RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 SPDL1Q96EA4 605 aa14.1□□□□□ -0.15
SMC4-202ENST00000357388 PLIN2Q99541 437 aa14.1□□□□□ -0.15
SMC4-202ENST00000357388 TSC22D3Q99576 134 aa14.1□□□□□ -0.15
SMC4-202ENST00000357388 ANKFY1Q9P2R3 1169 aa14.1□□□□□ -0.15
SMC4-202ENST00000357388 PACSIN2Q9UNF0 486 aaPredicted RBP14.1□□□□□ -0.15
SMC4-202ENST00000357388 PPIP5K1Q6PFW1 1433 aa14.1□□□□□ -0.15
SMC4-202ENST00000357388 ZMYM3Q14202 1370 aa14.09□□□□□ -0.15
SMC4-202ENST00000357388 MUM1L1Q5H9M0 696 aa14.09□□□□□ -0.15
SMC4-202ENST00000357388 LRRC43Q8N309 656 aa14.09□□□□□ -0.15
SMC4-202ENST00000357388 SEPT8Q92599 483 aa14.09□□□□□ -0.15
SMC4-202ENST00000357388 SLC27A2O14975 620 aa14.09□□□□□ -0.15
SMC4-202ENST00000357388 GABPAQ06546 454 aa14.09□□□□□ -0.15
SMC4-202ENST00000357388 LRRC8AQ8IWT6 810 aa14.09□□□□□ -0.15
SMC4-202ENST00000357388 CCDC87Q9NVE4 849 aa14.09□□□□□ -0.15
SMC4-202ENST00000357388 CDC23Q9UJX2 597 aa14.09□□□□□ -0.15
SMC4-202ENST00000357388 PHLPP2Q6ZVD8 1323 aa14.09□□□□□ -0.15
SMC4-202ENST00000357388 SH3TC1Q8TE82 1336 aa14.09□□□□□ -0.15
SMC4-202ENST00000357388 EIF3CLB5ME19 914 aaKnown RBP14.09□□□□□ -0.15
SMC4-202ENST00000357388 KIF22Q14807 665 aa14.09□□□□□ -0.15
SMC4-202ENST00000357388 JADE1Q6IE81 842 aa14.09□□□□□ -0.15
SMC4-202ENST00000357388 EIF3CQ99613 913 aaKnown RBP14.09□□□□□ -0.15
SMC4-202ENST00000357388 PKD2L1Q9P0L9 805 aa14.09□□□□□ -0.15
SMC4-202ENST00000357388 SATB2Q9UPW6 733 aa14.09□□□□□ -0.15
SMC4-202ENST00000357388 KIF1CO43896 1103 aaKnown RBP14.09□□□□□ -0.15
SMC4-202ENST00000357388 IFT88Q13099 833 aa14.09□□□□□ -0.15
SMC4-202ENST00000357388 TYW1BQ6NUM6 668 aa14.09□□□□□ -0.15
SMC4-202ENST00000357388 N4BP2L2Q92802 583 aaPredicted RBP14.09□□□□□ -0.15
SMC4-202ENST00000357388 LZTS2Q9BRK4 669 aa14.09□□□□□ -0.15
SMC4-202ENST00000357388 ADCY8P40145 1251 aa14.08□□□□□ -0.15
SMC4-202ENST00000357388 SPOUT1Q5T280 376 aaKnown RBP14.08□□□□□ -0.15
SMC4-202ENST00000357388 NXNQ6DKJ4 435 aa14.08□□□□□ -0.15
SMC4-202ENST00000357388 GPCPD1Q9NPB8 672 aa14.08□□□□□ -0.15
SMC4-202ENST00000357388 POLR3AO14802 1390 aaPredicted RBP14.08□□□□□ -0.15
SMC4-202ENST00000357388 LMTK3Q96Q04 1460 aa14.08□□□□□ -0.15
SMC4-202ENST00000357388 MBD4O95243 580 aa14.08□□□□□ -0.16
SMC4-202ENST00000357388 RPSAP08865 295 aaKnown RBP14.08□□□□□ -0.16
SMC4-202ENST00000357388 P4HA1P13674 534 aa14.08□□□□□ -0.16
SMC4-202ENST00000357388 ASPHQ12797 758 aa14.08□□□□□ -0.16
SMC4-202ENST00000357388 TMED1Q13445 227 aa14.08□□□□□ -0.16
SMC4-202ENST00000357388 TMTC3Q6ZXV5 915 aa14.08□□□□□ -0.16
SMC4-202ENST00000357388 RRAGAQ7L523 313 aa14.08□□□□□ -0.16
SMC4-202ENST00000357388 MAP3K5Q99683 1374 aa14.08□□□□□ -0.16
SMC4-202ENST00000357388 KCNK3O14649 394 aa14.08□□□□□ -0.16
SMC4-202ENST00000357388 N4BP1O75113 896 aaKnown RBP14.08□□□□□ -0.16
SMC4-202ENST00000357388 DPP8Q6V1X1 898 aaPredicted RBP14.08□□□□□ -0.16
SMC4-202ENST00000357388 RIOK1Q9BRS2 568 aaKnown RBP14.08□□□□□ -0.16
SMC4-202ENST00000357388 FGFR1OP2Q9NVK5 253 aa14.08□□□□□ -0.16
SMC4-202ENST00000357388 FRMD3A2A2Y4 597 aa14.08□□□□□ -0.16
SMC4-202ENST00000357388 ATF2P15336 505 aa14.08□□□□□ -0.16
SMC4-202ENST00000357388 STAT1P42224 750 aa14.08□□□□□ -0.16
SMC4-202ENST00000357388 LONRF3Q496Y0 759 aa14.08□□□□□ -0.16
SMC4-202ENST00000357388 ADALQ6DHV7 355 aa14.08□□□□□ -0.16
SMC4-202ENST00000357388 MMS22LQ6ZRQ5 1243 aa14.08□□□□□ -0.16
SMC4-202ENST00000357388 NME8Q8N427 588 aa14.08□□□□□ -0.16
SMC4-202ENST00000357388 YY1AP1Q9H869 796 aa14.08□□□□□ -0.16
SMC4-202ENST00000357388 ANGEL1Q9UNK9 670 aaKnown RBP14.08□□□□□ -0.16
SMC4-202ENST00000357388 RPRD2Q5VT52 1461 aaKnown RBP14.08□□□□□ -0.16
SMC4-202ENST00000357388 PFDN6O15212 129 aa14.08□□□□□ -0.16
SMC4-202ENST00000357388 NR1I2O75469 434 aa14.08□□□□□ -0.16
SMC4-202ENST00000357388 PUM3Q15397 648 aaKnown RBP14.08□□□□□ -0.16
SMC4-202ENST00000357388 RSBN1LQ6PCB5 846 aaPredicted RBP14.08□□□□□ -0.16
SMC4-202ENST00000357388 ARHGEF18Q6ZSZ5 1173 aa14.08□□□□□ -0.16
SMC4-202ENST00000357388 DIS3L2Q8IYB7 885 aaKnown RBP14.08□□□□□ -0.16
SMC4-202ENST00000357388 PROCA1Q8NCQ7 364 aaPredicted RBP14.08□□□□□ -0.16
SMC4-202ENST00000357388 KIFC3Q9BVG8 833 aa14.08□□□□□ -0.16
SMC4-202ENST00000357388 MRPL46Q9H2W6 279 aaKnown RBP14.08□□□□□ -0.16
SMC4-202ENST00000357388 RNF14Q9UBS8 474 aa14.08□□□□□ -0.16
SMC4-202ENST00000357388 USTQ9Y2C2 406 aa14.08□□□□□ -0.16
SMC4-202ENST00000357388 SNX14Q9Y5W7 946 aa14.08□□□□□ -0.16
SMC4-202ENST00000357388 BRD1O95696 1058 aa14.07□□□□□ -0.16
SMC4-202ENST00000357388 GUCY2CP25092 1073 aa14.07□□□□□ -0.16
SMC4-202ENST00000357388 POLE2P56282 527 aa14.07□□□□□ -0.16
SMC4-202ENST00000357388 MMEL1Q495T6 779 aa14.07□□□□□ -0.16
SMC4-202ENST00000357388 KLHL29Q96CT2 875 aa14.07□□□□□ -0.16
SMC4-202ENST00000357388 PALM3A6NDB9 673 aaPredicted RBP14.07□□□□□ -0.16
SMC4-202ENST00000357388 CDKL2Q92772 493 aa14.07□□□□□ -0.16
SMC4-202ENST00000357388 TEKT1Q969V4 418 aa14.07□□□□□ -0.16
SMC4-202ENST00000357388 IWS1Q96ST2 819 aa14.07□□□□□ -0.16
SMC4-202ENST00000357388 NOP53Q9NZM5 478 aaKnown RBP14.07□□□□□ -0.16
SMC4-202ENST00000357388 SYNJ1O43426 1573 aa14.07□□□□□ -0.16
SMC4-202ENST00000357388 EEF1DP29692 281 aaKnown RBP14.07□□□□□ -0.16
SMC4-202ENST00000357388 TFCP2Q12800 502 aa14.07□□□□□ -0.16
SMC4-202ENST00000357388 ARHGEF6Q15052 776 aa14.07□□□□□ -0.16
SMC4-202ENST00000357388 HADHQ16836 314 aaKnown RBP14.07□□□□□ -0.16
SMC4-202ENST00000357388 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.07□□□□□ -0.16
SMC4-202ENST00000357388 CCDC92Q53HC0 331 aaPredicted RBP14.07□□□□□ -0.16
SMC4-202ENST00000357388 C2CD5Q86YS7 1000 aa14.07□□□□□ -0.16
SMC4-202ENST00000357388 NIM1KQ8IY84 436 aa14.07□□□□□ -0.16
SMC4-202ENST00000357388 ANKRD35Q8N283 1001 aa14.07□□□□□ -0.16
SMC4-202ENST00000357388 GINS2Q9Y248 185 aa14.07□□□□□ -0.16
SMC4-202ENST00000357388 NBPF9Q3BBW0 867 aa14.07□□□□□ -0.16
SMC4-202ENST00000357388 PIK3AP1Q6ZUJ8 805 aa14.07□□□□□ -0.16
SMC4-202ENST00000357388 PSPC1Q8WXF1 523 aaKnown RBP14.07□□□□□ -0.16
SMC4-202ENST00000357388 SAAL1Q96ER3 474 aa14.07□□□□□ -0.16
SMC4-202ENST00000357388 CCDC138Q96M89 665 aa14.07□□□□□ -0.16
SMC4-202ENST00000357388 PSMB7Q99436 277 aa14.07□□□□□ -0.16
SMC4-202ENST00000357388 MIS12Q9H081 205 aa14.07□□□□□ -0.16
SMC4-202ENST00000357388 CD2APQ9Y5K6 639 aa14.07□□□□□ -0.16
SMC4-202ENST00000357388 MAGEA9P43362 315 aa14.06□□□□□ -0.16
SMC4-202ENST00000357388 RBM6P78332 1123 aaKnown RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms