RNA–Protein interactions for RNA: ENST00000367042.5

CD46-208, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-208ENST00000367042 TTC19Q6DKK2 380 aaPredicted RBP9.21□□□□□ -0.94
CD46-208ENST00000367042 BRINP3Q76B58 766 aa9.21□□□□□ -0.94
CD46-208ENST00000367042 RASGRP4Q8TDF6 673 aa9.21□□□□□ -0.94
CD46-208ENST00000367042 RUFY1Q96T51 708 aa9.21□□□□□ -0.94
CD46-208ENST00000367042 ZBTB1Q9Y2K1 713 aa9.21□□□□□ -0.94
CD46-208ENST00000367042 SAR1BQ9Y6B6 198 aa9.21□□□□□ -0.94
CD46-208ENST00000367042 SOS2Q07890 1332 aaPredicted RBP9.21□□□□□ -0.94
CD46-208ENST00000367042 PPP1R3GB7ZBB8 358 aa9.2□□□□□ -0.94
CD46-208ENST00000367042 NDUFA10O95299 355 aa9.2□□□□□ -0.94
CD46-208ENST00000367042 IDEP14735 1019 aa9.2□□□□□ -0.94
CD46-208ENST00000367042 MTIF2P46199 727 aaKnown RBP9.2□□□□□ -0.94
CD46-208ENST00000367042 CYP27A1Q02318 531 aa9.2□□□□□ -0.94
CD46-208ENST00000367042 STIM1Q13586 685 aa9.2□□□□□ -0.94
CD46-208ENST00000367042 CCDC96Q2M329 555 aa9.2□□□□□ -0.94
CD46-208ENST00000367042 NT5DC1Q5TFE4 455 aa9.2□□□□□ -0.94
CD46-208ENST00000367042 FERMT2Q96AC1 680 aa9.2□□□□□ -0.94
CD46-208ENST00000367042 ABCA3Q99758 1704 aa9.2□□□□□ -0.94
CD46-208ENST00000367042 TTC26A0AVF1 554 aa9.2□□□□□ -0.94
CD46-208ENST00000367042 MAP2K7O14733 419 aa9.2□□□□□ -0.94
CD46-208ENST00000367042 NMT2O60551 498 aa9.2□□□□□ -0.94
CD46-208ENST00000367042 ATP1A1P05023 1023 aaKnown RBP9.2□□□□□ -0.94
CD46-208ENST00000367042 GNAT2P19087 354 aa9.2□□□□□ -0.94
CD46-208ENST00000367042 UBA7P41226 1012 aa9.2□□□□□ -0.94
CD46-208ENST00000367042 DYNLL1P63167 89 aaKnown RBP9.2□□□□□ -0.94
CD46-208ENST00000367042 CCDC178Q5BJE1 867 aa9.2□□□□□ -0.94
CD46-208ENST00000367042 TCP11X2Q5H9J9 407 aa9.2□□□□□ -0.94
CD46-208ENST00000367042 FAM71BQ8TC56 605 aa9.2□□□□□ -0.94
CD46-208ENST00000367042 CCDC51Q96ER9 411 aa9.2□□□□□ -0.94
CD46-208ENST00000367042 TCRBV5S4A2TA0A5A2 114 aa9.2□□□□□ -0.94
CD46-208ENST00000367042 B4DLN1 442 aa9.2□□□□□ -0.94
CD46-208ENST00000367042 ZNF185O15231 689 aa9.2□□□□□ -0.94
CD46-208ENST00000367042 KRT86O43790 486 aa9.2□□□□□ -0.94
CD46-208ENST00000367042 CCDC181Q5TID7 509 aa9.2□□□□□ -0.94
CD46-208ENST00000367042 OR8K1Q8NGG5 319 aa9.2□□□□□ -0.94
CD46-208ENST00000367042 STAG1Q8WVM7 1258 aa9.2□□□□□ -0.94
CD46-208ENST00000367042 JAKMIP2Q96AA8 810 aa9.2□□□□□ -0.94
CD46-208ENST00000367042 ZSCAN10Q96SZ4 725 aaPredicted RBP9.2□□□□□ -0.94
CD46-208ENST00000367042 MMS19Q96T76 1030 aa9.2□□□□□ -0.94
CD46-208ENST00000367042 RNF26Q9BY78 433 aaPredicted RBP9.2□□□□□ -0.94
CD46-208ENST00000367042 ARFGEF2Q9Y6D5 1785 aa9.19□□□□□ -0.94
CD46-208ENST00000367042 RPN1P04843 607 aaKnown RBP9.19□□□□□ -0.94
CD46-208ENST00000367042 PARP1P09874 1014 aaKnown RBP9.19□□□□□ -0.94
CD46-208ENST00000367042 PRCPP42785 496 aa9.19□□□□□ -0.94
CD46-208ENST00000367042 GYG1P46976 350 aa9.19□□□□□ -0.94
CD46-208ENST00000367042 MICALL1Q8N3F8 863 aa9.19□□□□□ -0.94
CD46-208ENST00000367042 ENAHQ8N8S7 591 aaPredicted RBP9.19□□□□□ -0.94
CD46-208ENST00000367042 RTL9Q8NET4 1388 aa9.19□□□□□ -0.94
CD46-208ENST00000367042 PIGBQ92521 554 aa9.19□□□□□ -0.94
CD46-208ENST00000367042 GPKOWQ92917 476 aaPredicted RBP eCLIP9.19□□□□□ -0.947e-22■□□□□ 10.2
CD46-208ENST00000367042 PLEKHG2Q9H7P9 1386 aa9.19□□□□□ -0.94
CD46-208ENST00000367042 ZNF335Q9H4Z2 1342 aaPredicted RBP9.19□□□□□ -0.94
CD46-208ENST00000367042 CCDC194A0A1B0GVG4 234 aa9.19□□□□□ -0.94
CD46-208ENST00000367042 TSPY2A6NKD2 308 aa9.19□□□□□ -0.94
CD46-208ENST00000367042 PP2D1A8MPX8 630 aa9.19□□□□□ -0.94
CD46-208ENST00000367042 BMP15O95972 392 aa9.19□□□□□ -0.94
CD46-208ENST00000367042 C2orf54Q08AI8 447 aa9.19□□□□□ -0.94
CD46-208ENST00000367042 ENOX2Q16206 610 aaKnown RBP9.19□□□□□ -0.94
CD46-208ENST00000367042 TTC31Q49AM3 519 aaPredicted RBP9.19□□□□□ -0.94
CD46-208ENST00000367042 RMND1Q9NWS8 449 aa9.19□□□□□ -0.94
CD46-208ENST00000367042 RIC1Q4ADV7 1423 aa9.18□□□□□ -0.94
CD46-208ENST00000367042 ABCC12Q96J65 1359 aa9.18□□□□□ -0.94
CD46-208ENST00000367042 XDHP47989 1333 aa9.18□□□□□ -0.94
CD46-208ENST00000367042 ARID4AP29374 1257 aaPredicted RBP9.18□□□□□ -0.94
CD46-208ENST00000367042 TBC1D8BQ0IIM8 1120 aa9.18□□□□□ -0.94
CD46-208ENST00000367042 TUBB2AQ13885 445 aa9.18□□□□□ -0.94
CD46-208ENST00000367042 SPA17Q15506 151 aa9.18□□□□□ -0.94
CD46-208ENST00000367042 CDKAL1Q5VV42 579 aa9.18□□□□□ -0.94
CD46-208ENST00000367042 MSANTD4Q8NCY6 345 aa9.18□□□□□ -0.94
CD46-208ENST00000367042 HNRNPLLQ8WVV9 542 aaKnown RBP9.18□□□□□ -0.94
CD46-208ENST00000367042 TUBB2BQ9BVA1 445 aa9.18□□□□□ -0.94
CD46-208ENST00000367042 UBXN6Q9BZV1 441 aa9.18□□□□□ -0.94
CD46-208ENST00000367042 MROH5Q6ZUA9 1318 aa9.18□□□□□ -0.94
CD46-208ENST00000367042 USP17L12C9JPN9 530 aa9.18□□□□□ -0.94
CD46-208ENST00000367042 USP17L21D6R901 530 aa9.18□□□□□ -0.94
CD46-208ENST00000367042 PSMA7O14818 248 aa9.18□□□□□ -0.94
CD46-208ENST00000367042 CXCR5P32302 372 aa9.18□□□□□ -0.94
CD46-208ENST00000367042 CYLC1P35663 651 aaPredicted RBP9.18□□□□□ -0.94
CD46-208ENST00000367042 APTXQ7Z2E3 356 aaKnown RBP9.18□□□□□ -0.94
CD46-208ENST00000367042 CSGALNACT2Q8N6G5 542 aa9.18□□□□□ -0.94
CD46-208ENST00000367042 EIF3CLB5ME19 914 aaKnown RBP9.18□□□□□ -0.94
CD46-208ENST00000367042 GGCXP38435 758 aa9.18□□□□□ -0.94
CD46-208ENST00000367042 KRT83P78385 493 aa9.18□□□□□ -0.94
CD46-208ENST00000367042 PDE4CQ08493 712 aa9.18□□□□□ -0.94
CD46-208ENST00000367042 KIF5AQ12840 1032 aa9.18□□□□□ -0.94
CD46-208ENST00000367042 TRIM14Q14142 442 aa9.18□□□□□ -0.94
CD46-208ENST00000367042 ALX1Q15699 326 aa9.18□□□□□ -0.94
CD46-208ENST00000367042 BICDL1Q6ZP65 573 aa9.18□□□□□ -0.94
CD46-208ENST00000367042 SND1Q7KZF4 910 aaKnown RBP eCLIP9.18□□□□□ -0.949e-12■■■■□ 20.8
CD46-208ENST00000367042 ANKRD13CQ8N6S4 541 aa9.18□□□□□ -0.94
CD46-208ENST00000367042 CCDC42Q96M95 316 aa9.18□□□□□ -0.94
CD46-208ENST00000367042 EIF3CQ99613 913 aaKnown RBP9.18□□□□□ -0.94
CD46-208ENST00000367042 TANGO6Q9C0B7 1094 aa9.18□□□□□ -0.94
CD46-208ENST00000367042 HAUS4Q9H6D7 363 aa9.18□□□□□ -0.94
CD46-208ENST00000367042 POLD4Q9HCU8 107 aa9.18□□□□□ -0.94
CD46-208ENST00000367042 RWDD2AQ9UIY3 292 aa9.18□□□□□ -0.94
CD46-208ENST00000367042 RAB21Q9UL25 225 aa9.18□□□□□ -0.94
CD46-208ENST00000367042 DUSP10Q9Y6W6 482 aa9.18□□□□□ -0.94
CD46-208ENST00000367042 WDR17Q8IZU2 1322 aa9.17□□□□□ -0.94
CD46-208ENST00000367042 GLI3P10071 1580 aa9.17□□□□□ -0.94
CD46-208ENST00000367042 GOLGA6CA6NDK9 693 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms