RNA–Protein interactions for RNA: ENST00000368527.7

TPM3-209, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-209ENST00000368527 DHX58Q96C10 678 aa11.59□□□□□ -0.55
TPM3-209ENST00000368527 TUBB2BQ9BVA1 445 aa11.59□□□□□ -0.55
TPM3-209ENST00000368527 L2HGDHQ9H9P8 463 aa11.59□□□□□ -0.55
TPM3-209ENST00000368527 RWDD2AQ9UIY3 292 aa11.59□□□□□ -0.55
TPM3-209ENST00000368527 FAM205AQ6ZU69 1335 aa11.59□□□□□ -0.55
TPM3-209ENST00000368527 MYO3BQ8WXR4 1341 aa11.59□□□□□ -0.55
TPM3-209ENST00000368527 SYNRGQ9UMZ2 1314 aa11.59□□□□□ -0.55
TPM3-209ENST00000368527 A0A087WWV3 80 aa11.58□□□□□ -0.56
TPM3-209ENST00000368527 ESYT2A0FGR8 921 aa11.58□□□□□ -0.56
TPM3-209ENST00000368527 ATP2B1P20020 1258 aa11.58□□□□□ -0.56
TPM3-209ENST00000368527 BMP6P22004 513 aa11.58□□□□□ -0.56
TPM3-209ENST00000368527 CUL4BQ13620 913 aa11.58□□□□□ -0.56
TPM3-209ENST00000368527 KCNB1Q14721 858 aa11.58□□□□□ -0.56
TPM3-209ENST00000368527 ARID5BQ14865 1188 aa11.58□□□□□ -0.56
TPM3-209ENST00000368527 NFIXQ14938 502 aa11.58□□□□□ -0.56
TPM3-209ENST00000368527 NR1I3Q14994 352 aa11.58□□□□□ -0.56
TPM3-209ENST00000368527 CDKAL1Q5VV42 579 aa11.58□□□□□ -0.56
TPM3-209ENST00000368527 DTHD1Q6ZMT9 781 aa11.58□□□□□ -0.56
TPM3-209ENST00000368527 C16orf86Q6ZW13 317 aa11.58□□□□□ -0.56
TPM3-209ENST00000368527 HOMER1Q86YM7 354 aa11.58□□□□□ -0.56
TPM3-209ENST00000368527 CNGA4Q8IV77 575 aa11.58□□□□□ -0.56
TPM3-209ENST00000368527 CMTR1Q8N1G2 835 aaKnown RBP11.58□□□□□ -0.56
TPM3-209ENST00000368527 NEDD1Q8NHV4 660 aa11.58□□□□□ -0.56
TPM3-209ENST00000368527 ZNF592Q92610 1267 aa11.58□□□□□ -0.56
TPM3-209ENST00000368527 GJD4Q96KN9 370 aaPredicted RBP11.58□□□□□ -0.56
TPM3-209ENST00000368527 BAG1Q99933 345 aaPredicted RBP11.58□□□□□ -0.56
TPM3-209ENST00000368527 RNF39Q9H2S5 420 aa11.58□□□□□ -0.56
TPM3-209ENST00000368527 C6orf50Q9HD87 102 aa11.58□□□□□ -0.56
TPM3-209ENST00000368527 BARHL2Q9NY43 387 aa11.58□□□□□ -0.56
TPM3-209ENST00000368527 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.58□□□□□ -0.562e-10■■■■□ 19.6
TPM3-209ENST00000368527 PLIN4Q96Q06 1357 aa11.57□□□□□ -0.56
TPM3-209ENST00000368527 BAZ2AQ9UIF9 1905 aaKnown RBP11.57□□□□□ -0.56
TPM3-209ENST00000368527 MYH2Q9UKX2 1941 aa11.57□□□□□ -0.56
TPM3-209ENST00000368527 TNRC6CQ9HCJ0 1690 aaKnown RBP11.57□□□□□ -0.56
TPM3-209ENST00000368527 VWA3AA6NCI4 1184 aa11.57□□□□□ -0.56
TPM3-209ENST00000368527 PALM3A6NDB9 673 aaPredicted RBP11.57□□□□□ -0.56
TPM3-209ENST00000368527 AKR1B15C9JRZ8 316 aaPredicted RBP11.57□□□□□ -0.56
TPM3-209ENST00000368527 UBE2Q2LH0YL09 131 aa11.57□□□□□ -0.56
TPM3-209ENST00000368527 KLRK1P26718 216 aa11.57□□□□□ -0.56
TPM3-209ENST00000368527 GRIN1Q05586 938 aa11.57□□□□□ -0.56
TPM3-209ENST00000368527 ZNF174Q15697 407 aa11.57□□□□□ -0.56
TPM3-209ENST00000368527 E2F4Q16254 413 aa11.57□□□□□ -0.56
TPM3-209ENST00000368527 FAM47AQ5JRC9 791 aa11.57□□□□□ -0.56
TPM3-209ENST00000368527 ZNF658Q5TYW1 1059 aaPredicted RBP11.57□□□□□ -0.56
TPM3-209ENST00000368527 ISM2Q6H9L7 571 aa11.57□□□□□ -0.56
TPM3-209ENST00000368527 PIK3AP1Q6ZUJ8 805 aa11.57□□□□□ -0.56
TPM3-209ENST00000368527 ZNF710Q8N1W2 664 aa11.57□□□□□ -0.56
TPM3-209ENST00000368527 PDILTQ8N807 584 aa11.57□□□□□ -0.56
TPM3-209ENST00000368527 ZNF397Q8NF99 534 aaPredicted RBP11.57□□□□□ -0.56
TPM3-209ENST00000368527 SH3RF3Q8TEJ3 882 aaPredicted RBP11.57□□□□□ -0.56
TPM3-209ENST00000368527 IQCDQ96DY2 449 aa11.57□□□□□ -0.56
TPM3-209ENST00000368527 RTFDC1Q9BY42 306 aaPredicted RBP11.57□□□□□ -0.56
TPM3-209ENST00000368527 CCSER1Q9C0I3 900 aa11.57□□□□□ -0.56
TPM3-209ENST00000368527 CD209Q9NNX6 404 aa11.57□□□□□ -0.56
TPM3-209ENST00000368527 GAKO14976 1311 aa11.57□□□□□ -0.56
TPM3-209ENST00000368527 KLRG2A4D1S0 409 aaPredicted RBP11.56□□□□□ -0.56
TPM3-209ENST00000368527 LRRC10BA6NIK2 292 aa11.56□□□□□ -0.56
TPM3-209ENST00000368527 H7C1D1 291 aa11.56□□□□□ -0.56
TPM3-209ENST00000368527 SLC26A4O43511 780 aa11.56□□□□□ -0.56
TPM3-209ENST00000368527 UFL1O94874 794 aa11.56□□□□□ -0.56
TPM3-209ENST00000368527 PARP1P09874 1014 aaKnown RBP11.56□□□□□ -0.56
TPM3-209ENST00000368527 USP17L8P0C7I0 530 aa11.56□□□□□ -0.56
TPM3-209ENST00000368527 PRR29P0C7W0 189 aa11.56□□□□□ -0.56
TPM3-209ENST00000368527 NOVP48745 357 aa11.56□□□□□ -0.56
TPM3-209ENST00000368527 AMPD3Q01432 767 aa11.56□□□□□ -0.56
TPM3-209ENST00000368527 NCBP1Q09161 790 aaKnown RBP11.56□□□□□ -0.56
TPM3-209ENST00000368527 SPECC1Q5M775 1068 aa11.56□□□□□ -0.56
TPM3-209ENST00000368527 SOGA3Q5TF21 947 aa11.56□□□□□ -0.56
TPM3-209ENST00000368527 PRR5LQ6MZQ0 368 aa11.56□□□□□ -0.56
TPM3-209ENST00000368527 PPP1R18Q6NYC8 613 aa11.56□□□□□ -0.56
TPM3-209ENST00000368527 PDXDC2PQ6P474 469 aa11.56□□□□□ -0.56
TPM3-209ENST00000368527 FAM196AQ6ZSG2 479 aa11.56□□□□□ -0.56
TPM3-209ENST00000368527 TEX11Q8IYF3 940 aa11.56□□□□□ -0.56
TPM3-209ENST00000368527 NAV1Q8NEY1 1877 aa11.56□□□□□ -0.56
TPM3-209ENST00000368527 RRP36Q96EU6 259 aaKnown RBP11.56□□□□□ -0.56
TPM3-209ENST00000368527 EPSTI1Q96J88 318 aa11.56□□□□□ -0.56
TPM3-209ENST00000368527 NAP1L4Q99733 375 aaKnown RBP11.56□□□□□ -0.56
TPM3-209ENST00000368527 LRRC27Q9C0I9 530 aa11.56□□□□□ -0.56
TPM3-209ENST00000368527 ZMYND12Q9H0C1 365 aa11.56□□□□□ -0.56
TPM3-209ENST00000368527 TRMT1Q9NXH9 659 aaKnown RBP11.56□□□□□ -0.56
TPM3-209ENST00000368527 SEC63Q9UGP8 760 aaKnown RBP11.56□□□□□ -0.56
TPM3-209ENST00000368527 SWAP70Q9UH65 585 aa11.56□□□□□ -0.56
TPM3-209ENST00000368527 LIMA1Q9UHB6 759 aaKnown RBP11.56□□□□□ -0.56
TPM3-209ENST00000368527 MAD2L2Q9UI95 211 aa11.56□□□□□ -0.56
TPM3-209ENST00000368527 TRPC5Q9UL62 973 aaPredicted RBP11.56□□□□□ -0.56
TPM3-209ENST00000368527 USP27XA6NNY8 438 aa11.55□□□□□ -0.56
TPM3-209ENST00000368527 PPP1R3GB7ZBB8 358 aa11.55□□□□□ -0.56
TPM3-209ENST00000368527 M0R2N6 131 aa11.55□□□□□ -0.56
TPM3-209ENST00000368527 FOXN1O15353 648 aa11.55□□□□□ -0.56
TPM3-209ENST00000368527 CYP2D6P10635 497 aa11.55□□□□□ -0.56
TPM3-209ENST00000368527 RASA1P20936 1047 aa11.55□□□□□ -0.56
TPM3-209ENST00000368527 UBA7P41226 1012 aa11.55□□□□□ -0.56
TPM3-209ENST00000368527 STAT6P42226 847 aa11.55□□□□□ -0.56
TPM3-209ENST00000368527 BTDP43251 543 aa11.55□□□□□ -0.56
TPM3-209ENST00000368527 FMR1Q06787 632 aaKnown RBP eCLIP11.55□□□□□ -0.56
TPM3-209ENST00000368527 PAK1Q13153 545 aa11.55□□□□□ -0.56
TPM3-209ENST00000368527 ASPRV1Q53RT3 343 aa11.55□□□□□ -0.56
TPM3-209ENST00000368527 WWC2Q6AWC2 1192 aa11.55□□□□□ -0.56
TPM3-209ENST00000368527 SP8Q8IXZ3 490 aa11.55□□□□□ -0.56
TPM3-209ENST00000368527 SMAP1Q8IYB5 467 aaPredicted RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms