RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 TOB1P50616 345 aaPredicted RBP16.37■□□□□ 0.21
NIPAL3-203ENST00000358028 AKAP17AQ02040 695 aaKnown RBP16.37■□□□□ 0.21
NIPAL3-203ENST00000358028 RILPL1Q5EBL4 403 aa16.37■□□□□ 0.21
NIPAL3-203ENST00000358028 LDHDQ86WU2 507 aa16.37■□□□□ 0.21
NIPAL3-203ENST00000358028 KRI1Q8N9T8 703 aaKnown RBP16.37■□□□□ 0.21
NIPAL3-203ENST00000358028 KLRG1Q96E93 195 aa16.37■□□□□ 0.21
NIPAL3-203ENST00000358028 ARPP21Q9UBL0 812 aaPredicted RBP16.37■□□□□ 0.21
NIPAL3-203ENST00000358028 PAXBP1Q9Y5B6 917 aa16.37■□□□□ 0.21
NIPAL3-203ENST00000358028 TBC1D10BQ4KMP7 808 aaPredicted RBP16.36■□□□□ 0.21
NIPAL3-203ENST00000358028 SBK1Q52WX2 424 aa16.36■□□□□ 0.21
NIPAL3-203ENST00000358028 PNMA8AQ86V59 439 aaPredicted RBP16.36■□□□□ 0.21
NIPAL3-203ENST00000358028 KIAA0825Q8IV33 1275 aa16.36■□□□□ 0.21
NIPAL3-203ENST00000358028 ELOA2Q8IYF1 753 aaPredicted RBP16.36■□□□□ 0.21
NIPAL3-203ENST00000358028 OSBPL5Q9H0X9 879 aaPredicted RBP16.36■□□□□ 0.21
NIPAL3-203ENST00000358028 H7C1D1 291 aa16.36■□□□□ 0.21
NIPAL3-203ENST00000358028 BIN1O00499 593 aa16.36■□□□□ 0.21
NIPAL3-203ENST00000358028 IKBKBO14920 756 aa16.36■□□□□ 0.21
NIPAL3-203ENST00000358028 PRPF3O43395 683 aaKnown RBP16.36■□□□□ 0.21
NIPAL3-203ENST00000358028 MYO1BO43795 1136 aa16.36■□□□□ 0.21
NIPAL3-203ENST00000358028 IGSF3O75054 1194 aa16.36■□□□□ 0.21
NIPAL3-203ENST00000358028 USP17L8P0C7I0 530 aa16.36■□□□□ 0.21
NIPAL3-203ENST00000358028 HIRAP54198 1017 aaPredicted RBP16.36■□□□□ 0.21
NIPAL3-203ENST00000358028 ZNF280AP59817 542 aaPredicted RBP16.36■□□□□ 0.21
NIPAL3-203ENST00000358028 FUT2Q10981 343 aa16.36■□□□□ 0.21
NIPAL3-203ENST00000358028 MFSD14BQ5SR56 506 aa16.36■□□□□ 0.21
NIPAL3-203ENST00000358028 USP50Q70EL3 339 aaPredicted RBP16.36■□□□□ 0.21
NIPAL3-203ENST00000358028 TUBE1Q9UJT0 475 aa16.36■□□□□ 0.21
NIPAL3-203ENST00000358028 RIOK3O14730 519 aaKnown RBP16.35■□□□□ 0.21
NIPAL3-203ENST00000358028 CTIFO43310 598 aaKnown RBP16.35■□□□□ 0.21
NIPAL3-203ENST00000358028 XBP1P17861 261 aa16.35■□□□□ 0.21
NIPAL3-203ENST00000358028 EVX2Q03828 476 aa16.35■□□□□ 0.21
NIPAL3-203ENST00000358028 NR5A1Q13285 461 aa16.35■□□□□ 0.21
NIPAL3-203ENST00000358028 SYCP1Q15431 976 aa16.35■□□□□ 0.21
NIPAL3-203ENST00000358028 PKN1Q16512 942 aa16.35■□□□□ 0.21
NIPAL3-203ENST00000358028 RBM26Q5T8P6 1007 aaKnown RBP16.35■□□□□ 0.21
NIPAL3-203ENST00000358028 DZIP1Q86YF9 867 aaKnown RBP16.35■□□□□ 0.21
NIPAL3-203ENST00000358028 OXER1Q8TDS5 423 aa16.35■□□□□ 0.21
NIPAL3-203ENST00000358028 FBXO2Q9UK22 296 aaPredicted RBP16.35■□□□□ 0.21
NIPAL3-203ENST00000358028 F8W031 263 aaPredicted RBP16.34■□□□□ 0.21
NIPAL3-203ENST00000358028 PLEKHA8P1O95397 391 aa16.34■□□□□ 0.21
NIPAL3-203ENST00000358028 CYP2D6P10635 497 aa16.34■□□□□ 0.21
NIPAL3-203ENST00000358028 FKBP1AP62942 108 aaKnown RBP16.34■□□□□ 0.21
NIPAL3-203ENST00000358028 TROAPQ12815 778 aa16.34■□□□□ 0.21
NIPAL3-203ENST00000358028 GRIK5Q16478 980 aa16.34■□□□□ 0.21
NIPAL3-203ENST00000358028 KIF4BQ2VIQ3 1234 aa16.34■□□□□ 0.21
NIPAL3-203ENST00000358028 KRBA2Q6ZNG9 492 aa16.34■□□□□ 0.21
NIPAL3-203ENST00000358028 WDR66Q8TBY9 1149 aa16.34■□□□□ 0.21
NIPAL3-203ENST00000358028 SHISA4Q96DD7 197 aa16.34■□□□□ 0.21
NIPAL3-203ENST00000358028 NOL10Q9BSC4 688 aaKnown RBP16.34■□□□□ 0.21
NIPAL3-203ENST00000358028 KCNH3Q9ULD8 1083 aa16.34■□□□□ 0.21
NIPAL3-203ENST00000358028 CEP131Q9UPN4 1083 aa16.34■□□□□ 0.21
NIPAL3-203ENST00000358028 CLEC11AQ9Y240 323 aa16.34■□□□□ 0.21
NIPAL3-203ENST00000358028 PASKQ96RG2 1323 aa16.34■□□□□ 0.21
NIPAL3-203ENST00000358028 PTPREP23469 700 aa16.33■□□□□ 0.21
NIPAL3-203ENST00000358028 TMTC3Q6ZXV5 915 aa16.33■□□□□ 0.21
NIPAL3-203ENST00000358028 CCDC150Q8NCX0 1101 aa16.33■□□□□ 0.21
NIPAL3-203ENST00000358028 PHF20Q9BVI0 1012 aa16.33■□□□□ 0.21
NIPAL3-203ENST00000358028 MYOZ2Q9NPC6 264 aa16.33■□□□□ 0.21
NIPAL3-203ENST00000358028 TRPM7Q96QT4 1865 aa16.33■□□□□ 0.2
NIPAL3-203ENST00000358028 SKILP12757 684 aa16.33■□□□□ 0.2
NIPAL3-203ENST00000358028 TNNT1P13805 278 aa16.33■□□□□ 0.2
NIPAL3-203ENST00000358028 KRT2P35908 639 aa16.33■□□□□ 0.2
NIPAL3-203ENST00000358028 KCNJ6P48051 423 aa16.33■□□□□ 0.2
NIPAL3-203ENST00000358028 PDE4BQ07343 736 aa16.33■□□□□ 0.2
NIPAL3-203ENST00000358028 TPD52L1Q16890 204 aaPredicted RBP16.33■□□□□ 0.2
NIPAL3-203ENST00000358028 VPS54Q9P1Q0 977 aa16.33■□□□□ 0.2
NIPAL3-203ENST00000358028 PCDHB6Q9Y5E3 794 aa16.33■□□□□ 0.2
NIPAL3-203ENST00000358028 ASTN2O75129 1339 aaPredicted RBP16.33■□□□□ 0.2
NIPAL3-203ENST00000358028 NAV1Q8NEY1 1877 aa16.32■□□□□ 0.2
NIPAL3-203ENST00000358028 KIF2AO00139 706 aaPredicted RBP16.32■□□□□ 0.2
NIPAL3-203ENST00000358028 ITGBL1O95965 494 aaPredicted RBP16.32■□□□□ 0.2
NIPAL3-203ENST00000358028 LDHBP07195 334 aaKnown RBP16.32■□□□□ 0.2
NIPAL3-203ENST00000358028 PNOCQ13519 176 aa16.32■□□□□ 0.2
NIPAL3-203ENST00000358028 LONRF3Q496Y0 759 aa16.32■□□□□ 0.2
NIPAL3-203ENST00000358028 FAM47AQ5JRC9 791 aa16.32■□□□□ 0.2
NIPAL3-203ENST00000358028 MAP1SQ66K74 1059 aaPredicted RBP16.32■□□□□ 0.2
NIPAL3-203ENST00000358028 METTL16Q86W50 562 aaKnown RBP16.32■□□□□ 0.2
NIPAL3-203ENST00000358028 OGFOD1Q8N543 542 aa16.32■□□□□ 0.2
NIPAL3-203ENST00000358028 ZNF579Q8NAF0 562 aaKnown RBP16.32■□□□□ 0.2
NIPAL3-203ENST00000358028 CNNM3Q8NE01 707 aa16.32■□□□□ 0.2
NIPAL3-203ENST00000358028 CABP5Q9NP86 173 aa16.32■□□□□ 0.2
NIPAL3-203ENST00000358028 HOOK1Q9UJC3 728 aaKnown RBP16.32■□□□□ 0.2
NIPAL3-203ENST00000358028 V9GY48 417 aaPredicted RBP16.32■□□□□ 0.2
NIPAL3-203ENST00000358028 CNTNAP5Q8WYK1 1306 aa16.32■□□□□ 0.2
NIPAL3-203ENST00000358028 NMT2O60551 498 aa16.31■□□□□ 0.2
NIPAL3-203ENST00000358028 GSTO1P78417 241 aa16.31■□□□□ 0.2
NIPAL3-203ENST00000358028 CCZ1BP86790 482 aa16.31■□□□□ 0.2
NIPAL3-203ENST00000358028 CCZ1P86791 482 aaPredicted RBP16.31■□□□□ 0.2
NIPAL3-203ENST00000358028 NCAPHQ15003 741 aa16.31■□□□□ 0.2
NIPAL3-203ENST00000358028 ZNF710Q8N1W2 664 aa16.31■□□□□ 0.2
NIPAL3-203ENST00000358028 CTCFLQ8NI51 663 aaPredicted RBP16.31■□□□□ 0.2
NIPAL3-203ENST00000358028 TBC1D22AQ8WUA7 517 aa16.31■□□□□ 0.2
NIPAL3-203ENST00000358028 C16orf45Q96MC5 204 aaPredicted RBP16.31■□□□□ 0.2
NIPAL3-203ENST00000358028 MCM9Q9NXL9 1143 aa16.31■□□□□ 0.2
NIPAL3-203ENST00000358028 PCDHAC2Q9Y5I4 1007 aa16.31■□□□□ 0.2
NIPAL3-203ENST00000358028 SRPRBQ9Y5M8 271 aaKnown RBP16.31■□□□□ 0.2
NIPAL3-203ENST00000358028 MORC2Q9Y6X9 1032 aaPredicted RBP16.31■□□□□ 0.2
NIPAL3-203ENST00000358028 NRDCO43847 1150 aa16.31■□□□□ 0.2
NIPAL3-203ENST00000358028 GRIN1Q05586 938 aa16.31■□□□□ 0.2
NIPAL3-203ENST00000358028 CREBZFQ9NS37 354 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms