RNA–Protein interactions for RNA: ENST00000361283.2

CHAMP1-201, Transcript of chromosome alignment maintaining phosphoprotein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHAMP1, Length 3,795 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1-201ENST00000361283 CCDC12Q8WUD4 166 aaPredicted RBP13.15□□□□□ -0.31
CHAMP1-201ENST00000361283 ZBED3Q96IU2 234 aaPredicted RBP13.15□□□□□ -0.31
CHAMP1-201ENST00000361283 HERC5Q9UII4 1024 aaKnown RBP13.15□□□□□ -0.31
CHAMP1-201ENST00000361283 STXBP3O00186 592 aa13.14□□□□□ -0.31
CHAMP1-201ENST00000361283 PTPREP23469 700 aa13.14□□□□□ -0.31
CHAMP1-201ENST00000361283 NDUFA8P51970 172 aa13.14□□□□□ -0.31
CHAMP1-201ENST00000361283 SPDYE2Q495Y8 402 aa13.14□□□□□ -0.31
CHAMP1-201ENST00000361283 CABP5Q9NP86 173 aa13.14□□□□□ -0.31
CHAMP1-201ENST00000361283 TRIM75PA6NK02 468 aa13.14□□□□□ -0.31
CHAMP1-201ENST00000361283 RAD17O75943 681 aa13.14□□□□□ -0.31
CHAMP1-201ENST00000361283 CACNB3P54284 484 aa13.14□□□□□ -0.31
CHAMP1-201ENST00000361283 TYRO3Q06418 890 aa13.14□□□□□ -0.31
CHAMP1-201ENST00000361283 DLGAP5Q15398 846 aa13.14□□□□□ -0.31
CHAMP1-201ENST00000361283 RRP36Q96EU6 259 aaKnown RBP13.14□□□□□ -0.31
CHAMP1-201ENST00000361283 KANSL2Q9H9L4 492 aa13.14□□□□□ -0.31
CHAMP1-201ENST00000361283 FBXO2Q9UK22 296 aaPredicted RBP13.14□□□□□ -0.31
CHAMP1-201ENST00000361283 CAMK4Q16566 473 aa13.14□□□□□ -0.31
CHAMP1-201ENST00000361283 CERKLQ49MI3 558 aaPredicted RBP13.14□□□□□ -0.31
CHAMP1-201ENST00000361283 GPATCH4Q5T3I0 446 aaKnown RBP13.14□□□□□ -0.31
CHAMP1-201ENST00000361283 WWC2Q6AWC2 1192 aa13.14□□□□□ -0.31
CHAMP1-201ENST00000361283 TMEM179Q6ZVK1 233 aa13.14□□□□□ -0.31
CHAMP1-201ENST00000361283 BLIDQ8IZY5 108 aa13.14□□□□□ -0.31
CHAMP1-201ENST00000361283 FAM151AQ8WW52 585 aa13.14□□□□□ -0.31
CHAMP1-201ENST00000361283 SRPRBQ9Y5M8 271 aaKnown RBP13.14□□□□□ -0.31
CHAMP1-201ENST00000361283 ESYT2A0FGR8 921 aa13.13□□□□□ -0.31
CHAMP1-201ENST00000361283 USP17L5A8MUK1 530 aa13.13□□□□□ -0.31
CHAMP1-201ENST00000361283 PFKFB1P16118 471 aa13.13□□□□□ -0.31
CHAMP1-201ENST00000361283 TCP10Q12799 353 aa13.13□□□□□ -0.31
CHAMP1-201ENST00000361283 SHC4Q6S5L8 630 aa13.13□□□□□ -0.31
CHAMP1-201ENST00000361283 PDLIM2Q96JY6 352 aa13.13□□□□□ -0.31
CHAMP1-201ENST00000361283 TRIM34Q9BYJ4 488 aa13.13□□□□□ -0.31
CHAMP1-201ENST00000361283 ZNF70Q9UC06 446 aaPredicted RBP13.13□□□□□ -0.31
CHAMP1-201ENST00000361283 CLIP2Q9UDT6 1046 aa13.13□□□□□ -0.31
CHAMP1-201ENST00000361283 PCDHB6Q9Y5E3 794 aa13.13□□□□□ -0.31
CHAMP1-201ENST00000361283 MRVI1Q9Y6F6 885 aa13.13□□□□□ -0.31
CHAMP1-201ENST00000361283 A0A1B0GVL5 298 aa13.13□□□□□ -0.31
CHAMP1-201ENST00000361283 RPS12P25398 132 aaKnown RBP13.13□□□□□ -0.31
CHAMP1-201ENST00000361283 ZNF543Q08ER8 600 aa13.13□□□□□ -0.31
CHAMP1-201ENST00000361283 R3HDM1Q15032 1099 aaKnown RBP13.13□□□□□ -0.31
CHAMP1-201ENST00000361283 USP17L2Q6R6M4 530 aa13.13□□□□□ -0.31
CHAMP1-201ENST00000361283 ZMYND12Q9H0C1 365 aa13.13□□□□□ -0.31
CHAMP1-201ENST00000361283 NFKBIEO00221 500 aa13.12□□□□□ -0.31
CHAMP1-201ENST00000361283 MARCKSP29966 332 aaPredicted RBP13.12□□□□□ -0.31
CHAMP1-201ENST00000361283 PTGER2P43116 358 aa13.12□□□□□ -0.31
CHAMP1-201ENST00000361283 CXCL9Q07325 125 aa13.12□□□□□ -0.31
CHAMP1-201ENST00000361283 TNIP1Q15025 636 aa13.12□□□□□ -0.31
CHAMP1-201ENST00000361283 SASS6Q6UVJ0 657 aa13.12□□□□□ -0.31
CHAMP1-201ENST00000361283 FAM83AQ86UY5 434 aa13.12□□□□□ -0.31
CHAMP1-201ENST00000361283 EARS2Q5JPH6 523 aaKnown RBP13.12□□□□□ -0.31
CHAMP1-201ENST00000361283 CIAPIN1Q6FI81 312 aa13.12□□□□□ -0.31
CHAMP1-201ENST00000361283 ZSCAN29Q8IWY8 852 aaPredicted RBP13.12□□□□□ -0.31
CHAMP1-201ENST00000361283 FERMT2Q96AC1 680 aa13.12□□□□□ -0.31
CHAMP1-201ENST00000361283 SEC63Q9UGP8 760 aaKnown RBP13.12□□□□□ -0.31
CHAMP1-201ENST00000361283 CNTNAP1P78357 1384 aa13.12□□□□□ -0.31
CHAMP1-201ENST00000361283 PPP1R18Q6NYC8 613 aa13.12□□□□□ -0.31
CHAMP1-201ENST00000361283 DCAF4Q8WV16 495 aa13.12□□□□□ -0.31
CHAMP1-201ENST00000361283 JDP2Q8WYK2 163 aa13.12□□□□□ -0.31
CHAMP1-201ENST00000361283 UPF1Q92900 1129 aaKnown RBP eCLIP13.12□□□□□ -0.31
CHAMP1-201ENST00000361283 TBC1D12O60347 775 aa13.11□□□□□ -0.31
CHAMP1-201ENST00000361283 ZNF202O95125 648 aa13.11□□□□□ -0.31
CHAMP1-201ENST00000361283 GOLGA8HP0CJ92 632 aa13.11□□□□□ -0.31
CHAMP1-201ENST00000361283 VEGFAP15692 232 aaPredicted RBP13.11□□□□□ -0.31
CHAMP1-201ENST00000361283 FAM200AQ8TCP9 573 aa13.11□□□□□ -0.31
CHAMP1-201ENST00000361283 ZNF280AP59817 542 aaPredicted RBP13.11□□□□□ -0.31
CHAMP1-201ENST00000361283 TTC38Q5R3I4 469 aa13.11□□□□□ -0.31
CHAMP1-201ENST00000361283 CKAP2LQ8IYA6 745 aa13.11□□□□□ -0.31
CHAMP1-201ENST00000361283 LRRC47Q8N1G4 583 aaKnown RBP13.11□□□□□ -0.31
CHAMP1-201ENST00000361283 GMCL1P1Q8NEA9 526 aa13.11□□□□□ -0.31
CHAMP1-201ENST00000361283 MTMR8Q96EF0 704 aa13.11□□□□□ -0.31
CHAMP1-201ENST00000361283 TYW1BQ6NUM6 668 aa13.11□□□□□ -0.31
CHAMP1-201ENST00000361283 GPKOWQ92917 476 aaPredicted RBP eCLIP13.11□□□□□ -0.31
CHAMP1-201ENST00000361283 MPHOSPH10O00566 681 aaKnown RBP13.1□□□□□ -0.31
CHAMP1-201ENST00000361283 SYKP43405 635 aa13.1□□□□□ -0.31
CHAMP1-201ENST00000361283 ATP2C1P98194 919 aaPredicted RBP13.1□□□□□ -0.31
CHAMP1-201ENST00000361283 HEATR3Q7Z4Q2 680 aa13.1□□□□□ -0.31
CHAMP1-201ENST00000361283 CSRNP1Q96S65 589 aa13.1□□□□□ -0.31
CHAMP1-201ENST00000361283 GNA11P29992 359 aa13.1□□□□□ -0.31
CHAMP1-201ENST00000361283 STX1AQ16623 288 aa13.1□□□□□ -0.31
CHAMP1-201ENST00000361283 ABCB5Q2M3G0 1257 aa13.1□□□□□ -0.31
CHAMP1-201ENST00000361283 RNF214Q8ND24 703 aa13.1□□□□□ -0.31
CHAMP1-201ENST00000361283 PCDHA6Q9UN73 950 aa13.1□□□□□ -0.31
CHAMP1-201ENST00000361283 PCDHA8Q9Y5H6 950 aa13.1□□□□□ -0.31
CHAMP1-201ENST00000361283 FAM205CA6NFA0 338 aa13.1□□□□□ -0.31
CHAMP1-201ENST00000361283 C6orf50Q9HD87 102 aa13.1□□□□□ -0.31
CHAMP1-201ENST00000361283 FAM13BQ9NYF5 915 aa13.1□□□□□ -0.31
CHAMP1-201ENST00000361283 ZBTB12Q9Y330 459 aaPredicted RBP13.1□□□□□ -0.31
CHAMP1-201ENST00000361283 MYO1BO43795 1136 aa13.09□□□□□ -0.31
CHAMP1-201ENST00000361283 MAP3K10Q02779 954 aa13.09□□□□□ -0.31
CHAMP1-201ENST00000361283 ORC2Q13416 577 aaPredicted RBP13.09□□□□□ -0.31
CHAMP1-201ENST00000361283 RASGRP2Q7LDG7 609 aa13.09□□□□□ -0.31
CHAMP1-201ENST00000361283 EEF2P13639 858 aaKnown RBP13.09□□□□□ -0.31
CHAMP1-201ENST00000361283 ARL6IP4Q66PJ3 421 aaKnown RBP13.09□□□□□ -0.31
CHAMP1-201ENST00000361283 PIK3AP1Q6ZUJ8 805 aa13.09□□□□□ -0.31
CHAMP1-201ENST00000361283 SIAH1Q8IUQ4 282 aa13.09□□□□□ -0.31
CHAMP1-201ENST00000361283 GMCL1Q96IK5 515 aa13.09□□□□□ -0.31
CHAMP1-201ENST00000361283 CLIC6Q96NY7 704 aa13.09□□□□□ -0.31
CHAMP1-201ENST00000361283 KCNH3Q9ULD8 1083 aa13.09□□□□□ -0.31
CHAMP1-201ENST00000361283 PNMA6FA0A0J9YX94 578 aa13.09□□□□□ -0.31
CHAMP1-201ENST00000361283 RBM26Q5T8P6 1007 aaKnown RBP13.09□□□□□ -0.31
CHAMP1-201ENST00000361283 KRT25Q7Z3Z0 450 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms