RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 MPHOSPH10O00566 681 aaKnown RBP5.86□□□□□ -1.47
ATXN3-202ENST00000359366 TOB1P50616 345 aaPredicted RBP5.86□□□□□ -1.47
ATXN3-202ENST00000359366 AKAP17AQ02040 695 aaKnown RBP5.86□□□□□ -1.47
ATXN3-202ENST00000359366 GRIN1Q05586 938 aa5.86□□□□□ -1.47
ATXN3-202ENST00000359366 CSPP1Q1MSJ5 1256 aa5.86□□□□□ -1.47
ATXN3-202ENST00000359366 USP17L2Q6R6M4 530 aa5.86□□□□□ -1.47
ATXN3-202ENST00000359366 TMTC3Q6ZXV5 915 aa5.86□□□□□ -1.47
ATXN3-202ENST00000359366 ZSCAN29Q8IWY8 852 aaPredicted RBP5.86□□□□□ -1.47
ATXN3-202ENST00000359366 TMTC2Q8N394 836 aa5.86□□□□□ -1.47
ATXN3-202ENST00000359366 LINC00301Q8NCQ3 95 aa5.86□□□□□ -1.47
ATXN3-202ENST00000359366 RASGRP4Q8TDF6 673 aa5.86□□□□□ -1.47
ATXN3-202ENST00000359366 ZNF592Q92610 1267 aa5.86□□□□□ -1.47
ATXN3-202ENST00000359366 SYAP1Q96A49 352 aaPredicted RBP5.86□□□□□ -1.47
ATXN3-202ENST00000359366 ZNF396Q96N95 335 aaPredicted RBP5.86□□□□□ -1.47
ATXN3-202ENST00000359366 RCOR1Q9UKL0 485 aa5.86□□□□□ -1.47
ATXN3-202ENST00000359366 RGPD3A6NKT7 1758 aaPredicted RBP5.86□□□□□ -1.47
ATXN3-202ENST00000359366 RGPD4Q7Z3J3 1758 aa5.86□□□□□ -1.47
ATXN3-202ENST00000359366 ELP1O95163 1332 aa5.86□□□□□ -1.47
ATXN3-202ENST00000359366 FRMPD2Q68DX3 1309 aaPredicted RBP5.86□□□□□ -1.47
ATXN3-202ENST00000359366 DDTLA6NHG4 134 aaPredicted RBP5.86□□□□□ -1.47
ATXN3-202ENST00000359366 HOXB3P14651 431 aaPredicted RBP5.86□□□□□ -1.47
ATXN3-202ENST00000359366 NDUFA8P51970 172 aa5.86□□□□□ -1.47
ATXN3-202ENST00000359366 ANO1Q5XXA6 986 aa5.86□□□□□ -1.47
ATXN3-202ENST00000359366 C16orf86Q6ZW13 317 aa5.86□□□□□ -1.47
ATXN3-202ENST00000359366 PODNQ7Z5L7 613 aa5.86□□□□□ -1.47
ATXN3-202ENST00000359366 HOMER1Q86YM7 354 aa5.86□□□□□ -1.47
ATXN3-202ENST00000359366 LARGE2Q8N3Y3 721 aa5.86□□□□□ -1.47
ATXN3-202ENST00000359366 CTCFLQ8NI51 663 aaPredicted RBP5.86□□□□□ -1.47
ATXN3-202ENST00000359366 UBA5Q9GZZ9 404 aa5.86□□□□□ -1.47
ATXN3-202ENST00000359366 NUP62CLQ9H1M0 184 aa5.86□□□□□ -1.47
ATXN3-202ENST00000359366 CABP5Q9NP86 173 aa5.86□□□□□ -1.47
ATXN3-202ENST00000359366 PRDM10Q9NQV6 1147 aa5.86□□□□□ -1.47
ATXN3-202ENST00000359366 ISY1Q9ULR0 285 aaKnown RBP5.86□□□□□ -1.47
ATXN3-202ENST00000359366 CNTNAP5Q8WYK1 1306 aa5.86□□□□□ -1.47
ATXN3-202ENST00000359366 DLEC1Q9Y238 1755 aa5.85□□□□□ -1.47
ATXN3-202ENST00000359366 USP17L5A8MUK1 530 aa5.85□□□□□ -1.47
ATXN3-202ENST00000359366 TCP10L2B9ZVM9 353 aa5.85□□□□□ -1.47
ATXN3-202ENST00000359366 PSMD14O00487 310 aa5.85□□□□□ -1.47
ATXN3-202ENST00000359366 SPTLC2O15270 562 aa5.85□□□□□ -1.47
ATXN3-202ENST00000359366 CYTH3O43739 400 aa5.85□□□□□ -1.47
ATXN3-202ENST00000359366 DEXIO95424 95 aa5.85□□□□□ -1.47
ATXN3-202ENST00000359366 MMP1P03956 469 aa5.85□□□□□ -1.47
ATXN3-202ENST00000359366 KIAA2012Q0VF49 1180 aa5.85□□□□□ -1.47
ATXN3-202ENST00000359366 STRIP1Q5VSL9 837 aa5.85□□□□□ -1.47
ATXN3-202ENST00000359366 TYW1BQ6NUM6 668 aa5.85□□□□□ -1.47
ATXN3-202ENST00000359366 SH3BP5LQ7L8J4 393 aa5.85□□□□□ -1.47
ATXN3-202ENST00000359366 NOSTRINQ8IVI9 506 aa5.85□□□□□ -1.47
ATXN3-202ENST00000359366 SLF2Q8IX21 1173 aa5.85□□□□□ -1.47
ATXN3-202ENST00000359366 PRMT6Q96LA8 375 aaPredicted RBP5.85□□□□□ -1.47
ATXN3-202ENST00000359366 TNMDQ9H2S6 317 aa5.85□□□□□ -1.47
ATXN3-202ENST00000359366 DNAJC18Q9H819 358 aa5.85□□□□□ -1.47
ATXN3-202ENST00000359366 GEMIN8Q9NWZ8 242 aaKnown RBP5.85□□□□□ -1.47
ATXN3-202ENST00000359366 RTEL1Q9NZ71 1219 aa5.85□□□□□ -1.47
ATXN3-202ENST00000359366 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.85□□□□□ -1.47
ATXN3-202ENST00000359366 FAM198AQ9UFP1 575 aa5.85□□□□□ -1.47
ATXN3-202ENST00000359366 MAD2L2Q9UI95 211 aa5.85□□□□□ -1.47
ATXN3-202ENST00000359366 PCDHB6Q9Y5E3 794 aa5.85□□□□□ -1.47
ATXN3-202ENST00000359366 ROBO3Q96MS0 1386 aa5.85□□□□□ -1.47
ATXN3-202ENST00000359366 C10orf71Q711Q0 1435 aa5.85□□□□□ -1.47
ATXN3-202ENST00000359366 CCDC196A0A1B0GTZ2 297 aa5.85□□□□□ -1.47
ATXN3-202ENST00000359366 DDAH1O94760 285 aa5.85□□□□□ -1.47
ATXN3-202ENST00000359366 GDF11O95390 407 aa5.85□□□□□ -1.47
ATXN3-202ENST00000359366 HMGB2P26583 209 aaKnown RBP5.85□□□□□ -1.47
ATXN3-202ENST00000359366 SNW1Q13573 536 aaKnown RBP5.85□□□□□ -1.47
ATXN3-202ENST00000359366 CFAP100Q494V2 611 aa5.85□□□□□ -1.47
ATXN3-202ENST00000359366 ISM2Q6H9L7 571 aa5.85□□□□□ -1.47
ATXN3-202ENST00000359366 MAP3K14Q99558 947 aa5.85□□□□□ -1.47
ATXN3-202ENST00000359366 OSBPL5Q9H0X9 879 aaPredicted RBP5.85□□□□□ -1.47
ATXN3-202ENST00000359366 CLIP2Q9UDT6 1046 aa5.85□□□□□ -1.47
ATXN3-202ENST00000359366 MYH8P13535 1937 aa5.85□□□□□ -1.47
ATXN3-202ENST00000359366 PCP11498 1178 aaKnown RBP5.84□□□□□ -1.47
ATXN3-202ENST00000359366 U2AF2P26368 475 aaKnown RBP eCLIP5.84□□□□□ -1.474e-7■■■□□ 17.3
ATXN3-202ENST00000359366 SHMT1P34896 483 aa5.84□□□□□ -1.47
ATXN3-202ENST00000359366 PSEN1P49768 467 aa5.84□□□□□ -1.47
ATXN3-202ENST00000359366 JAG1P78504 1218 aa5.84□□□□□ -1.47
ATXN3-202ENST00000359366 HEATR3Q7Z4Q2 680 aa5.84□□□□□ -1.47
ATXN3-202ENST00000359366 BRAPQ7Z569 592 aa5.84□□□□□ -1.47
ATXN3-202ENST00000359366 FAM212AQ96EL1 285 aa5.84□□□□□ -1.47
ATXN3-202ENST00000359366 RNF26Q9BY78 433 aaPredicted RBP5.84□□□□□ -1.47
ATXN3-202ENST00000359366 GPCPD1Q9NPB8 672 aa5.84□□□□□ -1.47
ATXN3-202ENST00000359366 SERPINB13Q9UIV8 391 aa5.84□□□□□ -1.47
ATXN3-202ENST00000359366 FOCADQ5VW36 1801 aa5.84□□□□□ -1.47
ATXN3-202ENST00000359366 STK36Q9NRP7 1315 aa5.84□□□□□ -1.47
ATXN3-202ENST00000359366 NID2Q14112 1375 aa5.84□□□□□ -1.47
ATXN3-202ENST00000359366 KLRF2D3W0D1 207 aa5.84□□□□□ -1.47
ATXN3-202ENST00000359366 BIN1O00499 593 aa5.84□□□□□ -1.47
ATXN3-202ENST00000359366 AP5Z1O43299 807 aa5.84□□□□□ -1.47
ATXN3-202ENST00000359366 PRPF3O43395 683 aaKnown RBP5.84□□□□□ -1.47
ATXN3-202ENST00000359366 TAL1P17542 331 aaPredicted RBP5.84□□□□□ -1.47
ATXN3-202ENST00000359366 SLC16A2P36021 539 aa5.84□□□□□ -1.47
ATXN3-202ENST00000359366 RASSF7Q02833 373 aa5.84□□□□□ -1.47
ATXN3-202ENST00000359366 PTPAQ15257 358 aa5.84□□□□□ -1.47
ATXN3-202ENST00000359366 SAFBQ15424 915 aaKnown RBP eCLIP5.84□□□□□ -1.47
ATXN3-202ENST00000359366 ZNF174Q15697 407 aa5.84□□□□□ -1.47
ATXN3-202ENST00000359366 NPY5RQ15761 445 aa5.84□□□□□ -1.47
ATXN3-202ENST00000359366 MAP3K11Q16584 847 aa5.84□□□□□ -1.47
ATXN3-202ENST00000359366 NBPF20Q3BBV1 942 aa5.84□□□□□ -1.47
ATXN3-202ENST00000359366 CCDC93Q567U6 631 aa5.84□□□□□ -1.47
ATXN3-202ENST00000359366 RBM26Q5T8P6 1007 aaKnown RBP5.84□□□□□ -1.47
ATXN3-202ENST00000359366 TTBK2Q6IQ55 1244 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms