RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 ZBTB43O43298 467 aa14.49□□□□□ -0.09
NIF3L1-201ENST00000359683 SLC10A3P09131 477 aa14.49□□□□□ -0.09
NIF3L1-201ENST00000359683 CALM1P0DP23 149 aa14.49□□□□□ -0.09
NIF3L1-201ENST00000359683 CALM2P0DP24 149 aa14.49□□□□□ -0.09
NIF3L1-201ENST00000359683 CALM3P0DP25 149 aa14.49□□□□□ -0.09
NIF3L1-201ENST00000359683 PDHBP11177 359 aa14.49□□□□□ -0.09
NIF3L1-201ENST00000359683 HMGCS2P54868 508 aa14.49□□□□□ -0.09
NIF3L1-201ENST00000359683 ABHD8Q96I13 439 aa14.49□□□□□ -0.09
NIF3L1-201ENST00000359683 GMCL1Q96IK5 515 aa14.49□□□□□ -0.09
NIF3L1-201ENST00000359683 MS4A4AQ96JQ5 239 aa14.49□□□□□ -0.09
NIF3L1-201ENST00000359683 MYL10Q9BUA6 226 aa14.49□□□□□ -0.09
NIF3L1-201ENST00000359683 FAM155AB1AL88 458 aaPredicted RBP14.48□□□□□ -0.09
NIF3L1-201ENST00000359683 GTF2A2P52657 109 aa14.48□□□□□ -0.09
NIF3L1-201ENST00000359683 NOGQ13253 232 aa14.48□□□□□ -0.09
NIF3L1-201ENST00000359683 SNAPC2Q13487 334 aa14.48□□□□□ -0.09
NIF3L1-201ENST00000359683 GRM4Q14833 912 aa14.48□□□□□ -0.09
NIF3L1-201ENST00000359683 ZYXQ15942 572 aaKnown RBP14.48□□□□□ -0.09
NIF3L1-201ENST00000359683 ME3Q16798 604 aa14.48□□□□□ -0.09
NIF3L1-201ENST00000359683 FANCBQ8NB91 859 aa14.48□□□□□ -0.09
NIF3L1-201ENST00000359683 DCAF4Q8WV16 495 aa14.48□□□□□ -0.09
NIF3L1-201ENST00000359683 ZSCAN31Q96LW9 406 aaPredicted RBP14.48□□□□□ -0.09
NIF3L1-201ENST00000359683 NID2Q14112 1375 aa14.48□□□□□ -0.09
NIF3L1-201ENST00000359683 CA12O43570 354 aa14.48□□□□□ -0.09
NIF3L1-201ENST00000359683 PFKFB2O60825 505 aa14.48□□□□□ -0.09
NIF3L1-201ENST00000359683 ZNF543Q08ER8 600 aa14.48□□□□□ -0.09
NIF3L1-201ENST00000359683 DGKZQ13574 1117 aa14.48□□□□□ -0.09
NIF3L1-201ENST00000359683 MOGSQ13724 837 aa14.48□□□□□ -0.09
NIF3L1-201ENST00000359683 PPP2R5BQ15173 497 aa14.48□□□□□ -0.09
NIF3L1-201ENST00000359683 NOL8Q76FK4 1167 aaKnown RBP14.48□□□□□ -0.09
NIF3L1-201ENST00000359683 SPICE1Q8N0Z3 855 aa14.48□□□□□ -0.09
NIF3L1-201ENST00000359683 PROCA1Q8NCQ7 364 aaPredicted RBP14.48□□□□□ -0.09
NIF3L1-201ENST00000359683 NUP133Q8WUM0 1156 aa14.48□□□□□ -0.09
NIF3L1-201ENST00000359683 ZIC5Q96T25 663 aa14.48□□□□□ -0.09
NIF3L1-201ENST00000359683 FAM217BQ9NTX9 383 aaPredicted RBP14.48□□□□□ -0.09
NIF3L1-201ENST00000359683 TMOD4Q9NZQ9 345 aa14.48□□□□□ -0.09
NIF3L1-201ENST00000359683 MTMR7Q9Y216 660 aa14.48□□□□□ -0.09
NIF3L1-201ENST00000359683 PTPRFP10586 1907 aa14.47□□□□□ -0.09
NIF3L1-201ENST00000359683 PALM3A6NDB9 673 aaPredicted RBP14.47□□□□□ -0.09
NIF3L1-201ENST00000359683 GOLGA8BA8MQT2 603 aa14.47□□□□□ -0.09
NIF3L1-201ENST00000359683 WDR46O15213 610 aaKnown RBP14.47□□□□□ -0.09
NIF3L1-201ENST00000359683 RAD21O60216 631 aa14.47□□□□□ -0.09
NIF3L1-201ENST00000359683 LARGE1O95461 756 aa14.47□□□□□ -0.09
NIF3L1-201ENST00000359683 BMP3P12645 472 aa14.47□□□□□ -0.09
NIF3L1-201ENST00000359683 RXRAP19793 462 aa14.47□□□□□ -0.09
NIF3L1-201ENST00000359683 SLC1A4P43007 532 aa14.47□□□□□ -0.09
NIF3L1-201ENST00000359683 MKRN3Q13064 507 aaKnown RBP14.47□□□□□ -0.09
NIF3L1-201ENST00000359683 FASTKD5Q7L8L6 764 aaKnown RBP14.47□□□□□ -0.09
NIF3L1-201ENST00000359683 RASGRP2Q7LDG7 609 aa14.47□□□□□ -0.09
NIF3L1-201ENST00000359683 MICU3Q86XE3 530 aa14.47□□□□□ -0.09
NIF3L1-201ENST00000359683 RAB11FIP4Q86YS3 637 aa14.47□□□□□ -0.09
NIF3L1-201ENST00000359683 SH2B1Q9NRF2 756 aaPredicted RBP14.47□□□□□ -0.09
NIF3L1-201ENST00000359683 MAD2L2Q9UI95 211 aa14.47□□□□□ -0.09
NIF3L1-201ENST00000359683 NAP1L2Q9ULW6 460 aaPredicted RBP14.47□□□□□ -0.09
NIF3L1-201ENST00000359683 TESPA1A2RU30 521 aaPredicted RBP14.46□□□□□ -0.09
NIF3L1-201ENST00000359683 GOLGA8AA7E2F4 631 aa14.46□□□□□ -0.09
NIF3L1-201ENST00000359683 PARP1P09874 1014 aaKnown RBP14.46□□□□□ -0.09
NIF3L1-201ENST00000359683 CETPP11597 493 aa14.46□□□□□ -0.09
NIF3L1-201ENST00000359683 VCAM1P19320 739 aa14.46□□□□□ -0.09
NIF3L1-201ENST00000359683 METAP2P50579 478 aaKnown RBP eCLIP14.46□□□□□ -0.09
NIF3L1-201ENST00000359683 ASPRV1Q53RT3 343 aa14.46□□□□□ -0.09
NIF3L1-201ENST00000359683 GPATCH4Q5T3I0 446 aaKnown RBP14.46□□□□□ -0.09
NIF3L1-201ENST00000359683 CTCFLQ8NI51 663 aaPredicted RBP14.46□□□□□ -0.09
NIF3L1-201ENST00000359683 TMX3Q96JJ7 454 aa14.46□□□□□ -0.09
NIF3L1-201ENST00000359683 NUP88Q99567 741 aaPredicted RBP14.46□□□□□ -0.09
NIF3L1-201ENST00000359683 SLKQ9H2G2 1235 aaPredicted RBP14.46□□□□□ -0.09
NIF3L1-201ENST00000359683 PLA2G6O60733 806 aa14.45□□□□□ -0.1
NIF3L1-201ENST00000359683 CDC27P30260 824 aa14.45□□□□□ -0.1
NIF3L1-201ENST00000359683 KIF5BP33176 963 aa14.45□□□□□ -0.1
NIF3L1-201ENST00000359683 GNAQP50148 359 aa14.45□□□□□ -0.1
NIF3L1-201ENST00000359683 CCT2P78371 535 aaKnown RBP14.45□□□□□ -0.1
NIF3L1-201ENST00000359683 STK3Q13188 491 aa14.45□□□□□ -0.1
NIF3L1-201ENST00000359683 RTN1Q16799 776 aa14.45□□□□□ -0.1
NIF3L1-201ENST00000359683 FAM83BQ5T0W9 1011 aa14.45□□□□□ -0.1
NIF3L1-201ENST00000359683 GPAT2Q6NUI2 795 aa14.45□□□□□ -0.1
NIF3L1-201ENST00000359683 BTNL9Q6UXG8 535 aa14.45□□□□□ -0.1
NIF3L1-201ENST00000359683 KCTD1Q719H9 257 aa14.45□□□□□ -0.1
NIF3L1-201ENST00000359683 CCDC144CPQ8IYA2 1237 aa14.45□□□□□ -0.1
NIF3L1-201ENST00000359683 STAG2Q8N3U4 1231 aa14.45□□□□□ -0.1
NIF3L1-201ENST00000359683 BRI3BPQ8WY22 251 aa14.45□□□□□ -0.1
NIF3L1-201ENST00000359683 CHMP4CQ96CF2 233 aa14.45□□□□□ -0.1
NIF3L1-201ENST00000359683 RBM28Q9NW13 759 aaKnown RBP14.45□□□□□ -0.1
NIF3L1-201ENST00000359683 RBM19Q9Y4C8 960 aaKnown RBP14.45□□□□□ -0.1
NIF3L1-201ENST00000359683 CCDC196A0A1B0GTZ2 297 aa14.44□□□□□ -0.1
NIF3L1-201ENST00000359683 MANSC4A6NHS7 340 aaPredicted RBP14.44□□□□□ -0.1
NIF3L1-201ENST00000359683 GOLGA8HP0CJ92 632 aa14.44□□□□□ -0.1
NIF3L1-201ENST00000359683 HOXA7P31268 230 aaPredicted RBP14.44□□□□□ -0.1
NIF3L1-201ENST00000359683 ADD1P35611 737 aaKnown RBP14.44□□□□□ -0.1
NIF3L1-201ENST00000359683 INHBEP58166 350 aa14.44□□□□□ -0.1
NIF3L1-201ENST00000359683 SCRN1Q12765 414 aa14.44□□□□□ -0.1
NIF3L1-201ENST00000359683 GADL1Q6ZQY3 521 aa14.44□□□□□ -0.1
NIF3L1-201ENST00000359683 CATSPERGQ6ZRH7 1159 aa14.44□□□□□ -0.1
NIF3L1-201ENST00000359683 NECAB1Q8N987 351 aa14.44□□□□□ -0.1
NIF3L1-201ENST00000359683 GTF3C6Q969F1 213 aa14.44□□□□□ -0.1
NIF3L1-201ENST00000359683 RPAP3Q9H6T3 665 aaPredicted RBP14.44□□□□□ -0.1
NIF3L1-201ENST00000359683 AGTPBP1Q9UPW5 1226 aa14.44□□□□□ -0.1
NIF3L1-201ENST00000359683 FRMPD2Q68DX3 1309 aaPredicted RBP14.44□□□□□ -0.1
NIF3L1-201ENST00000359683 CCL15-CCL14A0A0B4J2E2 113 aa14.44□□□□□ -0.1
NIF3L1-201ENST00000359683 USP17L15C9J2P7 530 aa14.44□□□□□ -0.1
NIF3L1-201ENST00000359683 USP17L13C9JLJ4 530 aa14.44□□□□□ -0.1
NIF3L1-201ENST00000359683 TMEM232C9JQI7 657 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms