RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 LHX8Q68G74 356 aa8.56□□□□□ -1.04
CLCN3-202ENST00000360642 Q6ZUG5 572 aa8.56□□□□□ -1.04
CLCN3-202ENST00000360642 STOX1Q6ZVD7 989 aa8.56□□□□□ -1.04
CLCN3-202ENST00000360642 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.56□□□□□ -1.04
CLCN3-202ENST00000360642 GPRASP2Q96D09 838 aa8.56□□□□□ -1.04
CLCN3-202ENST00000360642 GMLQ99445 158 aa8.56□□□□□ -1.04
CLCN3-202ENST00000360642 SPON2Q9BUD6 331 aa8.56□□□□□ -1.04
CLCN3-202ENST00000360642 DSCC1Q9BVC3 393 aa8.56□□□□□ -1.04
CLCN3-202ENST00000360642 RTCBQ9Y3I0 505 aaKnown RBP8.56□□□□□ -1.04
CLCN3-202ENST00000360642 SPEF2Q9C093 1822 aa8.56□□□□□ -1.04
CLCN3-202ENST00000360642 J3QL48 77 aa8.56□□□□□ -1.04
CLCN3-202ENST00000360642 ZIC2O95409 532 aaPredicted RBP8.56□□□□□ -1.04
CLCN3-202ENST00000360642 SSBP05455 408 aaKnown RBP eCLIP8.56□□□□□ -1.04
CLCN3-202ENST00000360642 ARSJQ5FYB0 599 aaPredicted RBP8.56□□□□□ -1.04
CLCN3-202ENST00000360642 BICDL1Q6ZP65 573 aa8.56□□□□□ -1.04
CLCN3-202ENST00000360642 AGXT2Q9BYV1 514 aa8.56□□□□□ -1.04
CLCN3-202ENST00000360642 GPAMQ9HCL2 828 aa8.56□□□□□ -1.04
CLCN3-202ENST00000360642 TOGARAM1Q9Y4F4 1720 aa8.56□□□□□ -1.04
CLCN3-202ENST00000360642 GOLIM4O00461 696 aa8.56□□□□□ -1.04
CLCN3-202ENST00000360642 CDK2AP1O14519 115 aa8.56□□□□□ -1.04
CLCN3-202ENST00000360642 TERF1P54274 439 aa8.56□□□□□ -1.04
CLCN3-202ENST00000360642 STK3Q13188 491 aa8.56□□□□□ -1.04
CLCN3-202ENST00000360642 TRIM28Q13263 835 aaKnown RBP8.56□□□□□ -1.04
CLCN3-202ENST00000360642 TAF1CQ15572 869 aaPredicted RBP8.56□□□□□ -1.04
CLCN3-202ENST00000360642 FAM173BQ6P4H8 233 aa8.56□□□□□ -1.04
CLCN3-202ENST00000360642 FERMT3Q86UX7 667 aa8.56□□□□□ -1.04
CLCN3-202ENST00000360642 SMARCC2Q8TAQ2 1214 aa8.56□□□□□ -1.04
CLCN3-202ENST00000360642 NEUROD6Q96NK8 337 aa8.56□□□□□ -1.04
CLCN3-202ENST00000360642 ADH1AP07327 375 aa8.55□□□□□ -1.04
CLCN3-202ENST00000360642 RHOQP17081 205 aa8.55□□□□□ -1.04
CLCN3-202ENST00000360642 USP5P45974 858 aa8.55□□□□□ -1.04
CLCN3-202ENST00000360642 EXOSC10Q01780 885 aaKnown RBP8.55□□□□□ -1.04
CLCN3-202ENST00000360642 SEPT6Q14141 434 aa8.55□□□□□ -1.04
CLCN3-202ENST00000360642 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.55□□□□□ -1.04
CLCN3-202ENST00000360642 MPNDQ8N594 471 aa8.55□□□□□ -1.04
CLCN3-202ENST00000360642 SCAND2PQ9GZW5 306 aaPredicted RBP8.55□□□□□ -1.04
CLCN3-202ENST00000360642 LAMA4Q16363 1823 aa8.55□□□□□ -1.04
CLCN3-202ENST00000360642 A0A1B0GUL7 405 aa8.55□□□□□ -1.04
CLCN3-202ENST00000360642 JAK2O60674 1132 aa8.55□□□□□ -1.04
CLCN3-202ENST00000360642 PFKFB2O60825 505 aa8.55□□□□□ -1.04
CLCN3-202ENST00000360642 HSPA2P54652 639 aa8.55□□□□□ -1.04
CLCN3-202ENST00000360642 DHX9Q08211 1270 aaKnown RBP8.55□□□□□ -1.04
CLCN3-202ENST00000360642 SCRN1Q12765 414 aa8.55□□□□□ -1.04
CLCN3-202ENST00000360642 TCIRG1Q13488 830 aa8.55□□□□□ -1.04
CLCN3-202ENST00000360642 SLC27A3Q5K4L6 730 aa8.55□□□□□ -1.04
CLCN3-202ENST00000360642 DHX32Q7L7V1 743 aaKnown RBP8.55□□□□□ -1.04
CLCN3-202ENST00000360642 XAGE2Q96GT9 111 aa8.55□□□□□ -1.04
CLCN3-202ENST00000360642 LLPHQ9BRT6 129 aaKnown RBP8.55□□□□□ -1.04
CLCN3-202ENST00000360642 USP25Q9UHP3 1055 aa8.55□□□□□ -1.04
CLCN3-202ENST00000360642 UBAP1LF5GYI3 381 aa8.54□□□□□ -1.04
CLCN3-202ENST00000360642 HSPD1P10809 573 aaKnown RBP8.54□□□□□ -1.04
CLCN3-202ENST00000360642 GJA8P48165 433 aa8.54□□□□□ -1.04
CLCN3-202ENST00000360642 WNT7BP56706 349 aa8.54□□□□□ -1.04
CLCN3-202ENST00000360642 CCDC85BQ15834 202 aaPredicted RBP8.54□□□□□ -1.04
CLCN3-202ENST00000360642 RAB44Q7Z6P3 723 aaPredicted RBP8.54□□□□□ -1.04
CLCN3-202ENST00000360642 PLA2G12BQ9BX93 195 aa8.54□□□□□ -1.04
CLCN3-202ENST00000360642 PUS3Q9BZE2 481 aaKnown RBP8.54□□□□□ -1.04
CLCN3-202ENST00000360642 TNFRSF10AO00220 468 aa8.54□□□□□ -1.04
CLCN3-202ENST00000360642 RNF113AO15541 343 aaKnown RBP8.54□□□□□ -1.04
CLCN3-202ENST00000360642 TPM2P07951 284 aa8.54□□□□□ -1.04
CLCN3-202ENST00000360642 RESTQ13127 1097 aa8.54□□□□□ -1.04
CLCN3-202ENST00000360642 GRM2Q14416 872 aa8.54□□□□□ -1.04
CLCN3-202ENST00000360642 TPTE2Q6XPS3 522 aa8.54□□□□□ -1.04
CLCN3-202ENST00000360642 LEO1Q8WVC0 666 aaPredicted RBP8.54□□□□□ -1.04
CLCN3-202ENST00000360642 HHIPQ96QV1 700 aa8.54□□□□□ -1.04
CLCN3-202ENST00000360642 NIFKQ9BYG3 293 aaKnown RBP8.54□□□□□ -1.04
CLCN3-202ENST00000360642 ELP3Q9H9T3 547 aa8.54□□□□□ -1.04
CLCN3-202ENST00000360642 KCNMB2Q9Y691 235 aa8.54□□□□□ -1.04
CLCN3-202ENST00000360642 MAST3O60307 1309 aa8.54□□□□□ -1.04
CLCN3-202ENST00000360642 ADCY5O95622 1261 aa8.54□□□□□ -1.04
CLCN3-202ENST00000360642 CSF1RP07333 972 aa8.54□□□□□ -1.04
CLCN3-202ENST00000360642 IFIT1P09914 478 aaKnown RBP8.54□□□□□ -1.04
CLCN3-202ENST00000360642 LIG1P18858 919 aa8.54□□□□□ -1.04
CLCN3-202ENST00000360642 FCGRTP55899 365 aa8.54□□□□□ -1.04
CLCN3-202ENST00000360642 RBM43Q6ZSC3 357 aaKnown RBP8.54□□□□□ -1.04
CLCN3-202ENST00000360642 NOP9Q86U38 636 aaKnown RBP8.54□□□□□ -1.04
CLCN3-202ENST00000360642 FBXL16Q8N461 479 aa8.54□□□□□ -1.04
CLCN3-202ENST00000360642 CELF2-AS1Q8N7Q2 184 aa8.54□□□□□ -1.04
CLCN3-202ENST00000360642 FAM169BQ8N8A8 192 aa8.54□□□□□ -1.04
CLCN3-202ENST00000360642 BRF1Q92994 677 aa8.54□□□□□ -1.04
CLCN3-202ENST00000360642 SUSD3Q96L08 255 aa8.54□□□□□ -1.04
CLCN3-202ENST00000360642 GINM1Q9NU53 330 aa8.54□□□□□ -1.04
CLCN3-202ENST00000360642 AKAP2Q9Y2D5 859 aa8.54□□□□□ -1.04
CLCN3-202ENST00000360642 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.54□□□□□ -1.04
CLCN3-202ENST00000360642 PHACTR2O75167 634 aa8.53□□□□□ -1.04
CLCN3-202ENST00000360642 CTDNEP1O95476 244 aa8.53□□□□□ -1.04
CLCN3-202ENST00000360642 RBL2Q08999 1139 aa8.53□□□□□ -1.04
CLCN3-202ENST00000360642 KANK3Q6NY19 840 aa8.53□□□□□ -1.04
CLCN3-202ENST00000360642 NLRP3Q96P20 1036 aa8.53□□□□□ -1.04
CLCN3-202ENST00000360642 A0A0G2JLW4 131 aa8.53□□□□□ -1.04
CLCN3-202ENST00000360642 E7EWF7 191 aa8.53□□□□□ -1.04
CLCN3-202ENST00000360642 AP5Z1O43299 807 aa8.53□□□□□ -1.04
CLCN3-202ENST00000360642 CCDC192P0DO97 292 aa8.53□□□□□ -1.04
CLCN3-202ENST00000360642 GBP2P32456 591 aaPredicted RBP8.53□□□□□ -1.04
CLCN3-202ENST00000360642 WDR4P57081 412 aaKnown RBP8.53□□□□□ -1.04
CLCN3-202ENST00000360642 FBXL19Q6PCT2 694 aa8.53□□□□□ -1.04
CLCN3-202ENST00000360642 NSUN7Q8NE18 718 aaKnown RBP8.53□□□□□ -1.04
CLCN3-202ENST00000360642 PLD4Q96BZ4 506 aa8.53□□□□□ -1.04
CLCN3-202ENST00000360642 LRRC2Q9BYS8 371 aa8.53□□□□□ -1.04
CLCN3-202ENST00000360642 ZSCAN16Q9H4T2 348 aaPredicted RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms