213ENST00000368545 LRRFIP1Q32MZ4 808 aaKnown RBP10.43□□□□□ -0.74
TPM3-213ENST00000368545 TTC39AQ5SRH9 613 aa10.43□□□□□ -0.74
TPM3-213ENST00000368545 POTEBQ6S5H4 581 aa10.43□□□□□ -0.74
TPM3-213ENST00000368545 KIAA1211Q6ZU35 1233 aa10.43□□□□□ -0.74
TPM3-213ENST00000368545 LPIN2Q92539 896 aa10.43□□□□□ -0.74
TPM3-213ENST00000368545 ZNF512BQ96KM6 892 aaPredicted RBP10.43□□□□□ -0.74
TPM3-213ENST00000368545 MTRQ99707 1265 aa10.43□□□□□ -0.74
TPM3-213ENST00000368545 SEC31BQ9NQW1 1179 aa10.43□□□□□ -0.74
TPM3-213ENST00000368545 ZNF277Q9NRM2 450 aaPredicted RBP10.43□□□□□ -0.74
TPM3-213ENST00000368545 GJA3Q9Y6H8 435 aa10.43□□□□□ -0.74
TPM3-213ENST00000368545 TAF1P21675 1872 aa10.43□□□□□ -0.74
TPM3-213ENST00000368545 SLC5A1P13866 664 aa10.43□□□□□ -0.74
TPM3-213ENST00000368545 ANAPC15P60006 121 aa10.43□□□□□ -0.74
TPM3-213ENST00000368545 SREBF2Q12772 1141 aa10.43□□□□□ -0.74
TPM3-213ENST00000368545 CWC27Q6UX04 472 aaKnown RBP10.43□□□□□ -0.74
TPM3-213ENST00000368545 KBTBD3Q8NAB2 608 aa10.43□□□□□ -0.74
TPM3-213ENST00000368545 SNX21Q969T3 373 aa10.43□□□□□ -0.74
TPM3-213ENST00000368545 KIF2CQ99661 725 aa10.43□□□□□ -0.74
TPM3-213ENST00000368545 BSDC1Q9NW68 430 aaPredicted RBP10.43□□□□□ -0.74
TPM3-213ENST00000368545 PAG1Q9NWQ8 432 aa10.43□□□□□ -0.74
TPM3-213ENST00000368545 DDX41Q9UJV9 622 aaKnown RBP10.43□□□□□ -0.74
TPM3-213ENST00000368545 INPP5FQ9Y2H2 1132 aa10.43□□□□□ -0.74
TPM3-213ENST00000368545 A6NJY4 79 aa10.42□□□□□ -0.74
TPM3-213ENST00000368545 TRAF5O00463 557 aa10.42□□□□□ -0.74
TPM3-213ENST00000368545 ST18O60284 1047 aa10.42□□□□□ -0.74
TPM3-213ENST00000368545 FGFR2P21802 821 aa10.42□□□□□ -0.74
TPM3-213ENST00000368545 ZNF157P51786 506 aaPredicted RBP10.42□□□□□ -0.74
TPM3-213ENST00000368545 DNM1Q05193 864 aaKnown RBP10.42□□□□□ -0.74
TPM3-213ENST00000368545 HSCBQ8IWL3 235 aa10.42□□□□□ -0.74
TPM3-213ENST00000368545 ZNF516Q92618 1163 aa10.42□□□□□ -0.74
TPM3-213ENST00000368545 CRELD1Q96HD1 420 aa10.42□□□□□ -0.74
TPM3-213ENST00000368545 ADORA1P30542 326 aa10.42□□□□□ -0.74
TPM3-213ENST00000368545 EPS15P42566 896 aa10.42□□□□□ -0.74
TPM3-213ENST00000368545 RBL2Q08999 1139 aa10.42□□□□□ -0.74
TPM3-213ENST00000368545 IL17RAQ96F46 866 aa10.42□□□□□ -0.74
TPM3-213ENST00000368545 MYO19Q96H55 970 aa10.42□□□□□ -0.74
TPM3-213ENST00000368545 COL4A1P02462 1669 aa10.41□□□□□ -0.74
TPM3-213ENST00000368545 H7C1D1 291 aa10.41□□□□□ -0.74
TPM3-213ENST00000368545 S1PR4O95977 384 aa10.41□□□□□ -0.74
TPM3-213ENST00000368545 UQCRFS1P1P0C7P4 283 aa10.41□□□□□ -0.74
TPM3-213ENST00000368545 CHRNDQ07001 517 aa10.41□□□□□ -0.74
TPM3-213ENST00000368545 ETFBKMTQ8IXQ9 262 aa10.41□□□□□ -0.74
TPM3-213ENST00000368545 MAP4K5Q9Y4K4 846 aa10.41□□□□□ -0.74
TPM3-213ENST00000368545 AK5Q9Y6K8 562 aa10.41□□□□□ -0.74
TPM3-213ENST00000368545 MED23Q9ULK4 1368 aa10.41□□□□□ -0.74
TPM3-213ENST00000368545 DOCK2Q92608 1830 aa10.41□□□□□ -0.74
TPM3-213ENST00000368545 GPR25O00155 361 aa10.4□□□□□ -0.74
TPM3-213ENST00000368545 GOLIM4O00461 696 aa10.4□□□□□ -0.74
TPM3-213ENST00000368545 BRD2P25440 801 aaKnown RBP10.4□□□□□ -0.74
TPM3-213ENST00000368545 ARID5AQ03989 594 aa10.4□□□□□ -0.74
TPM3-213ENST00000368545 NMIQ13287 307 aaPredicted RBP10.4□□□□□ -0.74
TPM3-213ENST00000368545 PPP1R18Q6NYC8 613 aa10.4□□□□□ -0.74
TPM3-213ENST00000368545 DDX46Q7L014 1031 aaKnown RBP10.4□□□□□ -0.74
TPM3-213ENST00000368545 SNED1Q8TER0 1413 aa10.4□□□□□ -0.74
TPM3-213ENST00000368545 OTUD5Q96G74 571 aa10.4□□□□□ -0.74
TPM3-213ENST00000368545 CSRNP1Q96S65 589 aa10.4□□□□□ -0.74
TPM3-213ENST00000368545 LSG1Q9H089 658 aaKnown RBP10.4□□□□□ -0.74
TPM3-213ENST00000368545 IL25Q9H293 177 aa10.4□□□□□ -0.74
TPM3-213ENST00000368545 USP3Q9Y6I4 520 aa10.4□□□□□ -0.74
TPM3-213ENST00000368545 MYH13Q9UKX3 1938 aa10.4□□□□□ -0.74
TPM3-213ENST00000368545 ZFYP08048 801 aaPredicted RBP10.4□□□□□ -0.74
TPM3-213ENST00000368545 HSPA4P34932 840 aa10.4□□□□□ -0.74
TPM3-213ENST00000368545 TM4SF4P48230 202 aa10.4□□□□□ -0.74
TPM3-213ENST00000368545 PSMA6P60900 246 aaKnown RBP10.4□□□□□ -0.74
TPM3-213ENST00000368545 ORC1Q13415 861 aa10.4□□□□□ -0.74
TPM3-213ENST00000368545 TTF1Q15361 905 aaPredicted RBP10.4□□□□□ -0.74
TPM3-213ENST00000368545 EDEM1Q92611 657 aa10.4□□□□□ -0.74
TPM3-213ENST00000368545 DPF2Q92785 391 aa10.4□□□□□ -0.74
TPM3-213ENST00000368545 EDC3Q96F86 508 aaKnown RBP10.4□□□□□ -0.74
TPM3-213ENST00000368545 ERO1AQ96HE7 468 aa10.4□□□□□ -0.74
TPM3-213ENST00000368545 ZSWIM4Q9H7M6 989 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms