RNA–Protein interactions for RNA: ENST00000361528.8

CNOT4-203, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT4, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-203ENST00000361528 ATXN10Q9UBB4 475 aa12.89□□□□□ -0.35
CNOT4-203ENST00000361528 ZNF510Q9Y2H8 683 aa12.89□□□□□ -0.35
CNOT4-203ENST00000361528 DLG5Q8TDM6 1919 aa12.89□□□□□ -0.35
CNOT4-203ENST00000361528 N4BP2Q86UW6 1770 aaPredicted RBP12.89□□□□□ -0.35
CNOT4-203ENST00000361528 PXDNLA1KZ92 1463 aa12.89□□□□□ -0.35
CNOT4-203ENST00000361528 IFIT3O14879 490 aaKnown RBP12.89□□□□□ -0.35
CNOT4-203ENST00000361528 PRC1O43663 620 aa12.89□□□□□ -0.35
CNOT4-203ENST00000361528 ATP6V1G1O75348 118 aa12.89□□□□□ -0.35
CNOT4-203ENST00000361528 PBX1P40424 430 aa12.89□□□□□ -0.35
CNOT4-203ENST00000361528 SYKP43405 635 aa12.89□□□□□ -0.35
CNOT4-203ENST00000361528 PABPC1LQ4VXU2 614 aaKnown RBP12.89□□□□□ -0.35
CNOT4-203ENST00000361528 ANKRD20A2Q5SQ80 823 aa12.89□□□□□ -0.35
CNOT4-203ENST00000361528 ANKRD20A1Q5TYW2 823 aa12.89□□□□□ -0.35
CNOT4-203ENST00000361528 ANKRD20A3Q5VUR7 823 aa12.89□□□□□ -0.35
CNOT4-203ENST00000361528 TSEN2Q8NCE0 465 aaKnown RBP12.89□□□□□ -0.35
CNOT4-203ENST00000361528 DDX54Q8TDD1 881 aaKnown RBP12.89□□□□□ -0.35
CNOT4-203ENST00000361528 NAF1Q96HR8 494 aaKnown RBP12.89□□□□□ -0.35
CNOT4-203ENST00000361528 GPATCH3Q96I76 525 aa12.89□□□□□ -0.35
CNOT4-203ENST00000361528 CTAGE1Q96RT6 745 aa12.89□□□□□ -0.35
CNOT4-203ENST00000361528 WDR37Q9Y2I8 494 aa12.89□□□□□ -0.35
CNOT4-203ENST00000361528 NFE2L3Q9Y4A8 694 aa12.89□□□□□ -0.35
CNOT4-203ENST00000361528 ZMYM6O95789 1325 aa12.89□□□□□ -0.35
CNOT4-203ENST00000361528 CCT8L1PA6NM43 557 aa12.88□□□□□ -0.35
CNOT4-203ENST00000361528 TRIM14Q14142 442 aa12.88□□□□□ -0.35
CNOT4-203ENST00000361528 FNBP4Q8N3X1 1017 aaPredicted RBP12.88□□□□□ -0.35
CNOT4-203ENST00000361528 AFAP1Q8N556 730 aa12.88□□□□□ -0.35
CNOT4-203ENST00000361528 JAKMIP2Q96AA8 810 aa12.88□□□□□ -0.35
CNOT4-203ENST00000361528 YIPF2Q9BWQ6 316 aa12.88□□□□□ -0.35
CNOT4-203ENST00000361528 KCNMB3Q9NPA1 279 aa12.88□□□□□ -0.35
CNOT4-203ENST00000361528 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.88□□□□□ -0.35
CNOT4-203ENST00000361528 CTNNAL1Q9UBT7 734 aa12.88□□□□□ -0.35
CNOT4-203ENST00000361528 HPSEQ9Y251 543 aa12.88□□□□□ -0.35
CNOT4-203ENST00000361528 L3MBTL1Q9Y468 752 aa12.88□□□□□ -0.35
CNOT4-203ENST00000361528 E7ENQ6 273 aa12.88□□□□□ -0.35
CNOT4-203ENST00000361528 M0R2C6 588 aa12.88□□□□□ -0.35
CNOT4-203ENST00000361528 TRIM37O94972 964 aa12.88□□□□□ -0.35
CNOT4-203ENST00000361528 ATP2A2P16615 1042 aaKnown RBP12.88□□□□□ -0.35
CNOT4-203ENST00000361528 PDE6BP35913 854 aa12.88□□□□□ -0.35
CNOT4-203ENST00000361528 SH3BGRP55822 239 aaPredicted RBP12.88□□□□□ -0.35
CNOT4-203ENST00000361528 PAK2Q13177 524 aa12.88□□□□□ -0.35
CNOT4-203ENST00000361528 ENOX2Q16206 610 aaKnown RBP12.88□□□□□ -0.35
CNOT4-203ENST00000361528 PTPN21Q16825 1174 aa12.88□□□□□ -0.35
CNOT4-203ENST00000361528 KCTD16Q68DU8 428 aa12.88□□□□□ -0.35
CNOT4-203ENST00000361528 KIAA0825Q8IV33 1275 aa12.88□□□□□ -0.35
CNOT4-203ENST00000361528 CCDC155Q8N6L0 562 aa12.88□□□□□ -0.35
CNOT4-203ENST00000361528 OPTNQ96CV9 577 aa12.88□□□□□ -0.35
CNOT4-203ENST00000361528 C14orf93Q9H972 538 aaKnown RBP12.88□□□□□ -0.35
CNOT4-203ENST00000361528 DMAP1Q9NPF5 467 aaPredicted RBP12.88□□□□□ -0.35
CNOT4-203ENST00000361528 CEP131Q9UPN4 1083 aa12.88□□□□□ -0.35
CNOT4-203ENST00000361528 PTPDC1A2A3K4 754 aa12.87□□□□□ -0.35
CNOT4-203ENST00000361528 CYP27B1O15528 508 aa12.87□□□□□ -0.35
CNOT4-203ENST00000361528 E2F6O75461 281 aa12.87□□□□□ -0.35
CNOT4-203ENST00000361528 ALDH1L1O75891 902 aa12.87□□□□□ -0.35
CNOT4-203ENST00000361528 FLOT1O75955 427 aa12.87□□□□□ -0.35
CNOT4-203ENST00000361528 CLTAP09496 248 aa12.87□□□□□ -0.35
CNOT4-203ENST00000361528 YY1P25490 414 aa12.87□□□□□ -0.35
CNOT4-203ENST00000361528 RPL13P26373 211 aaKnown RBP12.87□□□□□ -0.35
CNOT4-203ENST00000361528 BYSLQ13895 437 aaKnown RBP12.87□□□□□ -0.35
CNOT4-203ENST00000361528 ANKS4BQ8N8V4 417 aa12.87□□□□□ -0.35
CNOT4-203ENST00000361528 PPP1R14BQ96C90 147 aa12.87□□□□□ -0.35
CNOT4-203ENST00000361528 RMDN2Q96LZ7 410 aa12.87□□□□□ -0.35
CNOT4-203ENST00000361528 PPANQ9NQ55 473 aaKnown RBP12.87□□□□□ -0.35
CNOT4-203ENST00000361528 PCMTD2Q9NV79 361 aa12.87□□□□□ -0.35
CNOT4-203ENST00000361528 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.87□□□□□ -0.35
CNOT4-203ENST00000361528 SWAP70Q9UH65 585 aa12.87□□□□□ -0.35
CNOT4-203ENST00000361528 MAP3K15Q6ZN16 1313 aa12.87□□□□□ -0.35
CNOT4-203ENST00000361528 SALL1Q9NSC2 1324 aa12.87□□□□□ -0.35
CNOT4-203ENST00000361528 ZNF233A6NK53 670 aa12.86□□□□□ -0.35
CNOT4-203ENST00000361528 SEMA3EO15041 775 aa12.86□□□□□ -0.35
CNOT4-203ENST00000361528 WFS1O76024 890 aa12.86□□□□□ -0.35
CNOT4-203ENST00000361528 ATP1A1P05023 1023 aaKnown RBP12.86□□□□□ -0.35
CNOT4-203ENST00000361528 SCNN1BP51168 640 aa12.86□□□□□ -0.35
CNOT4-203ENST00000361528 VAV2P52735 878 aa12.86□□□□□ -0.35
CNOT4-203ENST00000361528 ITIH4Q14624 930 aa12.86□□□□□ -0.35
CNOT4-203ENST00000361528 TAF11Q15544 211 aa12.86□□□□□ -0.35
CNOT4-203ENST00000361528 Q4G0T1 1027 aa12.86□□□□□ -0.35
CNOT4-203ENST00000361528 RNF168Q8IYW5 571 aaPredicted RBP12.86□□□□□ -0.35
CNOT4-203ENST00000361528 TRIML1Q8N9V2 468 aa12.86□□□□□ -0.35
CNOT4-203ENST00000361528 SMCR8Q8TEV9 937 aaPredicted RBP12.86□□□□□ -0.35
CNOT4-203ENST00000361528 UBA5Q9GZZ9 404 aa12.86□□□□□ -0.35
CNOT4-203ENST00000361528 VCXQ9H320 206 aa12.86□□□□□ -0.35
CNOT4-203ENST00000361528 LRRC42Q9Y546 428 aa12.86□□□□□ -0.35
CNOT4-203ENST00000361528 AGLP35573 1532 aa12.86□□□□□ -0.35
CNOT4-203ENST00000361528 SURF6O75683 361 aaKnown RBP12.86□□□□□ -0.35
CNOT4-203ENST00000361528 KRT14P02533 472 aa12.86□□□□□ -0.35
CNOT4-203ENST00000361528 GSTA2P09210 222 aa12.86□□□□□ -0.35
CNOT4-203ENST00000361528 ZNF24P17028 368 aa12.86□□□□□ -0.35
CNOT4-203ENST00000361528 POLD1P28340 1107 aa12.86□□□□□ -0.35
CNOT4-203ENST00000361528 ERCC5P28715 1186 aaPredicted RBP12.86□□□□□ -0.35
CNOT4-203ENST00000361528 GJA8P48165 433 aa12.86□□□□□ -0.35
CNOT4-203ENST00000361528 NLRP5P59047 1200 aa12.86□□□□□ -0.35
CNOT4-203ENST00000361528 USPL1Q5W0Q7 1092 aa12.86□□□□□ -0.35
CNOT4-203ENST00000361528 LRIG3Q6UXM1 1119 aa12.86□□□□□ -0.35
CNOT4-203ENST00000361528 PNMA8AQ86V59 439 aaPredicted RBP12.86□□□□□ -0.35
CNOT4-203ENST00000361528 C8orf76Q96K31 380 aa12.86□□□□□ -0.35
CNOT4-203ENST00000361528 TCEANC2Q96MN5 208 aa12.86□□□□□ -0.35
CNOT4-203ENST00000361528 NEK1Q96PY6 1258 aa12.86□□□□□ -0.35
CNOT4-203ENST00000361528 TAF1DQ9H5J8 278 aaPredicted RBP12.86□□□□□ -0.35
CNOT4-203ENST00000361528 TMEM165Q9HC07 324 aa12.86□□□□□ -0.35
CNOT4-203ENST00000361528 MIS18AQ9NYP9 233 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms