RNA–Protein interactions for RNA: ENST00000359128.9

NLRC3-202, Transcript of NLR family CARD domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLRC3, Length 6,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3-202ENST00000359128 RLBP1P12271 317 aa14.34□□□□□ -0.11
NLRC3-202ENST00000359128 SATB1Q01826 763 aa14.34□□□□□ -0.11
NLRC3-202ENST00000359128 C4orf50Q6ZRC1 276 aa14.34□□□□□ -0.11
NLRC3-202ENST00000359128 EPSTI1Q96J88 318 aa14.34□□□□□ -0.11
NLRC3-202ENST00000359128 ZFP91Q96JP5 570 aaPredicted RBP14.34□□□□□ -0.11
NLRC3-202ENST00000359128 CSRNP1Q96S65 589 aa14.34□□□□□ -0.11
NLRC3-202ENST00000359128 CFAP43Q8NDM7 1665 aa14.34□□□□□ -0.11
NLRC3-202ENST00000359128 E7EWF7 191 aa14.34□□□□□ -0.11
NLRC3-202ENST00000359128 CHL1O00533 1208 aa14.34□□□□□ -0.11
NLRC3-202ENST00000359128 ERCC3P19447 782 aa14.34□□□□□ -0.11
NLRC3-202ENST00000359128 CDC37L1Q7L3B6 337 aa14.34□□□□□ -0.11
NLRC3-202ENST00000359128 SDR42E1Q8WUS8 393 aa14.34□□□□□ -0.11
NLRC3-202ENST00000359128 ASIC3Q9UHC3 531 aa14.34□□□□□ -0.11
NLRC3-202ENST00000359128 LEMD3Q9Y2U8 911 aa14.34□□□□□ -0.11
NLRC3-202ENST00000359128 TACC3Q9Y6A5 838 aa14.34□□□□□ -0.11
NLRC3-202ENST00000359128 XRCC6P12956 609 aaKnown RBP eCLIP14.34□□□□□ -0.11
NLRC3-202ENST00000359128 SEPT14Q6ZU15 432 aa14.34□□□□□ -0.11
NLRC3-202ENST00000359128 INTS8Q75QN2 995 aaKnown RBP14.34□□□□□ -0.11
NLRC3-202ENST00000359128 ZNF654Q8IZM8 581 aa14.34□□□□□ -0.11
NLRC3-202ENST00000359128 SEPT9Q9UHD8 586 aaPredicted RBP14.34□□□□□ -0.11
NLRC3-202ENST00000359128 NPHP4O75161 1426 aaPredicted RBP14.34□□□□□ -0.11
NLRC3-202ENST00000359128 MYCP01106 439 aaPredicted RBP14.34□□□□□ -0.11
NLRC3-202ENST00000359128 RNASELQ05823 741 aaKnown RBP14.34□□□□□ -0.11
NLRC3-202ENST00000359128 LGSNQ5TDP6 509 aa14.34□□□□□ -0.11
NLRC3-202ENST00000359128 KRT40Q6A162 431 aa14.34□□□□□ -0.11
NLRC3-202ENST00000359128 BLZF1Q9H2G9 400 aa14.34□□□□□ -0.11
NLRC3-202ENST00000359128 ANKFY1Q9P2R3 1169 aa14.34□□□□□ -0.11
NLRC3-202ENST00000359128 LRRIQ4A6NIV6 560 aa14.34□□□□□ -0.11
NLRC3-202ENST00000359128 XPOTO43592 962 aaKnown RBP14.34□□□□□ -0.11
NLRC3-202ENST00000359128 ZSCAN20P17040 1043 aaPredicted RBP14.34□□□□□ -0.11
NLRC3-202ENST00000359128 POSTNQ15063 836 aa14.34□□□□□ -0.11
NLRC3-202ENST00000359128 RETREG2Q8NC44 543 aa14.34□□□□□ -0.11
NLRC3-202ENST00000359128 MAIP1Q8WWC4 291 aa14.34□□□□□ -0.11
NLRC3-202ENST00000359128 SEPT10Q9P0V9 454 aa14.34□□□□□ -0.11
NLRC3-202ENST00000359128 HESX1Q9UBX0 185 aa14.34□□□□□ -0.11
NLRC3-202ENST00000359128 TECP42680 631 aa14.33□□□□□ -0.11
NLRC3-202ENST00000359128 MUM1L1Q5H9M0 696 aa14.33□□□□□ -0.11
NLRC3-202ENST00000359128 MIS18BP1Q6P0N0 1132 aa14.33□□□□□ -0.11
NLRC3-202ENST00000359128 GOLGA5Q8TBA6 731 aa14.33□□□□□ -0.11
NLRC3-202ENST00000359128 RSAD2Q8WXG1 361 aa14.33□□□□□ -0.11
NLRC3-202ENST00000359128 TSPOAP1O95153 1857 aa14.33□□□□□ -0.12
NLRC3-202ENST00000359128 TMEM191BP0C7N4 346 aa14.33□□□□□ -0.12
NLRC3-202ENST00000359128 CCND2P30279 289 aa14.33□□□□□ -0.12
NLRC3-202ENST00000359128 KLHL30Q0D2K2 578 aa14.33□□□□□ -0.12
NLRC3-202ENST00000359128 SYT10Q6XYQ8 523 aa14.33□□□□□ -0.12
NLRC3-202ENST00000359128 TTLL7Q6ZT98 887 aa14.33□□□□□ -0.12
NLRC3-202ENST00000359128 TMEM94Q12767 1356 aa14.33□□□□□ -0.12
NLRC3-202ENST00000359128 PCCAP05165 728 aaPredicted RBP14.33□□□□□ -0.12
NLRC3-202ENST00000359128 IFNL3Q8IZI9 196 aa14.33□□□□□ -0.12
NLRC3-202ENST00000359128 BSPRYQ5W0U4 402 aa14.33□□□□□ -0.12
NLRC3-202ENST00000359128 PDZD4Q76G19 769 aaPredicted RBP14.33□□□□□ -0.12
NLRC3-202ENST00000359128 NOP9Q86U38 636 aaKnown RBP14.33□□□□□ -0.12
NLRC3-202ENST00000359128 BLIDQ8IZY5 108 aa14.33□□□□□ -0.12
NLRC3-202ENST00000359128 SECISBP2LQ93073 1101 aaKnown RBP14.33□□□□□ -0.12
NLRC3-202ENST00000359128 LSM14BQ9BX40 385 aaKnown RBP14.33□□□□□ -0.12
NLRC3-202ENST00000359128 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.33□□□□□ -0.12
NLRC3-202ENST00000359128 PARP2Q9UGN5 583 aa14.33□□□□□ -0.12
NLRC3-202ENST00000359128 BLMP54132 1417 aaPredicted RBP14.33□□□□□ -0.12
NLRC3-202ENST00000359128 MAN1A1P33908 653 aa14.33□□□□□ -0.12
NLRC3-202ENST00000359128 ELMSAN1Q6PJG2 1045 aa14.33□□□□□ -0.12
NLRC3-202ENST00000359128 DBNDD1Q9H9R9 158 aa14.33□□□□□ -0.12
NLRC3-202ENST00000359128 PANK4Q9NVE7 773 aa14.33□□□□□ -0.12
NLRC3-202ENST00000359128 CFAP65Q6ZU64 1925 aaKnown RBP14.32□□□□□ -0.12
NLRC3-202ENST00000359128 N4BP1O75113 896 aaKnown RBP14.32□□□□□ -0.12
NLRC3-202ENST00000359128 PIK3CAP42336 1068 aa14.32□□□□□ -0.12
NLRC3-202ENST00000359128 MAP7Q14244 749 aa14.32□□□□□ -0.12
NLRC3-202ENST00000359128 Q3C1V9 767 aa14.32□□□□□ -0.12
NLRC3-202ENST00000359128 NAPGQ99747 312 aaPredicted RBP14.32□□□□□ -0.12
NLRC3-202ENST00000359128 ADD3Q9UEY8 706 aaKnown RBP14.32□□□□□ -0.12
NLRC3-202ENST00000359128 PTPRKQ15262 1439 aa14.32□□□□□ -0.12
NLRC3-202ENST00000359128 PFDN6O15212 129 aa14.32□□□□□ -0.12
NLRC3-202ENST00000359128 MLKLQ8NB16 471 aa14.32□□□□□ -0.12
NLRC3-202ENST00000359128 RAB20Q9NX57 234 aa14.32□□□□□ -0.12
NLRC3-202ENST00000359128 PCDHA12Q9UN75 941 aa14.32□□□□□ -0.12
NLRC3-202ENST00000359128 KDM5AP29375 1690 aaKnown RBP14.32□□□□□ -0.12
NLRC3-202ENST00000359128 DNMT1P26358 1616 aaKnown RBP14.32□□□□□ -0.12
NLRC3-202ENST00000359128 ATP5JP18859 108 aa14.32□□□□□ -0.12
NLRC3-202ENST00000359128 NLRP12P59046 1061 aa14.32□□□□□ -0.12
NLRC3-202ENST00000359128 DNAJC21Q5F1R6 531 aaKnown RBP14.32□□□□□ -0.12
NLRC3-202ENST00000359128 ARFGAP2Q8N6H7 521 aa14.32□□□□□ -0.12
NLRC3-202ENST00000359128 C1orf112Q9NSG2 853 aa14.32□□□□□ -0.12
NLRC3-202ENST00000359128 ARHGEF12Q9NZN5 1544 aa14.32□□□□□ -0.12
NLRC3-202ENST00000359128 PLEKHG3A1L390 1219 aa14.32□□□□□ -0.12
NLRC3-202ENST00000359128 C8orf74Q6P047 294 aa14.32□□□□□ -0.12
NLRC3-202ENST00000359128 MIS12Q9H081 205 aa14.32□□□□□ -0.12
NLRC3-202ENST00000359128 TAB2Q9NYJ8 693 aa14.32□□□□□ -0.12
NLRC3-202ENST00000359128 ABCA5Q8WWZ7 1642 aa14.32□□□□□ -0.12
NLRC3-202ENST00000359128 GOLGA8HP0CJ92 632 aa14.32□□□□□ -0.12
NLRC3-202ENST00000359128 XPAP23025 273 aaPredicted RBP14.32□□□□□ -0.12
NLRC3-202ENST00000359128 PTPREP23469 700 aa14.32□□□□□ -0.12
NLRC3-202ENST00000359128 SARNPP82979 210 aaKnown RBP14.32□□□□□ -0.12
NLRC3-202ENST00000359128 HADHQ16836 314 aaKnown RBP14.32□□□□□ -0.12
NLRC3-202ENST00000359128 PNMA1Q8ND90 353 aa14.31□□□□□ -0.12
NLRC3-202ENST00000359128 NUB1Q9Y5A7 615 aa14.31□□□□□ -0.12
NLRC3-202ENST00000359128 SEMA3EO15041 775 aa14.31□□□□□ -0.12
NLRC3-202ENST00000359128 TRERF1Q96PN7 1200 aa14.31□□□□□ -0.12
NLRC3-202ENST00000359128 PNMA6EA0A0J9YXQ4 647 aa14.31□□□□□ -0.12
NLRC3-202ENST00000359128 VIMP08670 466 aaKnown RBP14.31□□□□□ -0.12
NLRC3-202ENST00000359128 RPUSD2Q8IZ73 545 aaKnown RBP14.31□□□□□ -0.12
NLRC3-202ENST00000359128 SLC10A4Q96EP9 437 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms