RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 EIF6P56537 245 aaKnown RBP17.27■□□□□ 0.36
TRAPPC11-202ENST00000357207 INF2Q27J81 1249 aa17.27■□□□□ 0.36
TRAPPC11-202ENST00000357207 CCDC105Q8IYK2 499 aa17.27■□□□□ 0.36
TRAPPC11-202ENST00000357207 WDR66Q8TBY9 1149 aa17.27■□□□□ 0.36
TRAPPC11-202ENST00000357207 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.27■□□□□ 0.36
TRAPPC11-202ENST00000357207 MED23Q9ULK4 1368 aa17.27■□□□□ 0.36
TRAPPC11-202ENST00000357207 SCG2P13521 617 aa17.27■□□□□ 0.35
TRAPPC11-202ENST00000357207 CLUL1Q15846 466 aa17.27■□□□□ 0.35
TRAPPC11-202ENST00000357207 DENND2CQ68D51 928 aa17.27■□□□□ 0.35
TRAPPC11-202ENST00000357207 MYOCDQ8IZQ8 938 aa17.27■□□□□ 0.35
TRAPPC11-202ENST00000357207 AMFRQ9UKV5 643 aa17.27■□□□□ 0.35
TRAPPC11-202ENST00000357207 ZBTB21Q9ULJ3 1066 aa17.27■□□□□ 0.35
TRAPPC11-202ENST00000357207 SMCO2A6NFE2 343 aa17.26■□□□□ 0.35
TRAPPC11-202ENST00000357207 RGS16O15492 202 aaPredicted RBP17.26■□□□□ 0.35
TRAPPC11-202ENST00000357207 BUB1O43683 1085 aa17.26■□□□□ 0.35
TRAPPC11-202ENST00000357207 GNA14O95837 355 aa17.26■□□□□ 0.35
TRAPPC11-202ENST00000357207 APBA1Q02410 837 aa17.26■□□□□ 0.35
TRAPPC11-202ENST00000357207 CPSF1Q10570 1443 aaKnown RBP17.26■□□□□ 0.35
TRAPPC11-202ENST00000357207 CYP2E1P05181 493 aaPredicted RBP17.26■□□□□ 0.35
TRAPPC11-202ENST00000357207 PHKG2P15735 406 aa17.26■□□□□ 0.35
TRAPPC11-202ENST00000357207 PGBD1Q96JS3 809 aa17.26■□□□□ 0.35
TRAPPC11-202ENST00000357207 TUBGCP2Q9BSJ2 902 aa17.26■□□□□ 0.35
TRAPPC11-202ENST00000357207 LSM14BQ9BX40 385 aaKnown RBP17.26■□□□□ 0.35
TRAPPC11-202ENST00000357207 PUS3Q9BZE2 481 aaKnown RBP17.26■□□□□ 0.35
TRAPPC11-202ENST00000357207 SAMSN1Q9NSI8 373 aaKnown RBP17.26■□□□□ 0.35
TRAPPC11-202ENST00000357207 RNF40O75150 1001 aa17.25■□□□□ 0.35
TRAPPC11-202ENST00000357207 SLFN14P0C7P3 912 aa17.25■□□□□ 0.35
TRAPPC11-202ENST00000357207 KRT5P13647 590 aa17.25■□□□□ 0.35
TRAPPC11-202ENST00000357207 HNRNPH2P55795 449 aaKnown RBP17.25■□□□□ 0.35
TRAPPC11-202ENST00000357207 CTSWP56202 376 aa17.25■□□□□ 0.35
TRAPPC11-202ENST00000357207 GKAP1Q5VSY0 366 aaPredicted RBP17.25■□□□□ 0.35
TRAPPC11-202ENST00000357207 NCAPH2Q6IBW4 605 aa17.25■□□□□ 0.35
TRAPPC11-202ENST00000357207 NT5C3AQ9H0P0 336 aa17.25■□□□□ 0.35
TRAPPC11-202ENST00000357207 MAN1B1Q9UKM7 699 aa17.25■□□□□ 0.35
TRAPPC11-202ENST00000357207 ATP7BP35670 1465 aa17.25■□□□□ 0.35
TRAPPC11-202ENST00000357207 KRIT1O00522 736 aa17.25■□□□□ 0.35
TRAPPC11-202ENST00000357207 LONP1P36776 959 aaKnown RBP17.25■□□□□ 0.35
TRAPPC11-202ENST00000357207 STAT1P42224 750 aa17.25■□□□□ 0.35
TRAPPC11-202ENST00000357207 SDR42E1Q8WUS8 393 aa17.25■□□□□ 0.35
TRAPPC11-202ENST00000357207 RTCBQ9Y3I0 505 aaKnown RBP17.25■□□□□ 0.35
TRAPPC11-202ENST00000357207 PBRM1Q86U86 1689 aa17.25■□□□□ 0.35
TRAPPC11-202ENST00000357207 PPP2R5EQ16537 467 aa17.25■□□□□ 0.35
TRAPPC11-202ENST00000357207 FYB2Q5VWT5 728 aa17.25■□□□□ 0.35
TRAPPC11-202ENST00000357207 TFCP2L1Q9NZI6 479 aa17.25■□□□□ 0.35
TRAPPC11-202ENST00000357207 PCCAP05165 728 aaPredicted RBP17.24■□□□□ 0.35
TRAPPC11-202ENST00000357207 ADORA1P30542 326 aa17.24■□□□□ 0.35
TRAPPC11-202ENST00000357207 GUCY2DQ02846 1103 aa17.24■□□□□ 0.35
TRAPPC11-202ENST00000357207 RNF26Q9BY78 433 aaPredicted RBP17.24■□□□□ 0.35
TRAPPC11-202ENST00000357207 EXOC3O60645 756 aa17.24■□□□□ 0.35
TRAPPC11-202ENST00000357207 NEDD9Q14511 834 aa17.24■□□□□ 0.35
TRAPPC11-202ENST00000357207 NAA30Q147X3 362 aaPredicted RBP17.24■□□□□ 0.35
TRAPPC11-202ENST00000357207 PPP1R12CQ9BZL4 782 aa17.24■□□□□ 0.35
TRAPPC11-202ENST00000357207 CHMP2AO43633 222 aa17.24■□□□□ 0.35
TRAPPC11-202ENST00000357207 EEF1GP26641 437 aaKnown RBP17.24■□□□□ 0.35
TRAPPC11-202ENST00000357207 BIRC3Q13489 604 aa17.24■□□□□ 0.35
TRAPPC11-202ENST00000357207 UAP1Q16222 522 aaPredicted RBP17.24■□□□□ 0.35
TRAPPC11-202ENST00000357207 CERS3Q8IU89 383 aa17.24■□□□□ 0.35
TRAPPC11-202ENST00000357207 SMYD4Q8IYR2 804 aaPredicted RBP17.24■□□□□ 0.35
TRAPPC11-202ENST00000357207 MRRFQ96E11 262 aaKnown RBP17.24■□□□□ 0.35
TRAPPC11-202ENST00000357207 TXNDC16Q9P2K2 825 aa17.24■□□□□ 0.35
TRAPPC11-202ENST00000357207 TECP42680 631 aa17.24■□□□□ 0.35
TRAPPC11-202ENST00000357207 KCTD16Q68DU8 428 aa17.24■□□□□ 0.35
TRAPPC11-202ENST00000357207 GRAMD1CQ8IYS0 662 aa17.24■□□□□ 0.35
TRAPPC11-202ENST00000357207 ZBTB38Q8NAP3 1195 aaPredicted RBP17.24■□□□□ 0.35
TRAPPC11-202ENST00000357207 HOMER3Q9NSC5 361 aa17.24■□□□□ 0.35
TRAPPC11-202ENST00000357207 SOWAHDA6NJG2 315 aa17.23■□□□□ 0.35
TRAPPC11-202ENST00000357207 ZMYND10O75800 440 aa17.23■□□□□ 0.35
TRAPPC11-202ENST00000357207 OR52Z1P0C646 297 aa17.23■□□□□ 0.35
TRAPPC11-202ENST00000357207 SLFNL1Q499Z3 407 aa17.23■□□□□ 0.35
TRAPPC11-202ENST00000357207 PNMA1Q8ND90 353 aa17.23■□□□□ 0.35
TRAPPC11-202ENST00000357207 U2AF1L4Q8WU68 220 aaKnown RBP17.23■□□□□ 0.35
TRAPPC11-202ENST00000357207 ARPP21Q9UBL0 812 aaPredicted RBP17.23■□□□□ 0.35
TRAPPC11-202ENST00000357207 PCDHB13Q9Y5F0 798 aa17.23■□□□□ 0.35
TRAPPC11-202ENST00000357207 ARHGEF35A5YM69 484 aa17.23■□□□□ 0.35
TRAPPC11-202ENST00000357207 COBLO75128 1261 aa17.23■□□□□ 0.35
TRAPPC11-202ENST00000357207 BCRP11274 1271 aa17.23■□□□□ 0.35
TRAPPC11-202ENST00000357207 XRCC5P13010 732 aaKnown RBP17.23■□□□□ 0.35
TRAPPC11-202ENST00000357207 WDR44Q5JSH3 913 aa17.23■□□□□ 0.35
TRAPPC11-202ENST00000357207 MSANTD4Q8NCY6 345 aa17.23■□□□□ 0.35
TRAPPC11-202ENST00000357207 ACRBPQ8NEB7 543 aa17.23■□□□□ 0.35
TRAPPC11-202ENST00000357207 FNBP1Q96RU3 617 aa17.23■□□□□ 0.35
TRAPPC11-202ENST00000357207 PARP2Q9UGN5 583 aa17.23■□□□□ 0.35
TRAPPC11-202ENST00000357207 ARMCX3Q9UH62 379 aaPredicted RBP17.23■□□□□ 0.35
TRAPPC11-202ENST00000357207 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.23■□□□□ 0.35
TRAPPC11-202ENST00000357207 UGGT1Q9NYU2 1555 aa17.23■□□□□ 0.35
TRAPPC11-202ENST00000357207 ERVV-2B6SEH9 535 aa17.23■□□□□ 0.35
TRAPPC11-202ENST00000357207 GCNT3O95395 438 aa17.23■□□□□ 0.35
TRAPPC11-202ENST00000357207 GBP1P32455 592 aa17.23■□□□□ 0.35
TRAPPC11-202ENST00000357207 TSNAXIP1Q2TAA8 658 aa17.23■□□□□ 0.35
TRAPPC11-202ENST00000357207 PLA2G4DQ86XP0 818 aa17.23■□□□□ 0.35
TRAPPC11-202ENST00000357207 OGFOD1Q8N543 542 aa17.23■□□□□ 0.35
TRAPPC11-202ENST00000357207 OSBP2Q969R2 916 aa17.23■□□□□ 0.35
TRAPPC11-202ENST00000357207 SLC39A2Q9NP94 309 aa17.23■□□□□ 0.35
TRAPPC11-202ENST00000357207 TMEM2Q9UHN6 1383 aa17.23■□□□□ 0.35
TRAPPC11-202ENST00000357207 PDE8BO95263 885 aa17.22■□□□□ 0.35
TRAPPC11-202ENST00000357207 FMNL1O95466 1100 aaPredicted RBP17.22■□□□□ 0.35
TRAPPC11-202ENST00000357207 H2AFZP0C0S5 128 aa17.22■□□□□ 0.35
TRAPPC11-202ENST00000357207 IFNAR1P17181 557 aa17.22■□□□□ 0.35
TRAPPC11-202ENST00000357207 PHKA1P46020 1223 aa17.22■□□□□ 0.35
TRAPPC11-202ENST00000357207 PTPN12Q05209 780 aaKnown RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms