RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 PDE11AQ9HCR9 933 aa12.01□□□□□ -0.49
SMC3-201ENST00000361804 HOOK1Q9UJC3 728 aaKnown RBP12.01□□□□□ -0.49
SMC3-201ENST00000361804 CYP2D6P10635 497 aa12.01□□□□□ -0.49
SMC3-201ENST00000361804 ALX1Q15699 326 aa12.01□□□□□ -0.49
SMC3-201ENST00000361804 DDB1Q16531 1140 aa12.01□□□□□ -0.49
SMC3-201ENST00000361804 HDAC6Q9UBN7 1215 aa12.01□□□□□ -0.49
SMC3-201ENST00000361804 CENPFP49454 3210 aa12□□□□□ -0.49
SMC3-201ENST00000361804 AKAP17AQ02040 695 aaKnown RBP12□□□□□ -0.49
SMC3-201ENST00000361804 SEC23AQ15436 765 aa12□□□□□ -0.49
SMC3-201ENST00000361804 GPR161Q8N6U8 529 aaKnown RBP12□□□□□ -0.49
SMC3-201ENST00000361804 NOA1Q8NC60 698 aaKnown RBP12□□□□□ -0.49
SMC3-201ENST00000361804 RIOK1Q9BRS2 568 aaKnown RBP12□□□□□ -0.49
SMC3-201ENST00000361804 CNNM2Q9H8M5 875 aa12□□□□□ -0.49
SMC3-201ENST00000361804 CHRNDQ07001 517 aa12□□□□□ -0.49
SMC3-201ENST00000361804 KRT31Q15323 416 aa12□□□□□ -0.49
SMC3-201ENST00000361804 NPY5RQ15761 445 aa12□□□□□ -0.49
SMC3-201ENST00000361804 RRAGBQ5VZM2 374 aa12□□□□□ -0.49
SMC3-201ENST00000361804 FCHSD1Q86WN1 690 aa12□□□□□ -0.49
SMC3-201ENST00000361804 FNBP4Q8N3X1 1017 aaPredicted RBP12□□□□□ -0.49
SMC3-201ENST00000361804 SPATA20Q8TB22 786 aa12□□□□□ -0.49
SMC3-201ENST00000361804 WASF1Q92558 559 aa12□□□□□ -0.49
SMC3-201ENST00000361804 GOLGA1Q92805 767 aa12□□□□□ -0.49
SMC3-201ENST00000361804 CELF1Q92879 486 aaKnown RBP12□□□□□ -0.49
SMC3-201ENST00000361804 NACAP1Q9BZK3 213 aa12□□□□□ -0.49
SMC3-201ENST00000361804 LRRC4BQ9NT99 713 aa12□□□□□ -0.49
SMC3-201ENST00000361804 NKRFO15226 690 aaKnown RBP eCLIP12□□□□□ -0.49
SMC3-201ENST00000361804 MFAP3LO75121 409 aa12□□□□□ -0.49
SMC3-201ENST00000361804 SKIDA1Q1XH10 827 aa12□□□□□ -0.49
SMC3-201ENST00000361804 SPATA1Q5VX52 437 aa12□□□□□ -0.49
SMC3-201ENST00000361804 RASGRP2Q7LDG7 609 aa12□□□□□ -0.49
SMC3-201ENST00000361804 RGS22Q8NE09 1264 aa12□□□□□ -0.49
SMC3-201ENST00000361804 SRRTQ9BXP5 876 aaKnown RBP12□□□□□ -0.49
SMC3-201ENST00000361804 GREB1LQ9C091 1923 aaPredicted RBP11.99□□□□□ -0.49
SMC3-201ENST00000361804 SRGAP2O75044 1071 aa11.99□□□□□ -0.49
SMC3-201ENST00000361804 LMAN1P49257 510 aa11.99□□□□□ -0.49
SMC3-201ENST00000361804 FUT2Q10981 343 aa11.99□□□□□ -0.49
SMC3-201ENST00000361804 GPKOWQ92917 476 aaPredicted RBP eCLIP11.99□□□□□ -0.499e-7■■■□□ 17.9
SMC3-201ENST00000361804 TMEM51Q9NW97 253 aa11.99□□□□□ -0.49
SMC3-201ENST00000361804 LCMT1Q9UIC8 334 aa11.99□□□□□ -0.49
SMC3-201ENST00000361804 MYH1P12882 1939 aa11.99□□□□□ -0.49
SMC3-201ENST00000361804 N4BP3O15049 544 aa11.99□□□□□ -0.49
SMC3-201ENST00000361804 ZMYND10O75800 440 aa11.99□□□□□ -0.49
SMC3-201ENST00000361804 KRT2P35908 639 aa11.99□□□□□ -0.49
SMC3-201ENST00000361804 GRIK5Q16478 980 aa11.99□□□□□ -0.49
SMC3-201ENST00000361804 IFIT1BQ5T764 474 aaKnown RBP11.99□□□□□ -0.49
SMC3-201ENST00000361804 ABCB6Q9NP58 842 aa11.99□□□□□ -0.49
SMC3-201ENST00000361804 PODXL2Q9NZ53 605 aa11.99□□□□□ -0.49
SMC3-201ENST00000361804 SRP68Q9UHB9 627 aaKnown RBP11.99□□□□□ -0.49
SMC3-201ENST00000361804 TXLNAP40222 546 aa11.99□□□□□ -0.49
SMC3-201ENST00000361804 VSNL1P62760 191 aa11.99□□□□□ -0.49
SMC3-201ENST00000361804 SRBD1Q8N5C6 995 aaKnown RBP11.99□□□□□ -0.49
SMC3-201ENST00000361804 NUP88Q99567 741 aaPredicted RBP11.99□□□□□ -0.49
SMC3-201ENST00000361804 PLEKHA4Q9H4M7 779 aa11.99□□□□□ -0.49
SMC3-201ENST00000361804 CCDC66A2RUB6 948 aa11.98□□□□□ -0.49
SMC3-201ENST00000361804 ERCC3P19447 782 aa11.98□□□□□ -0.49
SMC3-201ENST00000361804 PBX1P40424 430 aa11.98□□□□□ -0.49
SMC3-201ENST00000361804 PMS1P54277 932 aaKnown RBP11.98□□□□□ -0.49
SMC3-201ENST00000361804 FAM98CQ17RN3 349 aaKnown RBP11.98□□□□□ -0.49
SMC3-201ENST00000361804 CDKAL1Q5VV42 579 aa11.98□□□□□ -0.49
SMC3-201ENST00000361804 PHF20Q9BVI0 1012 aa11.98□□□□□ -0.49
SMC3-201ENST00000361804 UBXN6Q9BZV1 441 aa11.98□□□□□ -0.49
SMC3-201ENST00000361804 MROH5Q6ZUA9 1318 aa11.98□□□□□ -0.49
SMC3-201ENST00000361804 ANKRD65E5RJM6 399 aa11.98□□□□□ -0.49
SMC3-201ENST00000361804 MRPS25P82663 173 aaKnown RBP11.98□□□□□ -0.49
SMC3-201ENST00000361804 FOXR1Q6PIV2 292 aa11.98□□□□□ -0.49
SMC3-201ENST00000361804 BICDL1Q6ZP65 573 aa11.98□□□□□ -0.49
SMC3-201ENST00000361804 ZSCAN10Q96SZ4 725 aaPredicted RBP11.98□□□□□ -0.49
SMC3-201ENST00000361804 VPS18Q9P253 973 aa11.98□□□□□ -0.49
SMC3-201ENST00000361804 DACH1Q9UI36 760 aa11.98□□□□□ -0.49
SMC3-201ENST00000361804 MAGEB6P1A0A0J9YX57 407 aa11.98□□□□□ -0.49
SMC3-201ENST00000361804 USP17L12C9JPN9 530 aa11.98□□□□□ -0.49
SMC3-201ENST00000361804 USP17L21D6R901 530 aa11.98□□□□□ -0.49
SMC3-201ENST00000361804 TTC38Q5R3I4 469 aa11.98□□□□□ -0.49
SMC3-201ENST00000361804 RABGGTAQ92696 567 aa11.98□□□□□ -0.49
SMC3-201ENST00000361804 AATFQ9NY61 560 aaKnown RBP eCLIP11.98□□□□□ -0.49
SMC3-201ENST00000361804 GUCA1BQ9UMX6 200 aa11.98□□□□□ -0.49
SMC3-201ENST00000361804 KIF5CO60282 957 aa11.97□□□□□ -0.49
SMC3-201ENST00000361804 KLK7P49862 253 aa11.97□□□□□ -0.49
SMC3-201ENST00000361804 SRGAP1Q7Z6B7 1085 aa11.97□□□□□ -0.49
SMC3-201ENST00000361804 AK7Q96M32 723 aa11.97□□□□□ -0.49
SMC3-201ENST00000361804 CPVLQ9H3G5 476 aa11.97□□□□□ -0.49
SMC3-201ENST00000361804 SH3RF1Q7Z6J0 888 aa11.97□□□□□ -0.49
SMC3-201ENST00000361804 GSPT2Q8IYD1 628 aaKnown RBP11.97□□□□□ -0.49
SMC3-201ENST00000361804 ADAM21Q9UKJ8 722 aa11.97□□□□□ -0.49
SMC3-201ENST00000361804 ERCC5P28715 1186 aaPredicted RBP11.97□□□□□ -0.49
SMC3-201ENST00000361804 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.97□□□□□ -0.49
SMC3-201ENST00000361804 ZNF579Q8NAF0 562 aaKnown RBP11.97□□□□□ -0.49
SMC3-201ENST00000361804 ESR2Q92731 530 aa11.97□□□□□ -0.49
SMC3-201ENST00000361804 CAPZA3Q96KX2 299 aa11.97□□□□□ -0.49
SMC3-201ENST00000361804 NIP7Q9Y221 180 aaKnown RBP eCLIP11.97□□□□□ -0.49
SMC3-201ENST00000361804 FAM205AQ6ZU69 1335 aa11.97□□□□□ -0.49
SMC3-201ENST00000361804 CNTNAP4Q9C0A0 1308 aa11.97□□□□□ -0.49
SMC3-201ENST00000361804 ARHGAP25P42331 645 aa11.96□□□□□ -0.49
SMC3-201ENST00000361804 RAD51AP2Q09MP3 1159 aa11.96□□□□□ -0.49
SMC3-201ENST00000361804 TROAPQ12815 778 aa11.96□□□□□ -0.49
SMC3-201ENST00000361804 PANX2Q96RD6 677 aa11.96□□□□□ -0.49
SMC3-201ENST00000361804 TRIM66O15016 1216 aa11.96□□□□□ -0.49
SMC3-201ENST00000361804 TUBB4AP04350 444 aa11.96□□□□□ -0.49
SMC3-201ENST00000361804 KRT9P35527 623 aa11.96□□□□□ -0.49
SMC3-201ENST00000361804 SLC35G1Q2M3R5 365 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 130.7 ms