RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 MYL5Q02045 173 aa4.14□□□□□ -1.75
SYNE1-207ENST00000367255 BFSP1Q12934 665 aa4.14□□□□□ -1.75
SYNE1-207ENST00000367255 CALCOCO2Q13137 446 aa4.14□□□□□ -1.75
SYNE1-207ENST00000367255 IQCA1Q86XH1 822 aa4.14□□□□□ -1.75
SYNE1-207ENST00000367255 IL17RAQ96F46 866 aa4.14□□□□□ -1.75
SYNE1-207ENST00000367255 RPSAP08865 295 aaKnown RBP4.14□□□□□ -1.75
SYNE1-207ENST00000367255 CCZ1BP86790 482 aa4.14□□□□□ -1.75
SYNE1-207ENST00000367255 CCZ1P86791 482 aaPredicted RBP4.14□□□□□ -1.75
SYNE1-207ENST00000367255 MAK16Q9BXY0 300 aaKnown RBP4.14□□□□□ -1.75
SYNE1-207ENST00000367255 FBXL16Q8N461 479 aa4.14□□□□□ -1.75
SYNE1-207ENST00000367255 EFHD2Q96C19 240 aaPredicted RBP4.14□□□□□ -1.75
SYNE1-207ENST00000367255 XAB2Q9HCS7 855 aaKnown RBP4.14□□□□□ -1.75
SYNE1-207ENST00000367255 ADGRL3Q9HAR2 1447 aa4.14□□□□□ -1.75
SYNE1-207ENST00000367255 NOA1Q8NC60 698 aaKnown RBP4.14□□□□□ -1.75
SYNE1-207ENST00000367255 PALMDQ9NP74 551 aa4.14□□□□□ -1.75
SYNE1-207ENST00000367255 CES2O00748 559 aa4.14□□□□□ -1.75
SYNE1-207ENST00000367255 KATNAL1Q9BW62 490 aa4.14□□□□□ -1.75
SYNE1-207ENST00000367255 UGGT2Q9NYU1 1516 aa4.14□□□□□ -1.75
SYNE1-207ENST00000367255 IL20Q9NYY1 176 aa4.14□□□□□ -1.75
SYNE1-207ENST00000367255 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.14□□□□□ -1.75
SYNE1-207ENST00000367255 SKIV2L2P42285 1042 aaKnown RBP4.14□□□□□ -1.75
SYNE1-207ENST00000367255 FAM9CQ8IZT9 166 aa4.14□□□□□ -1.75
SYNE1-207ENST00000367255 TEKT4Q8WW24 435 aa4.14□□□□□ -1.75
SYNE1-207ENST00000367255 OSBPL5Q9H0X9 879 aaPredicted RBP4.14□□□□□ -1.75
SYNE1-207ENST00000367255 TSPYL2Q9H2G4 693 aaPredicted RBP4.14□□□□□ -1.75
SYNE1-207ENST00000367255 SERPINC1P01008 464 aa4.14□□□□□ -1.75
SYNE1-207ENST00000367255 LUZP2Q86TE4 346 aa4.14□□□□□ -1.75
SYNE1-207ENST00000367255 HAUS1Q96CS2 278 aa4.14□□□□□ -1.75
SYNE1-207ENST00000367255 GRIN2BQ13224 1484 aa4.14□□□□□ -1.75
SYNE1-207ENST00000367255 UBTFL1P0CB47 393 aaPredicted RBP4.14□□□□□ -1.75
SYNE1-207ENST00000367255 PPP2R5CQ13362 524 aa4.14□□□□□ -1.75
SYNE1-207ENST00000367255 KCNH5Q8NCM2 988 aa4.14□□□□□ -1.75
SYNE1-207ENST00000367255 CCDC113Q9H0I3 377 aa4.14□□□□□ -1.75
SYNE1-207ENST00000367255 UBN1Q9NPG3 1134 aa4.14□□□□□ -1.75
SYNE1-207ENST00000367255 LRRD1A4D1F6 860 aa4.14□□□□□ -1.75
SYNE1-207ENST00000367255 PURAQ00577 322 aaKnown RBP4.14□□□□□ -1.75
SYNE1-207ENST00000367255 FLOT2Q14254 428 aa4.14□□□□□ -1.75
SYNE1-207ENST00000367255 PAWRQ96IZ0 340 aaKnown RBP4.14□□□□□ -1.75
SYNE1-207ENST00000367255 CCDC62Q6P9F0 684 aa4.14□□□□□ -1.75
SYNE1-207ENST00000367255 RHPN1Q8TCX5 695 aa4.14□□□□□ -1.75
SYNE1-207ENST00000367255 TBC1D2Q9BYX2 928 aa4.14□□□□□ -1.75
SYNE1-207ENST00000367255 RAPGEF1Q13905 1077 aa4.14□□□□□ -1.75
SYNE1-207ENST00000367255 MBD2Q9UBB5 411 aa4.14□□□□□ -1.75
SYNE1-207ENST00000367255 LOC102724159A0A0B4J2E5 919 aa4.13□□□□□ -1.75
SYNE1-207ENST00000367255 CCDC159P0C7I6 412 aa4.13□□□□□ -1.75
SYNE1-207ENST00000367255 GYS2P54840 703 aa4.13□□□□□ -1.75
SYNE1-207ENST00000367255 PWP2Q15269 919 aaKnown RBP4.13□□□□□ -1.75
SYNE1-207ENST00000367255 CYTH1Q15438 398 aa4.13□□□□□ -1.75
SYNE1-207ENST00000367255 CCDC89Q8N998 374 aa4.13□□□□□ -1.75
SYNE1-207ENST00000367255 AK8Q96MA6 479 aa4.13□□□□□ -1.75
SYNE1-207ENST00000367255 SERPINI1Q99574 410 aa4.13□□□□□ -1.75
SYNE1-207ENST00000367255 TCP11L1Q9NUJ3 509 aa4.13□□□□□ -1.75
SYNE1-207ENST00000367255 ABCC5O15440 1437 aa4.13□□□□□ -1.75
SYNE1-207ENST00000367255 DNAJB5O75953 348 aa4.13□□□□□ -1.75
SYNE1-207ENST00000367255 CPA1P15085 419 aa4.13□□□□□ -1.75
SYNE1-207ENST00000367255 SYT1P21579 422 aa4.13□□□□□ -1.75
SYNE1-207ENST00000367255 THOC5Q13769 683 aaKnown RBP4.13□□□□□ -1.75
SYNE1-207ENST00000367255 RASEFQ8IZ41 740 aa4.13□□□□□ -1.75
SYNE1-207ENST00000367255 TCEANC2Q96MN5 208 aa4.13□□□□□ -1.75
SYNE1-207ENST00000367255 NEDD4LQ96PU5 975 aa4.13□□□□□ -1.75
SYNE1-207ENST00000367255 ANAPC5Q9UJX4 755 aa4.13□□□□□ -1.75
SYNE1-207ENST00000367255 AP4S1Q9Y587 144 aa4.13□□□□□ -1.75
SYNE1-207ENST00000367255 ADGRA2Q96PE1 1338 aa4.13□□□□□ -1.75
SYNE1-207ENST00000367255 TOP2BQ02880 1626 aa4.13□□□□□ -1.75
SYNE1-207ENST00000367255 GAS2L3Q86XJ1 694 aa4.13□□□□□ -1.75
SYNE1-207ENST00000367255 HYPKQ9NX55 129 aa4.13□□□□□ -1.75
SYNE1-207ENST00000367255 AATKQ6ZMQ8 1374 aa4.13□□□□□ -1.75
SYNE1-207ENST00000367255 LARP1BQ659C4 914 aaKnown RBP4.13□□□□□ -1.75
SYNE1-207ENST00000367255 ATG3Q9NT62 314 aa4.13□□□□□ -1.75
SYNE1-207ENST00000367255 GMEB1Q9Y692 573 aa4.13□□□□□ -1.75
SYNE1-207ENST00000367255 CALB2P22676 271 aa4.13□□□□□ -1.75
SYNE1-207ENST00000367255 KRT6CP48668 564 aa4.13□□□□□ -1.75
SYNE1-207ENST00000367255 HK2P52789 917 aa4.13□□□□□ -1.75
SYNE1-207ENST00000367255 TTC25Q96NG3 672 aa4.13□□□□□ -1.75
SYNE1-207ENST00000367255 CPSF1Q10570 1443 aaKnown RBP4.13□□□□□ -1.75
SYNE1-207ENST00000367255 EPHB4P54760 987 aa4.13□□□□□ -1.75
SYNE1-207ENST00000367255 SNCBQ16143 134 aa4.13□□□□□ -1.75
SYNE1-207ENST00000367255 TMEM266Q2M3C6 531 aa4.13□□□□□ -1.75
SYNE1-207ENST00000367255 OLFML1Q6UWY5 402 aa4.13□□□□□ -1.75
SYNE1-207ENST00000367255 TKTP29401 623 aaKnown RBP4.13□□□□□ -1.75
SYNE1-207ENST00000367255 YWHAEP62258 255 aaKnown RBP4.13□□□□□ -1.75
SYNE1-207ENST00000367255 OLR1P78380 273 aa4.13□□□□□ -1.75
SYNE1-207ENST00000367255 SAAL1Q96ER3 474 aa4.13□□□□□ -1.75
SYNE1-207ENST00000367255 TIMMDC1Q9NPL8 285 aa4.13□□□□□ -1.75
SYNE1-207ENST00000367255 MARCH6O60337 910 aa4.13□□□□□ -1.75
SYNE1-207ENST00000367255 BNIPLQ7Z465 357 aa4.13□□□□□ -1.75
SYNE1-207ENST00000367255 ZNF710Q8N1W2 664 aa4.13□□□□□ -1.75
SYNE1-207ENST00000367255 TSPYL6Q8N831 410 aa4.13□□□□□ -1.75
SYNE1-207ENST00000367255 TSC22D3Q99576 134 aa4.13□□□□□ -1.75
SYNE1-207ENST00000367255 SYCE3A1L190 88 aa4.13□□□□□ -1.75
SYNE1-207ENST00000367255 AP1B1Q10567 949 aa4.13□□□□□ -1.75
SYNE1-207ENST00000367255 LRIG3Q6UXM1 1119 aa4.13□□□□□ -1.75
SYNE1-207ENST00000367255 DHX38Q92620 1227 aaKnown RBP4.13□□□□□ -1.75
SYNE1-207ENST00000367255 ARMC2Q8NEN0 867 aa4.13□□□□□ -1.75
SYNE1-207ENST00000367255 BEST2Q8NFU1 509 aa4.13□□□□□ -1.75
SYNE1-207ENST00000367255 BLOC1S5Q8TDH9 187 aa4.13□□□□□ -1.75
SYNE1-207ENST00000367255 CD209Q9NNX6 404 aa4.13□□□□□ -1.75
SYNE1-207ENST00000367255 CHCHD3Q9NX63 227 aaKnown RBP4.13□□□□□ -1.75
SYNE1-207ENST00000367255 STK38Q15208 465 aa4.13□□□□□ -1.75
SYNE1-207ENST00000367255 AASDHPPTQ9NRN7 309 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms