RNA–Protein interactions for RNA: ENST00000368311.5

SSR2-202, Transcript of signal sequence receptor subunit 2, humanhuman

TSL 1 (best)

Gene SSR2, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2-202ENST00000368311 MROH7Q68CQ1 1323 aa9.35□□□□□ -0.91
SSR2-202ENST00000368311 GTPBP6O43824 516 aaPredicted RBP9.35□□□□□ -0.91
SSR2-202ENST00000368311 CAVIN2O95810 425 aa9.35□□□□□ -0.91
SSR2-202ENST00000368311 COG2Q14746 738 aa9.35□□□□□ -0.91
SSR2-202ENST00000368311 HLFQ16534 295 aa9.35□□□□□ -0.91
SSR2-202ENST00000368311 PRPF38AQ8NAV1 312 aaKnown RBP9.35□□□□□ -0.91
SSR2-202ENST00000368311 AKT1S1Q96B36 256 aa9.35□□□□□ -0.91
SSR2-202ENST00000368311 FAM81BQ96LP2 452 aa9.35□□□□□ -0.91
SSR2-202ENST00000368311 SEC31BQ9NQW1 1179 aa9.35□□□□□ -0.91
SSR2-202ENST00000368311 KDM4AO75164 1064 aa9.35□□□□□ -0.91
SSR2-202ENST00000368311 HAND2P61296 217 aa9.35□□□□□ -0.91
SSR2-202ENST00000368311 MTX1Q13505 466 aa9.35□□□□□ -0.91
SSR2-202ENST00000368311 RILPL1Q5EBL4 403 aa9.35□□□□□ -0.91
SSR2-202ENST00000368311 C15orf52Q6ZUT6 534 aaKnown RBP9.35□□□□□ -0.91
SSR2-202ENST00000368311 NUDT18Q6ZVK8 323 aa9.35□□□□□ -0.91
SSR2-202ENST00000368311 STAG1Q8WVM7 1258 aa9.35□□□□□ -0.91
SSR2-202ENST00000368311 NOX5Q96PH1 765 aa9.35□□□□□ -0.91
SSR2-202ENST00000368311 TNNQ9UQP3 1299 aa9.35□□□□□ -0.91
SSR2-202ENST00000368311 JAG2Q9Y219 1238 aa9.35□□□□□ -0.91
SSR2-202ENST00000368311 PCDHA1Q9Y5I3 950 aa9.35□□□□□ -0.91
SSR2-202ENST00000368311 ZBTB7BO15156 539 aaPredicted RBP9.34□□□□□ -0.91
SSR2-202ENST00000368311 PPATQ06203 517 aa9.34□□□□□ -0.91
SSR2-202ENST00000368311 DTHD1Q6ZMT9 781 aa9.34□□□□□ -0.91
SSR2-202ENST00000368311 REXO1Q8N1G1 1221 aaKnown RBP9.34□□□□□ -0.91
SSR2-202ENST00000368311 NEK9Q8TD19 979 aa9.34□□□□□ -0.91
SSR2-202ENST00000368311 NSUN6Q8TEA1 469 aaKnown RBP9.34□□□□□ -0.91
SSR2-202ENST00000368311 UTYO14607 1347 aa9.34□□□□□ -0.91
SSR2-202ENST00000368311 ERLIN2O94905 339 aa9.34□□□□□ -0.91
SSR2-202ENST00000368311 CFBP00751 764 aa9.34□□□□□ -0.91
SSR2-202ENST00000368311 PPFIBP1Q86W92 1011 aa9.34□□□□□ -0.91
SSR2-202ENST00000368311 DDX49Q9Y6V7 483 aaKnown RBP9.34□□□□□ -0.91
SSR2-202ENST00000368311 GAS7O60861 476 aa9.34□□□□□ -0.91
SSR2-202ENST00000368311 MYL3P08590 195 aa9.34□□□□□ -0.91
SSR2-202ENST00000368311 MECOMQ03112 1051 aa9.34□□□□□ -0.91
SSR2-202ENST00000368311 PPIL2Q13356 520 aa9.34□□□□□ -0.91
SSR2-202ENST00000368311 MAP3K11Q16584 847 aa9.34□□□□□ -0.91
SSR2-202ENST00000368311 RPUSD2Q8IZ73 545 aaKnown RBP9.34□□□□□ -0.91
SSR2-202ENST00000368311 C7orf31Q8N865 590 aa9.34□□□□□ -0.91
SSR2-202ENST00000368311 DDX12PQ92771 950 aa9.34□□□□□ -0.91
SSR2-202ENST00000368311 UBA5Q9GZZ9 404 aa9.34□□□□□ -0.91
SSR2-202ENST00000368311 PSTPIP2Q9H939 334 aa9.34□□□□□ -0.91
SSR2-202ENST00000368311 STAG3L1P0CL83 205 aa9.34□□□□□ -0.92
SSR2-202ENST00000368311 SPAG1Q07617 926 aa9.34□□□□□ -0.92
SSR2-202ENST00000368311 ALCAMQ13740 583 aa9.34□□□□□ -0.92
SSR2-202ENST00000368311 RUFY4Q6ZNE9 571 aa9.34□□□□□ -0.92
SSR2-202ENST00000368311 PLEKHH3Q7Z736 793 aa9.34□□□□□ -0.92
SSR2-202ENST00000368311 DGKHQ86XP1 1220 aa9.34□□□□□ -0.92
SSR2-202ENST00000368311 SHPRHQ149N8 1683 aa9.33□□□□□ -0.92
SSR2-202ENST00000368311 SLC26A4O43511 780 aa9.33□□□□□ -0.92
SSR2-202ENST00000368311 STRNO43815 780 aa9.33□□□□□ -0.92
SSR2-202ENST00000368311 KIF11P52732 1056 aa9.33□□□□□ -0.92
SSR2-202ENST00000368311 SLC9C1Q4G0N8 1177 aa9.33□□□□□ -0.92
SSR2-202ENST00000368311 PROCA1Q8NCQ7 364 aaPredicted RBP9.33□□□□□ -0.92
SSR2-202ENST00000368311 DEPTORQ8TB45 409 aa9.33□□□□□ -0.92
SSR2-202ENST00000368311 CALUO43852 315 aaPredicted RBP9.33□□□□□ -0.92
SSR2-202ENST00000368311 EFCAB14O75071 495 aa9.33□□□□□ -0.92
SSR2-202ENST00000368311 ZBTB48P10074 688 aaPredicted RBP9.33□□□□□ -0.92
SSR2-202ENST00000368311 STAT6P42226 847 aa9.33□□□□□ -0.92
SSR2-202ENST00000368311 NAP1L1P55209 391 aaKnown RBP9.33□□□□□ -0.92
SSR2-202ENST00000368311 RASA3Q14644 834 aa9.33□□□□□ -0.92
SSR2-202ENST00000368311 FSD2A1L4K1 749 aa9.33□□□□□ -0.92
SSR2-202ENST00000368311 KCNQ4P56696 695 aa9.33□□□□□ -0.92
SSR2-202ENST00000368311 POSTNQ15063 836 aa9.33□□□□□ -0.92
SSR2-202ENST00000368311 WDR44Q5JSH3 913 aa9.33□□□□□ -0.92
SSR2-202ENST00000368311 PPP1R2P3Q6NXS1 205 aa9.33□□□□□ -0.92
SSR2-202ENST00000368311 MAGEF1Q9HAY2 307 aa9.33□□□□□ -0.92
SSR2-202ENST00000368311 ARID4AP29374 1257 aaPredicted RBP9.33□□□□□ -0.92
SSR2-202ENST00000368311 ADD2P35612 726 aa9.33□□□□□ -0.92
SSR2-202ENST00000368311 IPO9Q96P70 1041 aaKnown RBP9.33□□□□□ -0.92
SSR2-202ENST00000368311 PARNO95453 639 aaKnown RBP9.32□□□□□ -0.92
SSR2-202ENST00000368311 FNBP1Q96RU3 617 aa9.32□□□□□ -0.92
SSR2-202ENST00000368311 USP44Q9H0E7 712 aa9.32□□□□□ -0.92
SSR2-202ENST00000368311 DEF6Q9H4E7 631 aa9.32□□□□□ -0.92
SSR2-202ENST00000368311 STK39Q9UEW8 545 aa9.32□□□□□ -0.92
SSR2-202ENST00000368311 PUF60Q9UHX1 559 aaKnown RBP9.32□□□□□ -0.92
SSR2-202ENST00000368311 DNM3Q9UQ16 869 aa9.32□□□□□ -0.92
SSR2-202ENST00000368311 RNF207Q6ZRF8 634 aa9.32□□□□□ -0.92
SSR2-202ENST00000368311 FCHSD1Q86WN1 690 aa9.32□□□□□ -0.92
SSR2-202ENST00000368311 PLVAPQ9BX97 442 aa9.32□□□□□ -0.92
SSR2-202ENST00000368311 ZCCHC17Q9NP64 241 aaKnown RBP9.32□□□□□ -0.92
SSR2-202ENST00000368311 SALL1Q9NSC2 1324 aa9.32□□□□□ -0.92
SSR2-202ENST00000368311 STXBP3O00186 592 aa9.32□□□□□ -0.92
SSR2-202ENST00000368311 CSF1RP07333 972 aa9.32□□□□□ -0.92
SSR2-202ENST00000368311 LIG1P18858 919 aa9.32□□□□□ -0.92
SSR2-202ENST00000368311 NFKBIAP25963 317 aa9.32□□□□□ -0.92
SSR2-202ENST00000368311 PRPHP41219 470 aa9.32□□□□□ -0.92
SSR2-202ENST00000368311 IFI16Q16666 785 aaKnown RBP9.32□□□□□ -0.92
SSR2-202ENST00000368311 SPRYD3Q8NCJ5 442 aa9.32□□□□□ -0.92
SSR2-202ENST00000368311 SH3GLB2Q9NR46 395 aa9.32□□□□□ -0.92
SSR2-202ENST00000368311 EHD2Q9NZN4 543 aa9.32□□□□□ -0.92
SSR2-202ENST00000368311 TESPA1A2RU30 521 aaPredicted RBP9.32□□□□□ -0.92
SSR2-202ENST00000368311 SFNP31947 248 aa9.32□□□□□ -0.92
SSR2-202ENST00000368311 TNFAIP2Q03169 654 aa9.32□□□□□ -0.92
SSR2-202ENST00000368311 CCDC40Q4G0X9 1142 aa9.32□□□□□ -0.92
SSR2-202ENST00000368311 ZBTB33Q86T24 672 aa9.32□□□□□ -0.92
SSR2-202ENST00000368311 NAP1L5Q96NT1 182 aaPredicted RBP9.32□□□□□ -0.92
SSR2-202ENST00000368311 DEFB129Q9H1M3 183 aa9.32□□□□□ -0.92
SSR2-202ENST00000368311 FRMD4BQ9Y2L6 1034 aa9.32□□□□□ -0.92
SSR2-202ENST00000368311 MAP2K2P36507 400 aa9.31□□□□□ -0.92
SSR2-202ENST00000368311 IQCEQ6IPM2 695 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms