RNA–Protein interactions for RNA: ENST00000367063.6

CD55-203, Transcript of CD55 molecule (Cromer blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD55, Length 1,691 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-203ENST00000367063 CD2BP2O95400 341 aaKnown RBP23.64■■□□□ 1.38
CD55-203ENST00000367063 SNHG28P0DPA3 235 aa23.64■■□□□ 1.38
CD55-203ENST00000367063 BMP3P12645 472 aa23.64■■□□□ 1.38
CD55-203ENST00000367063 FAM83BQ5T0W9 1011 aa23.64■■□□□ 1.38
CD55-203ENST00000367063 PDIA3P30101 505 aaKnown RBP23.64■■□□□ 1.37
CD55-203ENST00000367063 NOGQ13253 232 aa23.64■■□□□ 1.37
CD55-203ENST00000367063 MOGSQ13724 837 aa23.64■■□□□ 1.37
CD55-203ENST00000367063 TREML2Q5T2D2 321 aa23.64■■□□□ 1.37
CD55-203ENST00000367063 KCTD1Q719H9 257 aa23.64■■□□□ 1.37
CD55-203ENST00000367063 CTCFLQ8NI51 663 aaPredicted RBP23.64■■□□□ 1.37
CD55-203ENST00000367063 BRI3BPQ8WY22 251 aa23.64■■□□□ 1.37
CD55-203ENST00000367063 ZNF274Q96GC6 653 aaPredicted RBP23.64■■□□□ 1.37
CD55-203ENST00000367063 RPAP3Q9H6T3 665 aaPredicted RBP23.64■■□□□ 1.37
CD55-203ENST00000367063 LIMCH1Q9UPQ0 1083 aa23.64■■□□□ 1.37
CD55-203ENST00000367063 PARP1P09874 1014 aaKnown RBP23.63■■□□□ 1.37
CD55-203ENST00000367063 GOLGA8HP0CJ92 632 aa23.63■■□□□ 1.37
CD55-203ENST00000367063 METAP2P50579 478 aaKnown RBP eCLIP23.63■■□□□ 1.37
CD55-203ENST00000367063 STK3Q13188 491 aa23.63■■□□□ 1.37
CD55-203ENST00000367063 GRM4Q14833 912 aa23.63■■□□□ 1.37
CD55-203ENST00000367063 FANCBQ8NB91 859 aa23.63■■□□□ 1.37
CD55-203ENST00000367063 TANGO6Q9C0B7 1094 aa23.63■■□□□ 1.37
CD55-203ENST00000367063 AGTPBP1Q9UPW5 1226 aa23.63■■□□□ 1.37
CD55-203ENST00000367063 WDR33Q9C0J8 1336 aaKnown RBP23.62■■□□□ 1.37
CD55-203ENST00000367063 GOLGA8AA7E2F4 631 aa23.62■■□□□ 1.37
CD55-203ENST00000367063 AOC2O75106 756 aa23.62■■□□□ 1.37
CD55-203ENST00000367063 MCM2P49736 904 aa23.62■■□□□ 1.37
CD55-203ENST00000367063 RCAN1P53805 252 aa23.62■■□□□ 1.37
CD55-203ENST00000367063 ZNF543Q08ER8 600 aa23.62■■□□□ 1.37
CD55-203ENST00000367063 MAP3K14Q99558 947 aa23.62■■□□□ 1.37
CD55-203ENST00000367063 GPCPD1Q9NPB8 672 aa23.62■■□□□ 1.37
CD55-203ENST00000367063 HPS5Q9UPZ3 1129 aa23.62■■□□□ 1.37
CD55-203ENST00000367063 KIF5BP33176 963 aa23.61■■□□□ 1.37
CD55-203ENST00000367063 VEGFBP49765 207 aa23.61■■□□□ 1.37
CD55-203ENST00000367063 KIF23Q02241 960 aaPredicted RBP23.61■■□□□ 1.37
CD55-203ENST00000367063 ASPRV1Q53RT3 343 aa23.61■■□□□ 1.37
CD55-203ENST00000367063 GPATCH4Q5T3I0 446 aaKnown RBP23.61■■□□□ 1.37
CD55-203ENST00000367063 ZIC5Q96T25 663 aa23.61■■□□□ 1.37
CD55-203ENST00000367063 MAD2L2Q9UI95 211 aa23.61■■□□□ 1.37
CD55-203ENST00000367063 TESPA1A2RU30 521 aaPredicted RBP23.6■■□□□ 1.37
CD55-203ENST00000367063 INHBEP58166 350 aa23.6■■□□□ 1.37
CD55-203ENST00000367063 CCT2P78371 535 aaKnown RBP23.6■■□□□ 1.37
CD55-203ENST00000367063 SREBF2Q12772 1141 aa23.6■■□□□ 1.37
CD55-203ENST00000367063 IKQ13123 557 aaPredicted RBP23.6■■□□□ 1.37
CD55-203ENST00000367063 ME3Q16798 604 aa23.6■■□□□ 1.37
CD55-203ENST00000367063 RTN1Q16799 776 aa23.6■■□□□ 1.37
CD55-203ENST00000367063 GPAT2Q6NUI2 795 aa23.6■■□□□ 1.37
CD55-203ENST00000367063 STAG2Q8N3U4 1231 aa23.6■■□□□ 1.37
CD55-203ENST00000367063 SLKQ9H2G2 1235 aaPredicted RBP23.6■■□□□ 1.37
CD55-203ENST00000367063 PALM3A6NDB9 673 aaPredicted RBP23.6■■□□□ 1.37
CD55-203ENST00000367063 USP17L15C9J2P7 530 aa23.6■■□□□ 1.37
CD55-203ENST00000367063 BTBD19C9JJ37 291 aa23.6■■□□□ 1.37
CD55-203ENST00000367063 USP17L13C9JLJ4 530 aa23.6■■□□□ 1.37
CD55-203ENST00000367063 TMEM232C9JQI7 657 aa23.6■■□□□ 1.37
CD55-203ENST00000367063 USP17L11C9JVI0 530 aa23.6■■□□□ 1.37
CD55-203ENST00000367063 USP17L18D6R9N7 530 aa23.6■■□□□ 1.37
CD55-203ENST00000367063 USP17L22D6RA61 530 aa23.6■■□□□ 1.37
CD55-203ENST00000367063 USP17L17D6RBQ6 530 aa23.6■■□□□ 1.37
CD55-203ENST00000367063 USP17L19D6RCP7 530 aa23.6■■□□□ 1.37
CD55-203ENST00000367063 USP17L20D6RJB6 530 aa23.6■■□□□ 1.37
CD55-203ENST00000367063 LARGE1O95461 756 aa23.6■■□□□ 1.37
CD55-203ENST00000367063 USP17L24Q0WX57 530 aa23.6■■□□□ 1.37
CD55-203ENST00000367063 PTPN18Q99952 460 aa23.6■■□□□ 1.37
CD55-203ENST00000367063 PABPC4Q13310 644 aaKnown RBP eCLIP23.59■■□□□ 1.374e-9■■■■□ 23.2
CD55-203ENST00000367063 TTBK2Q6IQ55 1244 aa23.59■■□□□ 1.37
CD55-203ENST00000367063 ZSCAN31Q96LW9 406 aaPredicted RBP23.59■■□□□ 1.37
CD55-203ENST00000367063 RBM28Q9NW13 759 aaKnown RBP23.59■■□□□ 1.37
CD55-203ENST00000367063 KLRF2D3W0D1 207 aa23.58■■□□□ 1.37
CD55-203ENST00000367063 FLOT1O75955 427 aa23.58■■□□□ 1.37
CD55-203ENST00000367063 HOXA7P31268 230 aaPredicted RBP23.58■■□□□ 1.37
CD55-203ENST00000367063 STAT2P52630 851 aa23.58■■□□□ 1.37
CD55-203ENST00000367063 PPP2R5BQ15173 497 aa23.58■■□□□ 1.37
CD55-203ENST00000367063 SAMD1Q6SPF0 538 aaPredicted RBP23.58■■□□□ 1.37
CD55-203ENST00000367063 CATSPERGQ6ZRH7 1159 aa23.58■■□□□ 1.37
CD55-203ENST00000367063 ANKRD23Q86SG2 305 aa23.58■■□□□ 1.37
CD55-203ENST00000367063 NCOA5Q9HCD5 579 aaKnown RBP23.58■■□□□ 1.37
CD55-203ENST00000367063 FEM1BQ9UK73 627 aa23.58■■□□□ 1.37
CD55-203ENST00000367063 NID2Q14112 1375 aa23.57■■□□□ 1.36
CD55-203ENST00000367063 CCDC196A0A1B0GTZ2 297 aa23.57■■□□□ 1.36
CD55-203ENST00000367063 PFKFB2O60825 505 aa23.57■■□□□ 1.36
CD55-203ENST00000367063 CDC27P30260 824 aa23.57■■□□□ 1.36
CD55-203ENST00000367063 SLC16A2P36021 539 aa23.57■■□□□ 1.36
CD55-203ENST00000367063 SCRN1Q12765 414 aa23.57■■□□□ 1.36
CD55-203ENST00000367063 FAM43AQ8N2R8 423 aa23.57■■□□□ 1.36
CD55-203ENST00000367063 NECAB1Q8N987 351 aa23.57■■□□□ 1.36
CD55-203ENST00000367063 UBA5Q9GZZ9 404 aa23.57■■□□□ 1.36
CD55-203ENST00000367063 FBXO28Q9NVF7 368 aa23.57■■□□□ 1.36
CD55-203ENST00000367063 PDHXO00330 501 aa23.57■■□□□ 1.36
CD55-203ENST00000367063 ADD1P35611 737 aaKnown RBP23.57■■□□□ 1.36
CD55-203ENST00000367063 GNAQP50148 359 aa23.57■■□□□ 1.36
CD55-203ENST00000367063 IRX3P78415 501 aaPredicted RBP23.57■■□□□ 1.36
CD55-203ENST00000367063 IFNL1Q8IU54 200 aa23.57■■□□□ 1.36
CD55-203ENST00000367063 CHURC1Q8WUH1 139 aa23.57■■□□□ 1.36
CD55-203ENST00000367063 SNX21Q969T3 373 aa23.57■■□□□ 1.36
CD55-203ENST00000367063 CPVLQ9H3G5 476 aa23.57■■□□□ 1.36
CD55-203ENST00000367063 SH2B1Q9NRF2 756 aaPredicted RBP23.57■■□□□ 1.36
CD55-203ENST00000367063 FAM217BQ9NTX9 383 aaPredicted RBP23.57■■□□□ 1.36
CD55-203ENST00000367063 IGF2BP3O00425 579 aaKnown RBP eCLIP23.56■■□□□ 1.36
CD55-203ENST00000367063 PLEKHA8P1O95397 391 aa23.56■■□□□ 1.36
CD55-203ENST00000367063 OSBPP22059 807 aa23.56■■□□□ 1.36
CD55-203ENST00000367063 MAP2K2P36507 400 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms