RNA–Protein interactions for RNA: ENST00000358170.6

CD46-205, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,371 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-205ENST00000358170 CCNL1Q9UK58 526 aaPredicted RBP9.34□□□□□ -0.91
CD46-205ENST00000358170 PPP1R3GB7ZBB8 358 aa9.34□□□□□ -0.91
CD46-205ENST00000358170 MCM6Q14566 821 aa9.34□□□□□ -0.91
CD46-205ENST00000358170 BMS1Q14692 1282 aaKnown RBP9.34□□□□□ -0.91
CD46-205ENST00000358170 DTHD1Q6ZMT9 781 aa9.34□□□□□ -0.91
CD46-205ENST00000358170 AMOTL1Q8IY63 956 aa9.34□□□□□ -0.91
CD46-205ENST00000358170 TRIM47Q96LD4 638 aa9.34□□□□□ -0.91
CD46-205ENST00000358170 TOGARAM1Q9Y4F4 1720 aa9.34□□□□□ -0.91
CD46-205ENST00000358170 ENC1O14682 589 aa9.33□□□□□ -0.92
CD46-205ENST00000358170 RIMBP2O15034 1052 aa9.33□□□□□ -0.92
CD46-205ENST00000358170 PRCPP42785 496 aa9.33□□□□□ -0.92
CD46-205ENST00000358170 NAPAP54920 295 aa9.33□□□□□ -0.92
CD46-205ENST00000358170 PAK1Q13153 545 aa9.33□□□□□ -0.92
CD46-205ENST00000358170 SYCP1Q15431 976 aa9.33□□□□□ -0.92
CD46-205ENST00000358170 SKIDA1Q1XH10 827 aa9.33□□□□□ -0.92
CD46-205ENST00000358170 FBXO33Q7Z6M2 555 aa9.33□□□□□ -0.92
CD46-205ENST00000358170 CLEC10AQ8IUN9 316 aa9.33□□□□□ -0.92
CD46-205ENST00000358170 MTRQ99707 1265 aa9.33□□□□□ -0.92
CD46-205ENST00000358170 TRIM10Q9UDY6 481 aa9.33□□□□□ -0.92
CD46-205ENST00000358170 RTCBQ9Y3I0 505 aaKnown RBP9.33□□□□□ -0.92
CD46-205ENST00000358170 COL1A1P02452 1464 aaPredicted RBP9.33□□□□□ -0.92
CD46-205ENST00000358170 RPN1P04843 607 aaKnown RBP9.33□□□□□ -0.92
CD46-205ENST00000358170 ERCC5P28715 1186 aaPredicted RBP9.33□□□□□ -0.92
CD46-205ENST00000358170 SF3B3Q15393 1217 aaKnown RBP9.33□□□□□ -0.92
CD46-205ENST00000358170 NPY5RQ15761 445 aa9.33□□□□□ -0.92
CD46-205ENST00000358170 WWC2Q6AWC2 1192 aa9.33□□□□□ -0.92
CD46-205ENST00000358170 ZFP91Q96JP5 570 aaPredicted RBP9.33□□□□□ -0.92
CD46-205ENST00000358170 CHP1Q99653 195 aa9.33□□□□□ -0.92
CD46-205ENST00000358170 SRRTQ9BXP5 876 aaKnown RBP9.33□□□□□ -0.92
CD46-205ENST00000358170 IL17RBQ9NRM6 502 aa9.33□□□□□ -0.92
CD46-205ENST00000358170 MORC2Q9Y6X9 1032 aaPredicted RBP9.33□□□□□ -0.92
CD46-205ENST00000358170 PLEKHG2Q9H7P9 1386 aa9.33□□□□□ -0.92
CD46-205ENST00000358170 BAZ2AQ9UIF9 1905 aaKnown RBP9.33□□□□□ -0.92
CD46-205ENST00000358170 A0A1B0GTH6 734 aa9.33□□□□□ -0.92
CD46-205ENST00000358170 KCNJ18B7U540 433 aa9.33□□□□□ -0.92
CD46-205ENST00000358170 C6orf229H3BNL8 230 aa9.33□□□□□ -0.92
CD46-205ENST00000358170 CCNT1O60563 726 aaKnown RBP9.33□□□□□ -0.92
CD46-205ENST00000358170 SSBP05455 408 aaKnown RBP eCLIP9.33□□□□□ -0.92
CD46-205ENST00000358170 PNMA6AP0CW24 399 aaPredicted RBP9.33□□□□□ -0.92
CD46-205ENST00000358170 KCNJ12Q14500 433 aa9.33□□□□□ -0.92
CD46-205ENST00000358170 CCDC93Q567U6 631 aa9.33□□□□□ -0.92
CD46-205ENST00000358170 TRIML1Q8N9V2 468 aa9.33□□□□□ -0.92
CD46-205ENST00000358170 GSDMAQ96QA5 445 aa9.33□□□□□ -0.92
CD46-205ENST00000358170 GTPBP4Q9BZE4 634 aaKnown RBP9.33□□□□□ -0.92
CD46-205ENST00000358170 BIN2Q9UBW5 565 aaPredicted RBP9.33□□□□□ -0.92
CD46-205ENST00000358170 ADD3Q9UEY8 706 aaKnown RBP9.33□□□□□ -0.92
CD46-205ENST00000358170 FRMPD2Q68DX3 1309 aaPredicted RBP9.32□□□□□ -0.92
CD46-205ENST00000358170 PHLPP2Q6ZVD8 1323 aa9.32□□□□□ -0.92
CD46-205ENST00000358170 MARCH6O60337 910 aa9.32□□□□□ -0.92
CD46-205ENST00000358170 DDAH1O94760 285 aa9.32□□□□□ -0.92
CD46-205ENST00000358170 SLURP2P0DP57 97 aa9.32□□□□□ -0.92
CD46-205ENST00000358170 IDEP14735 1019 aa9.32□□□□□ -0.92
CD46-205ENST00000358170 TECP42680 631 aa9.32□□□□□ -0.92
CD46-205ENST00000358170 ATP2C1P98194 919 aaPredicted RBP9.32□□□□□ -0.92
CD46-205ENST00000358170 TBX2Q13207 712 aaPredicted RBP9.32□□□□□ -0.92
CD46-205ENST00000358170 PFKFB3Q16875 520 aaPredicted RBP9.32□□□□□ -0.92
CD46-205ENST00000358170 TSR1Q2NL82 804 aaKnown RBP9.32□□□□□ -0.92
CD46-205ENST00000358170 RCSD1Q6JBY9 416 aa9.32□□□□□ -0.92
CD46-205ENST00000358170 SLC35F6Q8N357 371 aa9.32□□□□□ -0.92
CD46-205ENST00000358170 ARHGEF1Q92888 912 aaKnown RBP9.32□□□□□ -0.92
CD46-205ENST00000358170 CAPZA3Q96KX2 299 aa9.32□□□□□ -0.92
CD46-205ENST00000358170 GDAP1L1Q96MZ0 367 aa9.32□□□□□ -0.92
CD46-205ENST00000358170 PARD6BQ9BYG5 372 aa9.32□□□□□ -0.92
CD46-205ENST00000358170 ANAPC4Q9UJX5 808 aa9.32□□□□□ -0.92
CD46-205ENST00000358170 ADGRG1Q9Y653 693 aa9.32□□□□□ -0.92
CD46-205ENST00000358170 NUP98P52948 1817 aa9.32□□□□□ -0.92
CD46-205ENST00000358170 KLRF2D3W0D1 207 aa9.32□□□□□ -0.92
CD46-205ENST00000358170 PHACTR2O75167 634 aa9.32□□□□□ -0.92
CD46-205ENST00000358170 TADA3O75528 432 aa9.32□□□□□ -0.92
CD46-205ENST00000358170 GYPCP04921 128 aa9.32□□□□□ -0.92
CD46-205ENST00000358170 TXKP42681 527 aa9.32□□□□□ -0.92
CD46-205ENST00000358170 COPB1P53618 953 aaKnown RBP9.32□□□□□ -0.92
CD46-205ENST00000358170 PMS1P54277 932 aaKnown RBP9.32□□□□□ -0.92
CD46-205ENST00000358170 DRC1Q96MC2 740 aa9.32□□□□□ -0.92
CD46-205ENST00000358170 ATP8A2Q9NTI2 1148 aa9.32□□□□□ -0.92
CD46-205ENST00000358170 SPEF2Q9C093 1822 aa9.32□□□□□ -0.92
CD46-205ENST00000358170 UFL1O94874 794 aa9.32□□□□□ -0.92
CD46-205ENST00000358170 ASIC1P78348 528 aa9.32□□□□□ -0.92
CD46-205ENST00000358170 PPP2R5BQ15173 497 aa9.32□□□□□ -0.92
CD46-205ENST00000358170 ENOX2Q16206 610 aaKnown RBP9.32□□□□□ -0.92
CD46-205ENST00000358170 NT5DC1Q5TFE4 455 aa9.32□□□□□ -0.92
CD46-205ENST00000358170 CLEC4GQ6UXB4 293 aa9.32□□□□□ -0.92
CD46-205ENST00000358170 DYMQ7RTS9 669 aa9.32□□□□□ -0.92
CD46-205ENST00000358170 GJA10Q969M2 543 aa9.32□□□□□ -0.92
CD46-205ENST00000358170 MAGEC2Q9UBF1 373 aaPredicted RBP9.32□□□□□ -0.92
CD46-205ENST00000358170 UBR2Q8IWV8 1755 aa9.31□□□□□ -0.92
CD46-205ENST00000358170 MYH7P12883 1935 aa9.31□□□□□ -0.92
CD46-205ENST00000358170 FAM170AA1A519 330 aa9.31□□□□□ -0.92
CD46-205ENST00000358170 MFAP3LO75121 409 aa9.31□□□□□ -0.92
CD46-205ENST00000358170 BMP15O95972 392 aa9.31□□□□□ -0.92
CD46-205ENST00000358170 DNA2P51530 1060 aa9.31□□□□□ -0.92
CD46-205ENST00000358170 CDCA7Q9BWT1 371 aaPredicted RBP9.31□□□□□ -0.92
CD46-205ENST00000358170 SUGCTQ9HAC7 445 aa9.31□□□□□ -0.92
CD46-205ENST00000358170 GPCPD1Q9NPB8 672 aa9.31□□□□□ -0.92
CD46-205ENST00000358170 ARPP21Q9UBL0 812 aaPredicted RBP9.31□□□□□ -0.92
CD46-205ENST00000358170 BAG3O95817 575 aa9.31□□□□□ -0.92
CD46-205ENST00000358170 CALML3P27482 149 aa9.31□□□□□ -0.92
CD46-205ENST00000358170 KLK7P49862 253 aa9.31□□□□□ -0.92
CD46-205ENST00000358170 CHMP4BP1P59074 171 aa9.31□□□□□ -0.92
CD46-205ENST00000358170 SOGA3Q5TF21 947 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms