RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 CTNND2Q9UQB3 1225 aa16.18■□□□□ 0.18
CD48-201ENST00000368045 MAST2Q6P0Q8 1798 aa16.18■□□□□ 0.18
CD48-201ENST00000368045 LAMB1P07942 1786 aa16.17■□□□□ 0.18
CD48-201ENST00000368045 WTIPA6NIX2 430 aaPredicted RBP16.17■□□□□ 0.18
CD48-201ENST00000368045 TSPY2A6NKD2 308 aa16.17■□□□□ 0.18
CD48-201ENST00000368045 PAK1Q13153 545 aa16.17■□□□□ 0.18
CD48-201ENST00000368045 NOM1Q5C9Z4 860 aaKnown RBP16.17■□□□□ 0.18
CD48-201ENST00000368045 ZNF658Q5TYW1 1059 aaPredicted RBP16.17■□□□□ 0.18
CD48-201ENST00000368045 GALNT17Q6IS24 598 aa16.17■□□□□ 0.18
CD48-201ENST00000368045 TMTC1Q8IUR5 882 aa16.17■□□□□ 0.18
CD48-201ENST00000368045 BLIDQ8IZY5 108 aa16.17■□□□□ 0.18
CD48-201ENST00000368045 NLRP3Q96P20 1036 aa16.17■□□□□ 0.18
CD48-201ENST00000368045 KAT14Q9H8E8 782 aa16.17■□□□□ 0.18
CD48-201ENST00000368045 TTF2Q9UNY4 1162 aaKnown RBP16.17■□□□□ 0.18
CD48-201ENST00000368045 KIF5CO60282 957 aa16.16■□□□□ 0.18
CD48-201ENST00000368045 MYL1P05976 194 aa16.16■□□□□ 0.18
CD48-201ENST00000368045 FAM47AQ5JRC9 791 aa16.16■□□□□ 0.18
CD48-201ENST00000368045 RC3H1Q5TC82 1133 aaKnown RBP16.16■□□□□ 0.18
CD48-201ENST00000368045 RRAGBQ5VZM2 374 aa16.16■□□□□ 0.18
CD48-201ENST00000368045 RCSD1Q6JBY9 416 aa16.16■□□□□ 0.18
CD48-201ENST00000368045 C4orf32Q8N8J7 132 aa16.16■□□□□ 0.18
CD48-201ENST00000368045 DAGLBQ8NCG7 672 aa16.16■□□□□ 0.18
CD48-201ENST00000368045 GOLGA1Q92805 767 aa16.16■□□□□ 0.18
CD48-201ENST00000368045 MRPL44Q9H9J2 332 aaKnown RBP16.16■□□□□ 0.18
CD48-201ENST00000368045 PCDHA4Q9UN74 947 aa16.16■□□□□ 0.18
CD48-201ENST00000368045 MYH2Q9UKX2 1941 aa16.16■□□□□ 0.18
CD48-201ENST00000368045 ROBO3Q96MS0 1386 aa16.16■□□□□ 0.18
CD48-201ENST00000368045 SOWAHDA6NJG2 315 aa16.15■□□□□ 0.18
CD48-201ENST00000368045 CASP1P29466 404 aa16.15■□□□□ 0.18
CD48-201ENST00000368045 KRT31Q15323 416 aa16.15■□□□□ 0.18
CD48-201ENST00000368045 RAD9BQ6WBX8 426 aa16.15■□□□□ 0.18
CD48-201ENST00000368045 ZNF771Q7L3S4 317 aaPredicted RBP16.15■□□□□ 0.18
CD48-201ENST00000368045 CCDC12Q8WUD4 166 aaPredicted RBP16.15■□□□□ 0.18
CD48-201ENST00000368045 DESI2Q9BSY9 194 aa16.15■□□□□ 0.18
CD48-201ENST00000368045 KDM4FA0A1W2PPD8 638 aa16.15■□□□□ 0.18
CD48-201ENST00000368045 NMT2O60551 498 aa16.15■□□□□ 0.18
CD48-201ENST00000368045 RPN1P04843 607 aaKnown RBP16.15■□□□□ 0.18
CD48-201ENST00000368045 GYPCP04921 128 aa16.15■□□□□ 0.18
CD48-201ENST00000368045 MCM7P33993 719 aa16.15■□□□□ 0.18
CD48-201ENST00000368045 GRM4Q14833 912 aa16.15■□□□□ 0.18
CD48-201ENST00000368045 IL17AQ16552 155 aa16.15■□□□□ 0.18
CD48-201ENST00000368045 TBC1D9BQ66K14 1250 aa16.15■□□□□ 0.18
CD48-201ENST00000368045 CCDC148Q8NFR7 591 aa16.15■□□□□ 0.18
CD48-201ENST00000368045 NARFQ9UHQ1 456 aa16.15■□□□□ 0.18
CD48-201ENST00000368045 BAZ2AQ9UIF9 1905 aaKnown RBP16.15■□□□□ 0.18
CD48-201ENST00000368045 KIAA1551Q9HCM1 1747 aa16.15■□□□□ 0.18
CD48-201ENST00000368045 H7C1D1 291 aa16.14■□□□□ 0.17
CD48-201ENST00000368045 LAD1O00515 517 aa16.14■□□□□ 0.17
CD48-201ENST00000368045 N4BP3O15049 544 aa16.14■□□□□ 0.17
CD48-201ENST00000368045 CYP2D6P10635 497 aa16.14■□□□□ 0.17
CD48-201ENST00000368045 KLRK1P26718 216 aa16.14■□□□□ 0.17
CD48-201ENST00000368045 PRDX5P30044 214 aa16.14■□□□□ 0.17
CD48-201ENST00000368045 COPB1P53618 953 aaKnown RBP16.14■□□□□ 0.17
CD48-201ENST00000368045 KCNB1Q14721 858 aa16.14■□□□□ 0.17
CD48-201ENST00000368045 MTF1Q14872 753 aa16.14■□□□□ 0.17
CD48-201ENST00000368045 KARSQ15046 597 aaKnown RBP16.14■□□□□ 0.17
CD48-201ENST00000368045 C12orf60Q5U649 245 aa16.14■□□□□ 0.17
CD48-201ENST00000368045 DZIP1Q86YF9 867 aaKnown RBP16.14■□□□□ 0.17
CD48-201ENST00000368045 SMYD4Q8IYR2 804 aaPredicted RBP16.14■□□□□ 0.17
CD48-201ENST00000368045 NELFBQ8WX92 580 aa16.14■□□□□ 0.17
CD48-201ENST00000368045 SETDB2Q96T68 719 aa16.14■□□□□ 0.17
CD48-201ENST00000368045 MTRQ99707 1265 aa16.14■□□□□ 0.17
CD48-201ENST00000368045 TCP11L1Q9NUJ3 509 aa16.14■□□□□ 0.17
CD48-201ENST00000368045 MYO1AQ9UBC5 1043 aa16.14■□□□□ 0.17
CD48-201ENST00000368045 ZHX1Q9UKY1 873 aaPredicted RBP16.14■□□□□ 0.17
CD48-201ENST00000368045 POTEB2H3BUK9 544 aa16.13■□□□□ 0.17
CD48-201ENST00000368045 CASP14P31944 242 aa16.13■□□□□ 0.17
CD48-201ENST00000368045 STAT6P42226 847 aa16.13■□□□□ 0.17
CD48-201ENST00000368045 GSTO1P78417 241 aa16.13■□□□□ 0.17
CD48-201ENST00000368045 TCP11X2Q5H9J9 407 aa16.13■□□□□ 0.17
CD48-201ENST00000368045 WWC2Q6AWC2 1192 aa16.13■□□□□ 0.17
CD48-201ENST00000368045 CYP26C1Q6V0L0 522 aa16.13■□□□□ 0.17
CD48-201ENST00000368045 CEP112Q8N8E3 955 aa16.13■□□□□ 0.17
CD48-201ENST00000368045 PNMA1Q8ND90 353 aa16.13■□□□□ 0.17
CD48-201ENST00000368045 LZTS2Q9BRK4 669 aa16.13■□□□□ 0.17
CD48-201ENST00000368045 MAGEF1Q9HAY2 307 aa16.13■□□□□ 0.17
CD48-201ENST00000368045 MCM9Q9NXL9 1143 aa16.13■□□□□ 0.17
CD48-201ENST00000368045 MKRN1Q9UHC7 482 aaKnown RBP16.13■□□□□ 0.17
CD48-201ENST00000368045 KCNJ18B7U540 433 aa16.13■□□□□ 0.17
CD48-201ENST00000368045 M0R2N6 131 aa16.13■□□□□ 0.17
CD48-201ENST00000368045 KCNQ2O43526 872 aa16.13■□□□□ 0.17
CD48-201ENST00000368045 RPS6KA4O75676 772 aa16.13■□□□□ 0.17
CD48-201ENST00000368045 TFAP4Q01664 338 aa16.13■□□□□ 0.17
CD48-201ENST00000368045 KCNJ12Q14500 433 aa16.13■□□□□ 0.17
CD48-201ENST00000368045 NBPF5PQ86XG9 351 aaPredicted RBP16.13■□□□□ 0.17
CD48-201ENST00000368045 AMOTL1Q8IY63 956 aa16.13■□□□□ 0.17
CD48-201ENST00000368045 WDR66Q8TBY9 1149 aa16.13■□□□□ 0.17
CD48-201ENST00000368045 CPLX3Q8WVH0 158 aa16.13■□□□□ 0.17
CD48-201ENST00000368045 BLZF1Q9H2G9 400 aa16.13■□□□□ 0.17
CD48-201ENST00000368045 CUEDC2Q9H467 287 aa16.13■□□□□ 0.17
CD48-201ENST00000368045 DISC1Q9NRI5 854 aa16.13■□□□□ 0.17
CD48-201ENST00000368045 TFCP2L1Q9NZI6 479 aa16.13■□□□□ 0.17
CD48-201ENST00000368045 CDC23Q9UJX2 597 aa16.13■□□□□ 0.17
CD48-201ENST00000368045 IRS2Q9Y4H2 1338 aa16.13■□□□□ 0.17
CD48-201ENST00000368045 CCDC194A0A1B0GVG4 234 aa16.12■□□□□ 0.17
CD48-201ENST00000368045 PRPHP41219 470 aa16.12■□□□□ 0.17
CD48-201ENST00000368045 PLA2G4AP47712 749 aa16.12■□□□□ 0.17
CD48-201ENST00000368045 FXR1P51114 621 aaKnown RBP eCLIP16.12■□□□□ 0.17
CD48-201ENST00000368045 COL24A1Q17RW2 1714 aa16.12■□□□□ 0.17
CD48-201ENST00000368045 TEX35Q5T0J7 233 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms