RNA–Protein interactions for RNA: ENST00000359429.10

RPE-202, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPE, Length 2,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-202ENST00000359429 IRF2BP1Q8IU81 584 aa12.28□□□□□ -0.44
RPE-202ENST00000359429 TNFRSF25Q93038 417 aa12.28□□□□□ -0.44
RPE-202ENST00000359429 ATF5Q9Y2D1 282 aaPredicted RBP12.28□□□□□ -0.44
RPE-202ENST00000359429 GDAQ9Y2T3 454 aa12.28□□□□□ -0.44
RPE-202ENST00000359429 ZC3H4Q9UPT8 1303 aaKnown RBP12.28□□□□□ -0.44
RPE-202ENST00000359429 TTC26A0AVF1 554 aa12.28□□□□□ -0.44
RPE-202ENST00000359429 MINDY4BA8MYZ0 360 aa12.28□□□□□ -0.44
RPE-202ENST00000359429 KCNJ18B7U540 433 aa12.28□□□□□ -0.44
RPE-202ENST00000359429 IVLP07476 585 aa12.28□□□□□ -0.44
RPE-202ENST00000359429 PPARAQ07869 468 aa12.28□□□□□ -0.44
RPE-202ENST00000359429 KCNJ12Q14500 433 aa12.28□□□□□ -0.44
RPE-202ENST00000359429 HSP90B2PQ58FF3 399 aa12.28□□□□□ -0.44
RPE-202ENST00000359429 PDXDC2PQ6P474 469 aa12.28□□□□□ -0.44
RPE-202ENST00000359429 UBAC1Q9BSL1 405 aa12.28□□□□□ -0.44
RPE-202ENST00000359429 MYO1AQ9UBC5 1043 aa12.28□□□□□ -0.44
RPE-202ENST00000359429 TRIM49BA6NDI0 452 aa12.27□□□□□ -0.44
RPE-202ENST00000359429 RNF40O75150 1001 aa12.27□□□□□ -0.44
RPE-202ENST00000359429 PRPF6O94906 941 aaKnown RBP12.27□□□□□ -0.44
RPE-202ENST00000359429 VEGFAP15692 232 aaPredicted RBP12.27□□□□□ -0.44
RPE-202ENST00000359429 TNNT3P45378 269 aaPredicted RBP12.27□□□□□ -0.44
RPE-202ENST00000359429 NOP2P46087 812 aaKnown RBP12.27□□□□□ -0.44
RPE-202ENST00000359429 BCAMP50895 628 aa12.27□□□□□ -0.44
RPE-202ENST00000359429 USP14P54578 494 aa12.27□□□□□ -0.44
RPE-202ENST00000359429 HERVK_113P62684 666 aa12.27□□□□□ -0.44
RPE-202ENST00000359429 TUBB4BP68371 445 aa12.27□□□□□ -0.44
RPE-202ENST00000359429 UBXN1Q04323 297 aa12.27□□□□□ -0.44
RPE-202ENST00000359429 PAK1Q13153 545 aa12.27□□□□□ -0.44
RPE-202ENST00000359429 TMTC2Q8N394 836 aa12.27□□□□□ -0.44
RPE-202ENST00000359429 NELFBQ8WX92 580 aa12.27□□□□□ -0.44
RPE-202ENST00000359429 FERMT2Q96AC1 680 aa12.27□□□□□ -0.44
RPE-202ENST00000359429 GBP3Q9H0R5 595 aa12.27□□□□□ -0.44
RPE-202ENST00000359429 RWDD2AQ9UIY3 292 aa12.27□□□□□ -0.44
RPE-202ENST00000359429 MYBL2P10244 700 aa12.27□□□□□ -0.45
RPE-202ENST00000359429 ATF3P18847 181 aa12.27□□□□□ -0.45
RPE-202ENST00000359429 TTC38Q5R3I4 469 aa12.27□□□□□ -0.45
RPE-202ENST00000359429 WDR59Q6PJI9 974 aa12.27□□□□□ -0.45
RPE-202ENST00000359429 GSPT2Q8IYD1 628 aaKnown RBP12.27□□□□□ -0.45
RPE-202ENST00000359429 ENAHQ8N8S7 591 aaPredicted RBP12.27□□□□□ -0.45
RPE-202ENST00000359429 IPO4Q8TEX9 1081 aaKnown RBP12.27□□□□□ -0.45
RPE-202ENST00000359429 NACAP1Q9BZK3 213 aa12.27□□□□□ -0.45
RPE-202ENST00000359429 TIAM2Q8IVF5 1701 aa12.27□□□□□ -0.45
RPE-202ENST00000359429 CYP2D7A0A087X1C5 515 aa12.26□□□□□ -0.45
RPE-202ENST00000359429 EIF3CLB5ME19 914 aaKnown RBP12.26□□□□□ -0.45
RPE-202ENST00000359429 PRCPP42785 496 aa12.26□□□□□ -0.45
RPE-202ENST00000359429 PMS1P54277 932 aaKnown RBP12.26□□□□□ -0.45
RPE-202ENST00000359429 ATP2C1P98194 919 aaPredicted RBP12.26□□□□□ -0.45
RPE-202ENST00000359429 CAPZA3Q96KX2 299 aa12.26□□□□□ -0.45
RPE-202ENST00000359429 EIF3CQ99613 913 aaKnown RBP12.26□□□□□ -0.45
RPE-202ENST00000359429 HINFPQ9BQA5 517 aa12.26□□□□□ -0.45
RPE-202ENST00000359429 HPCAL4Q9UM19 191 aa12.26□□□□□ -0.45
RPE-202ENST00000359429 PNPLA7Q6ZV29 1317 aa12.26□□□□□ -0.45
RPE-202ENST00000359429 PAPPAQ13219 1627 aa12.26□□□□□ -0.45
RPE-202ENST00000359429 RCCD1A6NED2 376 aa12.26□□□□□ -0.45
RPE-202ENST00000359429 PSMD14O00487 310 aa12.26□□□□□ -0.45
RPE-202ENST00000359429 PRPF3O43395 683 aaKnown RBP12.26□□□□□ -0.45
RPE-202ENST00000359429 PDE8AO60658 829 aa12.26□□□□□ -0.45
RPE-202ENST00000359429 RCAN1P53805 252 aa12.26□□□□□ -0.45
RPE-202ENST00000359429 CCDC148Q8NFR7 591 aa12.26□□□□□ -0.45
RPE-202ENST00000359429 PIGBQ92521 554 aa12.26□□□□□ -0.45
RPE-202ENST00000359429 MED4Q9NPJ6 270 aa12.26□□□□□ -0.45
RPE-202ENST00000359429 TMOD3Q9NYL9 352 aa12.26□□□□□ -0.45
RPE-202ENST00000359429 IQSEC3Q9UPP2 1182 aaPredicted RBP12.26□□□□□ -0.45
RPE-202ENST00000359429 IL2RBP14784 551 aa12.25□□□□□ -0.45
RPE-202ENST00000359429 AARSP49588 968 aaKnown RBP eCLIP12.25□□□□□ -0.45
RPE-202ENST00000359429 SKIDA1Q1XH10 827 aa12.25□□□□□ -0.45
RPE-202ENST00000359429 PACS2Q86VP3 889 aa12.25□□□□□ -0.45
RPE-202ENST00000359429 SOS2Q07890 1332 aaPredicted RBP12.25□□□□□ -0.45
RPE-202ENST00000359429 PDE2AO00408 941 aaPredicted RBP12.25□□□□□ -0.45
RPE-202ENST00000359429 ZNF185O15231 689 aa12.25□□□□□ -0.45
RPE-202ENST00000359429 PARP1P09874 1014 aaKnown RBP12.25□□□□□ -0.45
RPE-202ENST00000359429 SLC5A1P13866 664 aa12.25□□□□□ -0.45
RPE-202ENST00000359429 XBP1P17861 261 aa12.25□□□□□ -0.45
RPE-202ENST00000359429 EVX2Q03828 476 aa12.25□□□□□ -0.45
RPE-202ENST00000359429 ZNF658Q5TYW1 1059 aaPredicted RBP12.25□□□□□ -0.45
RPE-202ENST00000359429 EEF2KMTQ96G04 330 aa12.25□□□□□ -0.45
RPE-202ENST00000359429 SLC4A9Q96Q91 983 aa12.25□□□□□ -0.45
RPE-202ENST00000359429 MTA3Q9BTC8 594 aa12.25□□□□□ -0.45
RPE-202ENST00000359429 LACRTQ9GZZ8 138 aa12.25□□□□□ -0.45
RPE-202ENST00000359429 PRDM11Q9NQV5 511 aa12.25□□□□□ -0.45
RPE-202ENST00000359429 AGPSO00116 658 aa12.25□□□□□ -0.45
RPE-202ENST00000359429 GTPBP6O43824 516 aaPredicted RBP12.25□□□□□ -0.45
RPE-202ENST00000359429 GNAT2P19087 354 aa12.25□□□□□ -0.45
RPE-202ENST00000359429 MCM7P33993 719 aa12.25□□□□□ -0.45
RPE-202ENST00000359429 TROAPQ12815 778 aa12.25□□□□□ -0.45
RPE-202ENST00000359429 CCDC122Q5T0U0 273 aa12.25□□□□□ -0.45
RPE-202ENST00000359429 PIK3AP1Q6ZUJ8 805 aa12.25□□□□□ -0.45
RPE-202ENST00000359429 MB21D1Q8N884 522 aa12.25□□□□□ -0.45
RPE-202ENST00000359429 OR8K1Q8NGG5 319 aa12.25□□□□□ -0.45
RPE-202ENST00000359429 ZSCAN10Q96SZ4 725 aaPredicted RBP12.25□□□□□ -0.45
RPE-202ENST00000359429 RNF41Q9H4P4 317 aaPredicted RBP12.25□□□□□ -0.45
RPE-202ENST00000359429 SAR1BQ9Y6B6 198 aa12.25□□□□□ -0.45
RPE-202ENST00000359429 DUSP10Q9Y6W6 482 aa12.25□□□□□ -0.45
RPE-202ENST00000359429 MYH8P13535 1937 aa12.24□□□□□ -0.45
RPE-202ENST00000359429 MROH5Q6ZUA9 1318 aa12.24□□□□□ -0.45
RPE-202ENST00000359429 RPN1P04843 607 aaKnown RBP12.24□□□□□ -0.45
RPE-202ENST00000359429 TUBBP07437 444 aa12.24□□□□□ -0.45
RPE-202ENST00000359429 HSPA2P54652 639 aa12.24□□□□□ -0.45
RPE-202ENST00000359429 SPAG1Q07617 926 aa12.24□□□□□ -0.45
RPE-202ENST00000359429 TRIM14Q14142 442 aa12.24□□□□□ -0.45
RPE-202ENST00000359429 PAPD7Q5XG87 772 aaKnown RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms