RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 CCDC89Q8N998 374 aa7.23□□□□□ -1.25
VPS13B-202ENST00000357162 PI4KAP2A4QPH2 592 aa7.22□□□□□ -1.25
VPS13B-202ENST00000357162 TMEM132EQ6IEE7 984 aa7.22□□□□□ -1.25
VPS13B-202ENST00000357162 TEX9Q8N6V9 391 aa7.22□□□□□ -1.25
VPS13B-202ENST00000357162 PI4KAP1Q8N8J0 262 aa7.22□□□□□ -1.25
VPS13B-202ENST00000357162 ARHGEF2Q92974 986 aaKnown RBP7.22□□□□□ -1.25
VPS13B-202ENST00000357162 GDPD2Q9HCC8 539 aa7.22□□□□□ -1.25
VPS13B-202ENST00000357162 RIPOR2Q9Y4F9 1068 aa7.22□□□□□ -1.25
VPS13B-202ENST00000357162 ABCC1P33527 1531 aa7.22□□□□□ -1.25
VPS13B-202ENST00000357162 KIAA0556O60303 1618 aa7.22□□□□□ -1.25
VPS13B-202ENST00000357162 TMEM232C9JQI7 657 aa7.22□□□□□ -1.25
VPS13B-202ENST00000357162 E7EVH7 732 aa7.22□□□□□ -1.25
VPS13B-202ENST00000357162 CDAN1Q8IWY9 1227 aa7.22□□□□□ -1.25
VPS13B-202ENST00000357162 AMFRQ9UKV5 643 aa7.22□□□□□ -1.25
VPS13B-202ENST00000357162 MYOM2P54296 1465 aa7.22□□□□□ -1.25
VPS13B-202ENST00000357162 KDM5CP41229 1560 aa7.22□□□□□ -1.25
VPS13B-202ENST00000357162 IFT81Q8WYA0 676 aa7.22□□□□□ -1.25
VPS13B-202ENST00000357162 PDZD4Q76G19 769 aaPredicted RBP7.22□□□□□ -1.25
VPS13B-202ENST00000357162 KCNK9Q9NPC2 374 aa7.22□□□□□ -1.25
VPS13B-202ENST00000357162 POTEB3A0JP26 581 aa7.22□□□□□ -1.25
VPS13B-202ENST00000357162 SMIM24O75264 130 aa7.22□□□□□ -1.25
VPS13B-202ENST00000357162 POTEBQ6S5H4 581 aa7.22□□□□□ -1.25
VPS13B-202ENST00000357162 ADGRL3Q9HAR2 1447 aa7.22□□□□□ -1.25
VPS13B-202ENST00000357162 SPDYE3A6NKU9 549 aa7.22□□□□□ -1.25
VPS13B-202ENST00000357162 GOLGA8CPA6NN73 597 aa7.22□□□□□ -1.25
VPS13B-202ENST00000357162 UBA5Q9GZZ9 404 aa7.22□□□□□ -1.25
VPS13B-202ENST00000357162 TMOD3Q9NYL9 352 aa7.22□□□□□ -1.25
VPS13B-202ENST00000357162 NOS1P29475 1434 aa7.22□□□□□ -1.25
VPS13B-202ENST00000357162 VAMP4O75379 141 aa7.22□□□□□ -1.25
VPS13B-202ENST00000357162 HSPA1LP34931 641 aa7.22□□□□□ -1.25
VPS13B-202ENST00000357162 AFAP1Q8N556 730 aa7.22□□□□□ -1.25
VPS13B-202ENST00000357162 STAP2Q9UGK3 403 aa7.22□□□□□ -1.25
VPS13B-202ENST00000357162 FAM13AO94988 1023 aa7.22□□□□□ -1.25
VPS13B-202ENST00000357162 ADCY2Q08462 1091 aa7.22□□□□□ -1.25
VPS13B-202ENST00000357162 ATP2B3Q16720 1220 aa7.22□□□□□ -1.25
VPS13B-202ENST00000357162 C6orf118Q5T5N4 469 aa7.22□□□□□ -1.25
VPS13B-202ENST00000357162 MYSM1Q5VVJ2 828 aa7.22□□□□□ -1.25
VPS13B-202ENST00000357162 FOXP3Q9BZS1 431 aa7.22□□□□□ -1.25
VPS13B-202ENST00000357162 PPP1R12AO14974 1030 aaPredicted RBP7.22□□□□□ -1.25
VPS13B-202ENST00000357162 NOSTRINQ8IVI9 506 aa7.22□□□□□ -1.25
VPS13B-202ENST00000357162 ST13P4Q8IZP2 240 aaPredicted RBP7.22□□□□□ -1.25
VPS13B-202ENST00000357162 ANKRD35Q8N283 1001 aa7.22□□□□□ -1.25
VPS13B-202ENST00000357162 DRC1Q96MC2 740 aa7.22□□□□□ -1.25
VPS13B-202ENST00000357162 FAM169AQ9Y6X4 670 aa7.22□□□□□ -1.25
VPS13B-202ENST00000357162 XRCC5P13010 732 aaKnown RBP7.22□□□□□ -1.25
VPS13B-202ENST00000357162 TTC19Q6DKK2 380 aaPredicted RBP7.22□□□□□ -1.25
VPS13B-202ENST00000357162 HACD3Q9P035 362 aa7.22□□□□□ -1.25
VPS13B-202ENST00000357162 STK17AQ9UEE5 414 aa7.22□□□□□ -1.25
VPS13B-202ENST00000357162 GTPBP6O43824 516 aaPredicted RBP7.22□□□□□ -1.25
VPS13B-202ENST00000357162 AOC3Q16853 763 aa7.22□□□□□ -1.25
VPS13B-202ENST00000357162 SND1Q7KZF4 910 aaKnown RBP eCLIP7.22□□□□□ -1.25
VPS13B-202ENST00000357162 WAPLQ7Z5K2 1190 aa7.22□□□□□ -1.25
VPS13B-202ENST00000357162 FOXP1Q9H334 677 aaPredicted RBP7.22□□□□□ -1.25
VPS13B-202ENST00000357162 SERPINI1Q99574 410 aa7.21□□□□□ -1.25
VPS13B-202ENST00000357162 ZNF277Q9NRM2 450 aaPredicted RBP7.21□□□□□ -1.25
VPS13B-202ENST00000357162 SVILO95425 2214 aa7.21□□□□□ -1.25
VPS13B-202ENST00000357162 PLCH2O75038 1416 aa7.21□□□□□ -1.25
VPS13B-202ENST00000357162 TRAF5O00463 557 aa7.21□□□□□ -1.25
VPS13B-202ENST00000357162 HNRNPRO43390 633 aaKnown RBP7.21□□□□□ -1.25
VPS13B-202ENST00000357162 CCT2P78371 535 aaKnown RBP7.21□□□□□ -1.25
VPS13B-202ENST00000357162 TEX2Q8IWB9 1127 aa7.21□□□□□ -1.25
VPS13B-202ENST00000357162 CCDC144CPQ8IYA2 1237 aa7.21□□□□□ -1.25
VPS13B-202ENST00000357162 CASP14P31944 242 aa7.21□□□□□ -1.25
VPS13B-202ENST00000357162 STAT1P42224 750 aa7.21□□□□□ -1.25
VPS13B-202ENST00000357162 RASIP1Q5U651 963 aa7.21□□□□□ -1.25
VPS13B-202ENST00000357162 CCDC63Q8NA47 563 aa7.21□□□□□ -1.25
VPS13B-202ENST00000357162 TRERF1Q96PN7 1200 aa7.21□□□□□ -1.25
VPS13B-202ENST00000357162 PSMD1Q99460 953 aa7.21□□□□□ -1.25
VPS13B-202ENST00000357162 CARD6Q9BX69 1037 aa7.21□□□□□ -1.25
VPS13B-202ENST00000357162 RFC1P35251 1148 aaPredicted RBP7.21□□□□□ -1.25
VPS13B-202ENST00000357162 PAIP2BQ9ULR5 123 aaKnown RBP7.21□□□□□ -1.25
VPS13B-202ENST00000357162 ORC6Q9Y5N6 252 aa7.21□□□□□ -1.25
VPS13B-202ENST00000357162 COMMD10Q9Y6G5 202 aa7.21□□□□□ -1.25
VPS13B-202ENST00000357162 EPN1Q9Y6I3 576 aaPredicted RBP7.21□□□□□ -1.25
VPS13B-202ENST00000357162 GRID2IPA4D2P6 1211 aa7.21□□□□□ -1.26
VPS13B-202ENST00000357162 PGRMC1O00264 195 aaKnown RBP7.21□□□□□ -1.26
VPS13B-202ENST00000357162 RAPGEF1Q13905 1077 aa7.21□□□□□ -1.26
VPS13B-202ENST00000357162 KBTBD3Q8NAB2 608 aa7.21□□□□□ -1.26
VPS13B-202ENST00000357162 NLRP7Q8WX94 980 aa7.21□□□□□ -1.26
VPS13B-202ENST00000357162 MAP3K2Q9Y2U5 619 aa7.21□□□□□ -1.26
VPS13B-202ENST00000357162 CROCC2H7BZ55 1655 aa7.21□□□□□ -1.26
VPS13B-202ENST00000357162 GNGT1P63211 74 aa7.21□□□□□ -1.26
VPS13B-202ENST00000357162 SYTL4Q96C24 671 aaPredicted RBP7.21□□□□□ -1.26
VPS13B-202ENST00000357162 ANGPTL3Q9Y5C1 460 aa7.21□□□□□ -1.26
VPS13B-202ENST00000357162 ZDBF2Q9HCK1 2354 aa7.21□□□□□ -1.26
VPS13B-202ENST00000357162 PFKFB2O60825 505 aa7.21□□□□□ -1.26
VPS13B-202ENST00000357162 U2AF2P26368 475 aaKnown RBP eCLIP7.21□□□□□ -1.261e-6■■■■□ 25.1
VPS13B-202ENST00000357162 GRAMD1AQ96CP6 724 aa7.21□□□□□ -1.26
VPS13B-202ENST00000357162 SAAL1Q96ER3 474 aa7.21□□□□□ -1.26
VPS13B-202ENST00000357162 SENP3Q9H4L4 574 aaPredicted RBP7.21□□□□□ -1.26
VPS13B-202ENST00000357162 ESPL1Q14674 2120 aa7.21□□□□□ -1.26
VPS13B-202ENST00000357162 TERB1Q8NA31 727 aa7.21□□□□□ -1.26
VPS13B-202ENST00000357162 MAN1A2O60476 641 aa7.21□□□□□ -1.26
VPS13B-202ENST00000357162 PPP6R2O75170 966 aa7.21□□□□□ -1.26
VPS13B-202ENST00000357162 NAPAP54920 295 aa7.21□□□□□ -1.26
VPS13B-202ENST00000357162 COG7P83436 770 aa7.21□□□□□ -1.26
VPS13B-202ENST00000357162 ZNF804AQ7Z570 1209 aa7.21□□□□□ -1.26
VPS13B-202ENST00000357162 ARHGEF25Q86VW2 580 aa7.21□□□□□ -1.26
VPS13B-202ENST00000357162 FBXO18Q8NFZ0 1043 aa7.21□□□□□ -1.26
VPS13B-202ENST00000357162 MORC2Q9Y6X9 1032 aaPredicted RBP7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms