RNA–Protein interactions for RNA: ENST00000366814.3

H3F3A-202, Transcript of H3 histone family member 3A, humanhuman

TSL 2 BASIC

Gene H3F3A, Length 1,863 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-202ENST00000366814 FKBP1AP62942 108 aaKnown RBP12.53□□□□□ -0.4
H3F3A-202ENST00000366814 DLGAP5Q15398 846 aa12.53□□□□□ -0.4
H3F3A-202ENST00000366814 CKAP2LQ8IYA6 745 aa12.53□□□□□ -0.4
H3F3A-202ENST00000366814 FAM200AQ8TCP9 573 aa12.53□□□□□ -0.4
H3F3A-202ENST00000366814 TGFBRAP1Q8WUH2 860 aa12.53□□□□□ -0.4
H3F3A-202ENST00000366814 FOXP1Q9H334 677 aaPredicted RBP12.53□□□□□ -0.4
H3F3A-202ENST00000366814 BRMS1Q9HCU9 246 aa12.53□□□□□ -0.4
H3F3A-202ENST00000366814 GPR75-ASB3A0A0A6YYF3 556 aa12.53□□□□□ -0.4
H3F3A-202ENST00000366814 WNT10BO00744 389 aa12.53□□□□□ -0.4
H3F3A-202ENST00000366814 PPP6R2O75170 966 aa12.53□□□□□ -0.4
H3F3A-202ENST00000366814 SLC39A14Q15043 492 aa12.53□□□□□ -0.4
H3F3A-202ENST00000366814 NBPF11Q86T75 865 aa12.53□□□□□ -0.4
H3F3A-202ENST00000366814 NOSTRINQ8IVI9 506 aa12.53□□□□□ -0.4
H3F3A-202ENST00000366814 TEX11Q8IYF3 940 aa12.53□□□□□ -0.4
H3F3A-202ENST00000366814 ZNF444Q8N0Y2 327 aaPredicted RBP12.53□□□□□ -0.4
H3F3A-202ENST00000366814 C2orf69Q8N8R5 385 aa12.53□□□□□ -0.4
H3F3A-202ENST00000366814 FAM163AQ96GL9 167 aaPredicted RBP12.53□□□□□ -0.4
H3F3A-202ENST00000366814 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.53□□□□□ -0.4
H3F3A-202ENST00000366814 CCDC39Q9UFE4 941 aa12.53□□□□□ -0.4
H3F3A-202ENST00000366814 SCAF8Q9UPN6 1271 aaKnown RBP12.53□□□□□ -0.4
H3F3A-202ENST00000366814 ESPNB1AK53 854 aa12.52□□□□□ -0.41
H3F3A-202ENST00000366814 PRPF3O43395 683 aaKnown RBP12.52□□□□□ -0.41
H3F3A-202ENST00000366814 CYP2D6P10635 497 aa12.52□□□□□ -0.41
H3F3A-202ENST00000366814 ECE1P42892 770 aa12.52□□□□□ -0.41
H3F3A-202ENST00000366814 RBM5P52756 815 aaKnown RBP eCLIP12.52□□□□□ -0.41
H3F3A-202ENST00000366814 ZRSR1Q15695 479 aaKnown RBP12.52□□□□□ -0.41
H3F3A-202ENST00000366814 SAPCD2Q86UD0 394 aa12.52□□□□□ -0.41
H3F3A-202ENST00000366814 DIS3L2Q8IYB7 885 aaKnown RBP12.52□□□□□ -0.41
H3F3A-202ENST00000366814 CCDC82Q8N4S0 544 aa12.52□□□□□ -0.41
H3F3A-202ENST00000366814 KAT14Q9H8E8 782 aa12.52□□□□□ -0.41
H3F3A-202ENST00000366814 PITPNM2Q9BZ72 1349 aa12.52□□□□□ -0.41
H3F3A-202ENST00000366814 SMIM22K7EJ46 135 aa12.51□□□□□ -0.41
H3F3A-202ENST00000366814 PTMAP06454 111 aaKnown RBP12.51□□□□□ -0.41
H3F3A-202ENST00000366814 TSPY3P0CV98 308 aa12.51□□□□□ -0.41
H3F3A-202ENST00000366814 TSPY8P0CW00 308 aa12.51□□□□□ -0.41
H3F3A-202ENST00000366814 MSNP26038 577 aaKnown RBP12.51□□□□□ -0.41
H3F3A-202ENST00000366814 TFAP4Q01664 338 aa12.51□□□□□ -0.41
H3F3A-202ENST00000366814 TROAPQ12815 778 aa12.51□□□□□ -0.41
H3F3A-202ENST00000366814 RILPL1Q5EBL4 403 aa12.51□□□□□ -0.41
H3F3A-202ENST00000366814 FAM47AQ5JRC9 791 aa12.51□□□□□ -0.41
H3F3A-202ENST00000366814 CYP4F22Q6NT55 531 aa12.51□□□□□ -0.41
H3F3A-202ENST00000366814 CHRDL2Q6WN34 429 aa12.51□□□□□ -0.41
H3F3A-202ENST00000366814 DGKHQ86XP1 1220 aa12.51□□□□□ -0.41
H3F3A-202ENST00000366814 CDCA5Q96FF9 252 aa12.51□□□□□ -0.41
H3F3A-202ENST00000366814 CAPNS2Q96L46 248 aa12.51□□□□□ -0.41
H3F3A-202ENST00000366814 GBA2Q9HCG7 927 aaPredicted RBP12.51□□□□□ -0.41
H3F3A-202ENST00000366814 CEP131Q9UPN4 1083 aa12.51□□□□□ -0.41
H3F3A-202ENST00000366814 HSPA1AP0DMV8 641 aaKnown RBP12.51□□□□□ -0.41
H3F3A-202ENST00000366814 HSPA1BP0DMV9 641 aaKnown RBP12.51□□□□□ -0.41
H3F3A-202ENST00000366814 HUNKP57058 714 aa12.51□□□□□ -0.41
H3F3A-202ENST00000366814 CFAP100Q494V2 611 aa12.51□□□□□ -0.41
H3F3A-202ENST00000366814 TMTC3Q6ZXV5 915 aa12.51□□□□□ -0.41
H3F3A-202ENST00000366814 MAPKAPK5Q8IW41 473 aa12.51□□□□□ -0.41
H3F3A-202ENST00000366814 PIP4P2Q8N4L2 257 aa12.51□□□□□ -0.41
H3F3A-202ENST00000366814 MAP3K14Q99558 947 aa12.51□□□□□ -0.41
H3F3A-202ENST00000366814 SDF4Q9BRK5 362 aa12.51□□□□□ -0.41
H3F3A-202ENST00000366814 GOLPH3LQ9H4A5 285 aa12.51□□□□□ -0.41
H3F3A-202ENST00000366814 PCDHB8Q9UN66 801 aa12.51□□□□□ -0.41
H3F3A-202ENST00000366814 PCDHB13Q9Y5F0 798 aa12.51□□□□□ -0.41
H3F3A-202ENST00000366814 MRVI1Q9Y6F6 885 aa12.51□□□□□ -0.41
H3F3A-202ENST00000366814 GAKO14976 1311 aa12.5□□□□□ -0.41
H3F3A-202ENST00000366814 CDK5RAP2Q96SN8 1893 aa12.5□□□□□ -0.41
H3F3A-202ENST00000366814 MYO1BO43795 1136 aa12.5□□□□□ -0.41
H3F3A-202ENST00000366814 CMA1P23946 247 aa12.5□□□□□ -0.41
H3F3A-202ENST00000366814 GUCY1A2P33402 732 aa12.5□□□□□ -0.41
H3F3A-202ENST00000366814 GNAQP50148 359 aa12.5□□□□□ -0.41
H3F3A-202ENST00000366814 SNW1Q13573 536 aaKnown RBP12.5□□□□□ -0.41
H3F3A-202ENST00000366814 GRIK5Q16478 980 aa12.5□□□□□ -0.41
H3F3A-202ENST00000366814 STX1AQ16623 288 aa12.5□□□□□ -0.41
H3F3A-202ENST00000366814 ANO6Q4KMQ2 910 aa12.5□□□□□ -0.41
H3F3A-202ENST00000366814 CMTR1Q8N1G2 835 aaKnown RBP12.5□□□□□ -0.41
H3F3A-202ENST00000366814 ENGASEQ8NFI3 743 aa12.5□□□□□ -0.41
H3F3A-202ENST00000366814 TCP11L1Q9NUJ3 509 aa12.5□□□□□ -0.41
H3F3A-202ENST00000366814 USP25Q9UHP3 1055 aa12.5□□□□□ -0.41
H3F3A-202ENST00000366814 TTF2Q9UNY4 1162 aaKnown RBP12.5□□□□□ -0.41
H3F3A-202ENST00000366814 A0A1B0GVL5 298 aa12.49□□□□□ -0.41
H3F3A-202ENST00000366814 KRT2P35908 639 aa12.49□□□□□ -0.41
H3F3A-202ENST00000366814 SLC4A8Q2Y0W8 1093 aa12.49□□□□□ -0.41
H3F3A-202ENST00000366814 PRAMEF18Q5VWM3 479 aa12.49□□□□□ -0.41
H3F3A-202ENST00000366814 ZSCAN30Q86W11 494 aa12.49□□□□□ -0.41
H3F3A-202ENST00000366814 APOBEC3FQ8IUX4 373 aaKnown RBP12.49□□□□□ -0.41
H3F3A-202ENST00000366814 FMR1NBQ8N0W7 255 aaPredicted RBP12.49□□□□□ -0.41
H3F3A-202ENST00000366814 MTMR14Q8NCE2 650 aa12.49□□□□□ -0.41
H3F3A-202ENST00000366814 ZBED3Q96IU2 234 aaPredicted RBP12.49□□□□□ -0.41
H3F3A-202ENST00000366814 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.49□□□□□ -0.41
H3F3A-202ENST00000366814 KCNJ14Q9UNX9 436 aa12.49□□□□□ -0.41
H3F3A-202ENST00000366814 BTBD18B2RXH4 712 aa12.48□□□□□ -0.41
H3F3A-202ENST00000366814 CUTAO60888 179 aa12.48□□□□□ -0.41
H3F3A-202ENST00000366814 FLT1P17948 1338 aa12.48□□□□□ -0.41
H3F3A-202ENST00000366814 ANKS1AQ92625 1134 aa12.48□□□□□ -0.41
H3F3A-202ENST00000366814 HHIPL1Q96JK4 782 aa12.48□□□□□ -0.41
H3F3A-202ENST00000366814 PRMT6Q96LA8 375 aaPredicted RBP12.48□□□□□ -0.41
H3F3A-202ENST00000366814 NAT10Q9H0A0 1025 aaKnown RBP12.48□□□□□ -0.41
H3F3A-202ENST00000366814 ANO10Q9NW15 660 aa12.48□□□□□ -0.41
H3F3A-202ENST00000366814 SAP30BPQ9UHR5 308 aaKnown RBP12.48□□□□□ -0.41
H3F3A-202ENST00000366814 NOL7Q9UMY1 257 aaKnown RBP12.48□□□□□ -0.41
H3F3A-202ENST00000366814 PCDHAC2Q9Y5I4 1007 aa12.48□□□□□ -0.41
H3F3A-202ENST00000366814 V9GY48 417 aaPredicted RBP12.48□□□□□ -0.41
H3F3A-202ENST00000366814 MYH1P12882 1939 aa12.48□□□□□ -0.41
H3F3A-202ENST00000366814 CNTNAP5Q8WYK1 1306 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms