RNA–Protein interactions for RNA: ENST00000357811.7

COL13A1-202, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,991 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-202ENST00000357811 TIAM2Q8IVF5 1701 aa23.15■■□□□ 1.3
COL13A1-202ENST00000357811 DOT1LQ8TEK3 1739 aa23.15■■□□□ 1.3
COL13A1-202ENST00000357811 RPS8P62241 208 aaKnown RBP23.14■■□□□ 1.3
COL13A1-202ENST00000357811 TYW1BQ6NUM6 668 aa23.14■■□□□ 1.3
COL13A1-202ENST00000357811 PARD6BQ9BYG5 372 aa23.14■■□□□ 1.3
COL13A1-202ENST00000357811 TFR2Q9UP52 801 aa23.14■■□□□ 1.3
COL13A1-202ENST00000357811 BCL9LQ86UU0 1499 aa23.14■■□□□ 1.3
COL13A1-202ENST00000357811 RCAN1P53805 252 aa23.14■■□□□ 1.29
COL13A1-202ENST00000357811 DIXDC1Q155Q3 683 aa23.14■■□□□ 1.29
COL13A1-202ENST00000357811 CDKAL1Q5VV42 579 aa23.14■■□□□ 1.29
COL13A1-202ENST00000357811 MFAP3LO75121 409 aa23.13■■□□□ 1.29
COL13A1-202ENST00000357811 NELFBQ8WX92 580 aa23.13■■□□□ 1.29
COL13A1-202ENST00000357811 MTA3Q9BTC8 594 aa23.13■■□□□ 1.29
COL13A1-202ENST00000357811 FAM53CQ9NYF3 392 aa23.13■■□□□ 1.29
COL13A1-202ENST00000357811 SPATA31A1Q5TZJ5 1347 aa23.13■■□□□ 1.29
COL13A1-202ENST00000357811 DZIP1Q86YF9 867 aaKnown RBP23.13■■□□□ 1.29
COL13A1-202ENST00000357811 SRRTQ9BXP5 876 aaKnown RBP23.13■■□□□ 1.29
COL13A1-202ENST00000357811 GYS2P54840 703 aa23.13■■□□□ 1.29
COL13A1-202ENST00000357811 SAP30BPQ9UHR5 308 aaKnown RBP23.13■■□□□ 1.29
COL13A1-202ENST00000357811 STX8Q9UNK0 236 aa23.13■■□□□ 1.29
COL13A1-202ENST00000357811 BCORQ6W2J9 1755 aa23.12■■□□□ 1.29
COL13A1-202ENST00000357811 ZBTB22O15209 634 aa23.12■■□□□ 1.29
COL13A1-202ENST00000357811 CALM1P0DP23 149 aa23.12■■□□□ 1.29
COL13A1-202ENST00000357811 CALM2P0DP24 149 aa23.12■■□□□ 1.29
COL13A1-202ENST00000357811 CALM3P0DP25 149 aa23.12■■□□□ 1.29
COL13A1-202ENST00000357811 PPP2R5BQ15173 497 aa23.12■■□□□ 1.29
COL13A1-202ENST00000357811 E2F4Q16254 413 aa23.12■■□□□ 1.29
COL13A1-202ENST00000357811 KIF4BQ2VIQ3 1234 aa23.12■■□□□ 1.29
COL13A1-202ENST00000357811 RCSD1Q6JBY9 416 aa23.12■■□□□ 1.29
COL13A1-202ENST00000357811 NBPF5PQ86XG9 351 aaPredicted RBP23.12■■□□□ 1.29
COL13A1-202ENST00000357811 GPIHBP1Q8IV16 184 aa23.12■■□□□ 1.29
COL13A1-202ENST00000357811 SLF1Q9BQI6 1058 aa23.12■■□□□ 1.29
COL13A1-202ENST00000357811 KAT14Q9H8E8 782 aa23.12■■□□□ 1.29
COL13A1-202ENST00000357811 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.12■■□□□ 1.29
COL13A1-202ENST00000357811 VGLL3A8MV65 326 aa23.12■■□□□ 1.29
COL13A1-202ENST00000357811 DDAH1O94760 285 aa23.12■■□□□ 1.29
COL13A1-202ENST00000357811 ZRANB2O95218 330 aaKnown RBP eCLIP23.12■■□□□ 1.29
COL13A1-202ENST00000357811 STAT6P42226 847 aa23.12■■□□□ 1.29
COL13A1-202ENST00000357811 HEATR3Q7Z4Q2 680 aa23.12■■□□□ 1.29
COL13A1-202ENST00000357811 GOLGA6L9A6NEM1 432 aa23.11■■□□□ 1.29
COL13A1-202ENST00000357811 PRCPP42785 496 aa23.11■■□□□ 1.29
COL13A1-202ENST00000357811 USP5P45974 858 aa23.11■■□□□ 1.29
COL13A1-202ENST00000357811 INF2Q27J81 1249 aa23.11■■□□□ 1.29
COL13A1-202ENST00000357811 PDXDC2PQ6P474 469 aa23.11■■□□□ 1.29
COL13A1-202ENST00000357811 PANX2Q96RD6 677 aa23.11■■□□□ 1.29
COL13A1-202ENST00000357811 TRIM10Q9UDY6 481 aa23.11■■□□□ 1.29
COL13A1-202ENST00000357811 KIF5CO60282 957 aa23.11■■□□□ 1.29
COL13A1-202ENST00000357811 ERVK-24P63145 666 aa23.11■■□□□ 1.29
COL13A1-202ENST00000357811 GRIK5Q16478 980 aa23.11■■□□□ 1.29
COL13A1-202ENST00000357811 PFKFB3Q16875 520 aaPredicted RBP23.11■■□□□ 1.29
COL13A1-202ENST00000357811 FAM98CQ17RN3 349 aaKnown RBP23.11■■□□□ 1.29
COL13A1-202ENST00000357811 FBXO33Q7Z6M2 555 aa23.11■■□□□ 1.29
COL13A1-202ENST00000357811 TMEM60Q9H2L4 133 aa23.11■■□□□ 1.29
COL13A1-202ENST00000357811 ARAP2Q8WZ64 1704 aa23.11■■□□□ 1.29
COL13A1-202ENST00000357811 PAK1Q13153 545 aa23.1■■□□□ 1.29
COL13A1-202ENST00000357811 SF3B3Q15393 1217 aaKnown RBP23.1■■□□□ 1.29
COL13A1-202ENST00000357811 SLC35F6Q8N357 371 aa23.1■■□□□ 1.29
COL13A1-202ENST00000357811 IL17RBQ9NRM6 502 aa23.1■■□□□ 1.29
COL13A1-202ENST00000357811 RNF216Q9NWF9 866 aaPredicted RBP23.1■■□□□ 1.29
COL13A1-202ENST00000357811 PMS1P54277 932 aaKnown RBP23.1■■□□□ 1.29
COL13A1-202ENST00000357811 UBXN1Q04323 297 aa23.1■■□□□ 1.29
COL13A1-202ENST00000357811 PNMA1Q8ND90 353 aa23.1■■□□□ 1.29
COL13A1-202ENST00000357811 CHP1Q99653 195 aa23.1■■□□□ 1.29
COL13A1-202ENST00000357811 DUOX1Q9NRD9 1551 aa23.1■■□□□ 1.29
COL13A1-202ENST00000357811 KCNJ18B7U540 433 aa23.1■■□□□ 1.29
COL13A1-202ENST00000357811 RPN1P04843 607 aaKnown RBP23.1■■□□□ 1.29
COL13A1-202ENST00000357811 PBX1P40424 430 aa23.1■■□□□ 1.29
COL13A1-202ENST00000357811 CACNA1SQ13698 1873 aa23.1■■□□□ 1.29
COL13A1-202ENST00000357811 KCNJ12Q14500 433 aa23.1■■□□□ 1.29
COL13A1-202ENST00000357811 CC2D1AQ6P1N0 951 aaPredicted RBP23.1■■□□□ 1.29
COL13A1-202ENST00000357811 MKNK2Q9HBH9 465 aa23.1■■□□□ 1.29
COL13A1-202ENST00000357811 RHOXF2BP0C7M4 288 aa23.09■■□□□ 1.29
COL13A1-202ENST00000357811 KRT9P35527 623 aa23.09■■□□□ 1.29
COL13A1-202ENST00000357811 BLIDQ8IZY5 108 aa23.09■■□□□ 1.29
COL13A1-202ENST00000357811 NLRP3Q96P20 1036 aa23.09■■□□□ 1.29
COL13A1-202ENST00000357811 RHOXF2Q9BQY4 288 aa23.09■■□□□ 1.29
COL13A1-202ENST00000357811 TBC1D8O95759 1140 aa23.09■■□□□ 1.29
COL13A1-202ENST00000357811 COPB1P53618 953 aaKnown RBP23.09■■□□□ 1.29
COL13A1-202ENST00000357811 BMP15O95972 392 aa23.08■■□□□ 1.29
COL13A1-202ENST00000357811 SH3RF3Q8TEJ3 882 aaPredicted RBP23.08■■□□□ 1.29
COL13A1-202ENST00000357811 CTAGE1Q96RT6 745 aa23.08■■□□□ 1.29
COL13A1-202ENST00000357811 VAT1LQ9HCJ6 419 aa23.08■■□□□ 1.29
COL13A1-202ENST00000357811 ANKIB1Q9P2G1 1089 aa23.08■■□□□ 1.29
COL13A1-202ENST00000357811 NHSL1Q5SYE7 1610 aa23.08■■□□□ 1.29
COL13A1-202ENST00000357811 STRCQ7RTU9 1775 aa23.08■■□□□ 1.29
COL13A1-202ENST00000357811 CHMP4BP1P59074 171 aa23.08■■□□□ 1.29
COL13A1-202ENST00000357811 WWC2Q6AWC2 1192 aa23.08■■□□□ 1.29
COL13A1-202ENST00000357811 AMIGO3Q86WK7 504 aa23.08■■□□□ 1.29
COL13A1-202ENST00000357811 SETDB2Q96T68 719 aa23.08■■□□□ 1.29
COL13A1-202ENST00000357811 SUGCTQ9HAC7 445 aa23.08■■□□□ 1.29
COL13A1-202ENST00000357811 CCDC194A0A1B0GVG4 234 aa23.07■■□□□ 1.28
COL13A1-202ENST00000357811 TPM1P09493 284 aa23.07■■□□□ 1.28
COL13A1-202ENST00000357811 GOLGA1Q92805 767 aa23.07■■□□□ 1.28
COL13A1-202ENST00000357811 ERCC3P19447 782 aa23.07■■□□□ 1.28
COL13A1-202ENST00000357811 MAPK8IP2Q13387 824 aaPredicted RBP23.07■■□□□ 1.28
COL13A1-202ENST00000357811 TCP11X2Q5H9J9 407 aa23.07■■□□□ 1.28
COL13A1-202ENST00000357811 TGFBRAP1Q8WUH2 860 aa23.07■■□□□ 1.28
COL13A1-202ENST00000357811 SLC35G1Q2M3R5 365 aa23.07■■□□□ 1.28
COL13A1-202ENST00000357811 RSRC2Q7L4I2 434 aaKnown RBP23.07■■□□□ 1.28
COL13A1-202ENST00000357811 MAPKAPK5Q8IW41 473 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms