RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 PCMTD1Q96MG8 357 aaPredicted RBP11.41□□□□□ -0.58
PTPRA-203ENST00000356147 GSDMAQ96QA5 445 aa11.41□□□□□ -0.58
PTPRA-203ENST00000356147 JADE2Q9NQC1 790 aa11.41□□□□□ -0.58
PTPRA-203ENST00000356147 EHD2Q9NZN4 543 aa11.41□□□□□ -0.58
PTPRA-203ENST00000356147 AKAP11Q9UKA4 1901 aa11.41□□□□□ -0.58
PTPRA-203ENST00000356147 PHRF1Q9P1Y6 1649 aaKnown RBP11.41□□□□□ -0.58
PTPRA-203ENST00000356147 SPATA31A3Q5VYP0 1347 aa11.41□□□□□ -0.58
PTPRA-203ENST00000356147 USP14P54578 494 aa11.41□□□□□ -0.58
PTPRA-203ENST00000356147 SLC7A5Q01650 507 aa11.41□□□□□ -0.58
PTPRA-203ENST00000356147 KRT26Q7Z3Y9 468 aa11.41□□□□□ -0.58
PTPRA-203ENST00000356147 TICAM2Q86XR7 235 aa11.41□□□□□ -0.58
PTPRA-203ENST00000356147 IQUBQ8NA54 791 aa11.41□□□□□ -0.58
PTPRA-203ENST00000356147 CNNM2Q9H8M5 875 aa11.41□□□□□ -0.58
PTPRA-203ENST00000356147 PRDM11Q9NQV5 511 aa11.41□□□□□ -0.58
PTPRA-203ENST00000356147 HPCAL4Q9UM19 191 aa11.41□□□□□ -0.58
PTPRA-203ENST00000356147 SAR1BQ9Y6B6 198 aa11.41□□□□□ -0.58
PTPRA-203ENST00000356147 MST1RQ04912 1400 aa11.4□□□□□ -0.58
PTPRA-203ENST00000356147 B4DLN1 442 aa11.4□□□□□ -0.58
PTPRA-203ENST00000356147 CXCR5P32302 372 aa11.4□□□□□ -0.58
PTPRA-203ENST00000356147 CCT5P48643 541 aa11.4□□□□□ -0.58
PTPRA-203ENST00000356147 DNA2P51530 1060 aa11.4□□□□□ -0.58
PTPRA-203ENST00000356147 STIM1Q13586 685 aa11.4□□□□□ -0.58
PTPRA-203ENST00000356147 IRF2BP1Q8IU81 584 aa11.4□□□□□ -0.58
PTPRA-203ENST00000356147 ELOA2Q8IYF1 753 aaPredicted RBP11.4□□□□□ -0.58
PTPRA-203ENST00000356147 MICALL1Q8N3F8 863 aa11.4□□□□□ -0.58
PTPRA-203ENST00000356147 ENAHQ8N8S7 591 aaPredicted RBP11.4□□□□□ -0.58
PTPRA-203ENST00000356147 JAKMIP2Q96AA8 810 aa11.4□□□□□ -0.58
PTPRA-203ENST00000356147 RRP36Q96EU6 259 aaKnown RBP11.4□□□□□ -0.58
PTPRA-203ENST00000356147 NACAP1Q9BZK3 213 aa11.4□□□□□ -0.58
PTPRA-203ENST00000356147 GBP3Q9H0R5 595 aa11.4□□□□□ -0.58
PTPRA-203ENST00000356147 CCDC196A0A1B0GTZ2 297 aa11.4□□□□□ -0.58
PTPRA-203ENST00000356147 PARP1P09874 1014 aaKnown RBP11.4□□□□□ -0.58
PTPRA-203ENST00000356147 CYP7A1P22680 504 aa11.4□□□□□ -0.58
PTPRA-203ENST00000356147 LIG3P49916 1009 aa11.4□□□□□ -0.58
PTPRA-203ENST00000356147 GTF2A1P52655 376 aaPredicted RBP11.4□□□□□ -0.58
PTPRA-203ENST00000356147 DYNLL1P63167 89 aaKnown RBP11.4□□□□□ -0.58
PTPRA-203ENST00000356147 WDR59Q6PJI9 974 aa11.4□□□□□ -0.58
PTPRA-203ENST00000356147 TRAPPC11Q7Z392 1133 aa11.4□□□□□ -0.58
PTPRA-203ENST00000356147 CRACR2AQ9BSW2 395 aa11.4□□□□□ -0.59
PTPRA-203ENST00000356147 KAT14Q9H8E8 782 aa11.4□□□□□ -0.59
PTPRA-203ENST00000356147 LIMA1Q9UHB6 759 aaKnown RBP11.4□□□□□ -0.59
PTPRA-203ENST00000356147 LUC7L2Q9Y383 392 aaKnown RBP11.4□□□□□ -0.59
PTPRA-203ENST00000356147 ABCC12Q96J65 1359 aa11.4□□□□□ -0.59
PTPRA-203ENST00000356147 GLI3P10071 1580 aa11.39□□□□□ -0.59
PTPRA-203ENST00000356147 ZPR1O75312 459 aa11.39□□□□□ -0.59
PTPRA-203ENST00000356147 PRPF6O94906 941 aaKnown RBP11.39□□□□□ -0.59
PTPRA-203ENST00000356147 PLEKP08567 350 aaPredicted RBP11.39□□□□□ -0.59
PTPRA-203ENST00000356147 MAGEA9P43362 315 aa11.39□□□□□ -0.59
PTPRA-203ENST00000356147 EIF5P55010 431 aaKnown RBP11.39□□□□□ -0.59
PTPRA-203ENST00000356147 PUM3Q15397 648 aaKnown RBP11.39□□□□□ -0.59
PTPRA-203ENST00000356147 FAM47AQ5JRC9 791 aa11.39□□□□□ -0.59
PTPRA-203ENST00000356147 STAG1Q8WVM7 1258 aa11.39□□□□□ -0.59
PTPRA-203ENST00000356147 PHF20Q9BVI0 1012 aa11.39□□□□□ -0.59
PTPRA-203ENST00000356147 SELENOOQ9BVL4 669 aa11.39□□□□□ -0.59
PTPRA-203ENST00000356147 TMOD3Q9NYL9 352 aa11.39□□□□□ -0.59
PTPRA-203ENST00000356147 SAMM50Q9Y512 469 aa11.39□□□□□ -0.59
PTPRA-203ENST00000356147 C1orf167Q5SNV9 1468 aa11.39□□□□□ -0.59
PTPRA-203ENST00000356147 TMEM94Q12767 1356 aa11.39□□□□□ -0.59
PTPRA-203ENST00000356147 SPEF2Q9C093 1822 aa11.39□□□□□ -0.59
PTPRA-203ENST00000356147 RPN1P04843 607 aaKnown RBP11.39□□□□□ -0.59
PTPRA-203ENST00000356147 ATF3P18847 181 aa11.39□□□□□ -0.59
PTPRA-203ENST00000356147 ARID4AP29374 1257 aaPredicted RBP11.39□□□□□ -0.59
PTPRA-203ENST00000356147 NLRP5P59047 1200 aa11.39□□□□□ -0.59
PTPRA-203ENST00000356147 IFIT1BQ5T764 474 aaKnown RBP11.39□□□□□ -0.59
PTPRA-203ENST00000356147 GIGYF2Q6Y7W6 1299 aaKnown RBP11.39□□□□□ -0.59
PTPRA-203ENST00000356147 ANKRD20A12PQ8NF67 263 aa11.39□□□□□ -0.59
PTPRA-203ENST00000356147 OR8K1Q8NGG5 319 aa11.39□□□□□ -0.59
PTPRA-203ENST00000356147 LPIN2Q92539 896 aa11.39□□□□□ -0.59
PTPRA-203ENST00000356147 CCDC51Q96ER9 411 aa11.39□□□□□ -0.59
PTPRA-203ENST00000356147 PCDH11XQ9BZA7 1347 aa11.39□□□□□ -0.59
PTPRA-203ENST00000356147 PCDH11YQ9BZA8 1340 aa11.39□□□□□ -0.59
PTPRA-203ENST00000356147 AGPSO00116 658 aa11.38□□□□□ -0.59
PTPRA-203ENST00000356147 UQCRFS1P1P0C7P4 283 aa11.38□□□□□ -0.59
PTPRA-203ENST00000356147 IDEP14735 1019 aa11.38□□□□□ -0.59
PTPRA-203ENST00000356147 XBP1P17861 261 aa11.38□□□□□ -0.59
PTPRA-203ENST00000356147 ALX1Q15699 326 aa11.38□□□□□ -0.59
PTPRA-203ENST00000356147 NPY5RQ15761 445 aa11.38□□□□□ -0.59
PTPRA-203ENST00000356147 PDXDC2PQ6P474 469 aa11.38□□□□□ -0.59
PTPRA-203ENST00000356147 SND1Q7KZF4 910 aaKnown RBP eCLIP11.38□□□□□ -0.59
PTPRA-203ENST00000356147 ANKRD13CQ8N6S4 541 aa11.38□□□□□ -0.59
PTPRA-203ENST00000356147 HPS3Q969F9 1004 aa11.38□□□□□ -0.59
PTPRA-203ENST00000356147 TRIM47Q96LD4 638 aa11.38□□□□□ -0.59
PTPRA-203ENST00000356147 ACBD3Q9H3P7 528 aa11.38□□□□□ -0.59
PTPRA-203ENST00000356147 FBXO3Q9UK99 471 aa11.38□□□□□ -0.59
PTPRA-203ENST00000356147 ZBTB1Q9Y2K1 713 aa11.38□□□□□ -0.59
PTPRA-203ENST00000356147 JRKLQ9Y4A0 524 aa11.38□□□□□ -0.59
PTPRA-203ENST00000356147 MYH7P12883 1935 aa11.38□□□□□ -0.59
PTPRA-203ENST00000356147 PKD1L3Q7Z443 1732 aa11.38□□□□□ -0.59
PTPRA-203ENST00000356147 TRIM21P19474 475 aaKnown RBP11.38□□□□□ -0.59
PTPRA-203ENST00000356147 TSR1Q2NL82 804 aaKnown RBP11.38□□□□□ -0.59
PTPRA-203ENST00000356147 WDR93Q6P2C0 686 aa11.38□□□□□ -0.59
PTPRA-203ENST00000356147 COG1Q8WTW3 980 aa11.38□□□□□ -0.59
PTPRA-203ENST00000356147 GPKOWQ92917 476 aaPredicted RBP eCLIP11.38□□□□□ -0.59
PTPRA-203ENST00000356147 RNF26Q9BY78 433 aaPredicted RBP11.38□□□□□ -0.59
PTPRA-203ENST00000356147 MED4Q9NPJ6 270 aa11.38□□□□□ -0.59
PTPRA-203ENST00000356147 DMGDHQ9UI17 866 aaKnown RBP11.38□□□□□ -0.59
PTPRA-203ENST00000356147 RWDD2AQ9UIY3 292 aa11.38□□□□□ -0.59
PTPRA-203ENST00000356147 DDX60Q8IY21 1712 aaKnown RBP11.38□□□□□ -0.59
PTPRA-203ENST00000356147 ZC3H4Q9UPT8 1303 aaKnown RBP11.38□□□□□ -0.59
PTPRA-203ENST00000356147 KIF1AQ12756 1690 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms