RNA–Protein interactions for RNA: ENST00000355765.10

PRPF39-201, Transcript of pre-mRNA processing factor 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF39, Length 2,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-201ENST00000355765 WASF1Q92558 559 aa21.2■□□□□ 0.98
PRPF39-201ENST00000355765 GSDMAQ96QA5 445 aa21.2■□□□□ 0.98
PRPF39-201ENST00000355765 SH3GL2Q99962 352 aa21.2■□□□□ 0.98
PRPF39-201ENST00000355765 SMARCAL1Q9NZC9 954 aa21.2■□□□□ 0.98
PRPF39-201ENST00000355765 CCDC196A0A1B0GTZ2 297 aa21.19■□□□□ 0.98
PRPF39-201ENST00000355765 PPARDQ03181 441 aa21.19■□□□□ 0.98
PRPF39-201ENST00000355765 NELFBQ8WX92 580 aa21.19■□□□□ 0.98
PRPF39-201ENST00000355765 PSMB7Q99436 277 aa21.19■□□□□ 0.98
PRPF39-201ENST00000355765 ZBTB3Q9H5J0 574 aa21.19■□□□□ 0.98
PRPF39-201ENST00000355765 STK36Q9NRP7 1315 aa21.19■□□□□ 0.98
PRPF39-201ENST00000355765 FNTAP49354 379 aa21.19■□□□□ 0.98
PRPF39-201ENST00000355765 TRIM14Q14142 442 aa21.19■□□□□ 0.98
PRPF39-201ENST00000355765 WDR59Q6PJI9 974 aa21.19■□□□□ 0.98
PRPF39-201ENST00000355765 SMCR8Q8TEV9 937 aaPredicted RBP21.19■□□□□ 0.98
PRPF39-201ENST00000355765 AATFQ9NY61 560 aaKnown RBP eCLIP21.19■□□□□ 0.982e-7■■■■■ 32.8
PRPF39-201ENST00000355765 LUC7L2Q9Y383 392 aaKnown RBP21.19■□□□□ 0.98
PRPF39-201ENST00000355765 hCG_1642624A0A1W2PR95 340 aa21.19■□□□□ 0.98
PRPF39-201ENST00000355765 GOLGA8KD6RF30 607 aa21.19■□□□□ 0.98
PRPF39-201ENST00000355765 GCP02774 474 aa21.19■□□□□ 0.98
PRPF39-201ENST00000355765 TDO2P48775 406 aa21.19■□□□□ 0.98
PRPF39-201ENST00000355765 CYP27A1Q02318 531 aa21.19■□□□□ 0.98
PRPF39-201ENST00000355765 SGMS1Q86VZ5 419 aa21.19■□□□□ 0.98
PRPF39-201ENST00000355765 NUP133Q8WUM0 1156 aa21.19■□□□□ 0.98
PRPF39-201ENST00000355765 RPGRIP1Q96KN7 1286 aa21.19■□□□□ 0.98
PRPF39-201ENST00000355765 RUFY1Q96T51 708 aa21.19■□□□□ 0.98
PRPF39-201ENST00000355765 TRIM75PA6NK02 468 aa21.18■□□□□ 0.98
PRPF39-201ENST00000355765 PAK1Q13153 545 aa21.18■□□□□ 0.98
PRPF39-201ENST00000355765 RTN1Q16799 776 aa21.18■□□□□ 0.98
PRPF39-201ENST00000355765 WDR17Q8IZU2 1322 aa21.18■□□□□ 0.98
PRPF39-201ENST00000355765 ARFGEF2Q9Y6D5 1785 aa21.18■□□□□ 0.98
PRPF39-201ENST00000355765 TRIM49BA6NDI0 452 aa21.18■□□□□ 0.98
PRPF39-201ENST00000355765 TACC3Q9Y6A5 838 aa21.18■□□□□ 0.98
PRPF39-201ENST00000355765 LRRC10BA6NIK2 292 aa21.17■□□□□ 0.98
PRPF39-201ENST00000355765 KRT86O43790 486 aa21.17■□□□□ 0.98
PRPF39-201ENST00000355765 MCAMP43121 646 aa21.17■□□□□ 0.98
PRPF39-201ENST00000355765 ATP2B2Q01814 1243 aa21.17■□□□□ 0.98
PRPF39-201ENST00000355765 TSR1Q2NL82 804 aaKnown RBP21.17■□□□□ 0.98
PRPF39-201ENST00000355765 EHD2Q9NZN4 543 aa21.17■□□□□ 0.98
PRPF39-201ENST00000355765 GDAQ9Y2T3 454 aa21.17■□□□□ 0.98
PRPF39-201ENST00000355765 XDHP47989 1333 aa21.17■□□□□ 0.98
PRPF39-201ENST00000355765 RNF187Q5TA31 235 aaPredicted RBP21.17■□□□□ 0.98
PRPF39-201ENST00000355765 ADD2P35612 726 aa21.16■□□□□ 0.98
PRPF39-201ENST00000355765 ZNF174Q15697 407 aa21.16■□□□□ 0.98
PRPF39-201ENST00000355765 CCDC70Q6NSX1 233 aa21.16■□□□□ 0.98
PRPF39-201ENST00000355765 EEF2KMTQ96G04 330 aa21.16■□□□□ 0.98
PRPF39-201ENST00000355765 CENPHQ9H3R5 247 aa21.16■□□□□ 0.98
PRPF39-201ENST00000355765 USP54Q70EL1 1684 aa21.16■□□□□ 0.98
PRPF39-201ENST00000355765 GPTP24298 496 aa21.16■□□□□ 0.98
PRPF39-201ENST00000355765 CCDC57Q2TAC2 916 aa21.16■□□□□ 0.98
PRPF39-201ENST00000355765 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.16■□□□□ 0.98
PRPF39-201ENST00000355765 SPEF2Q9C093 1822 aa21.16■□□□□ 0.98
PRPF39-201ENST00000355765 MEFVO15553 781 aaPredicted RBP21.15■□□□□ 0.98
PRPF39-201ENST00000355765 OPA1O60313 960 aa21.15■□□□□ 0.98
PRPF39-201ENST00000355765 CIAO1O76071 339 aa21.15■□□□□ 0.98
PRPF39-201ENST00000355765 KRT14P02533 472 aa21.15■□□□□ 0.98
PRPF39-201ENST00000355765 GPIHBP1Q8IV16 184 aa21.15■□□□□ 0.98
PRPF39-201ENST00000355765 SHISA4Q96DD7 197 aa21.15■□□□□ 0.98
PRPF39-201ENST00000355765 RWDD2AQ9UIY3 292 aa21.15■□□□□ 0.98
PRPF39-201ENST00000355765 PRDM1O75626 825 aa21.15■□□□□ 0.98
PRPF39-201ENST00000355765 GUCY1A3Q02108 690 aa21.15■□□□□ 0.98
PRPF39-201ENST00000355765 APBA1Q02410 837 aa21.15■□□□□ 0.98
PRPF39-201ENST00000355765 SPAG1Q07617 926 aa21.15■□□□□ 0.98
PRPF39-201ENST00000355765 B4GALNT4Q76KP1 1039 aa21.15■□□□□ 0.98
PRPF39-201ENST00000355765 AMOTL1Q8IY63 956 aa21.15■□□□□ 0.98
PRPF39-201ENST00000355765 GIMAP7Q8NHV1 300 aa21.15■□□□□ 0.98
PRPF39-201ENST00000355765 PIH1D3Q9NQM4 214 aaKnown RBP21.15■□□□□ 0.98
PRPF39-201ENST00000355765 AGPAT5Q9NUQ2 364 aa21.15■□□□□ 0.98
PRPF39-201ENST00000355765 ZNF532Q9HCE3 1301 aa21.15■□□□□ 0.98
PRPF39-201ENST00000355765 NBPF26B4DH59 902 aa21.15■□□□□ 0.98
PRPF39-201ENST00000355765 SCP2P22307 547 aa21.15■□□□□ 0.98
PRPF39-201ENST00000355765 CXCR5P32302 372 aa21.15■□□□□ 0.98
PRPF39-201ENST00000355765 NBPF10Q6P3W6 841 aaKnown RBP21.15■□□□□ 0.98
PRPF39-201ENST00000355765 NBPF15Q8N660 670 aa21.15■□□□□ 0.98
PRPF39-201ENST00000355765 HSF2BPO75031 334 aa21.14■□□□□ 0.97
PRPF39-201ENST00000355765 DEXIO95424 95 aa21.14■□□□□ 0.97
PRPF39-201ENST00000355765 PARP1P09874 1014 aaKnown RBP21.14■□□□□ 0.97
PRPF39-201ENST00000355765 KRT83P78385 493 aa21.14■□□□□ 0.97
PRPF39-201ENST00000355765 CRACR2BQ8N4Y2 399 aaPredicted RBP21.14■□□□□ 0.97
PRPF39-201ENST00000355765 MB21D1Q8N884 522 aa21.14■□□□□ 0.97
PRPF39-201ENST00000355765 ZKSCAN4Q969J2 545 aaPredicted RBP21.14■□□□□ 0.97
PRPF39-201ENST00000355765 LIFRP42702 1097 aa21.14■□□□□ 0.97
PRPF39-201ENST00000355765 KLK7P49862 253 aa21.14■□□□□ 0.97
PRPF39-201ENST00000355765 RAPGEF4Q8WZA2 1011 aa21.14■□□□□ 0.97
PRPF39-201ENST00000355765 DNAJC7Q99615 494 aa21.14■□□□□ 0.97
PRPF39-201ENST00000355765 TBC1D2BQ9UPU7 963 aa21.14■□□□□ 0.97
PRPF39-201ENST00000355765 IRF2BP1Q8IU81 584 aa21.13■□□□□ 0.97
PRPF39-201ENST00000355765 CREG2Q8IUH2 290 aa21.13■□□□□ 0.97
PRPF39-201ENST00000355765 EHBP1Q8NDI1 1231 aa21.13■□□□□ 0.97
PRPF39-201ENST00000355765 ZIM3Q96PE6 472 aa21.13■□□□□ 0.97
PRPF39-201ENST00000355765 MTRQ99707 1265 aa21.13■□□□□ 0.97
PRPF39-201ENST00000355765 FSBPO95073 299 aa21.13■□□□□ 0.97
PRPF39-201ENST00000355765 PHKG2P15735 406 aa21.13■□□□□ 0.97
PRPF39-201ENST00000355765 NNTQ13423 1086 aa21.13■□□□□ 0.97
PRPF39-201ENST00000355765 IQCEQ6IPM2 695 aa21.13■□□□□ 0.97
PRPF39-201ENST00000355765 RNPC3Q96LT9 517 aaKnown RBP21.13■□□□□ 0.97
PRPF39-201ENST00000355765 CLGNO14967 610 aa21.12■□□□□ 0.97
PRPF39-201ENST00000355765 RDXP35241 583 aaKnown RBP21.12■□□□□ 0.97
PRPF39-201ENST00000355765 PRCPP42785 496 aa21.12■□□□□ 0.97
PRPF39-201ENST00000355765 SEC24CP53992 1094 aa21.12■□□□□ 0.97
PRPF39-201ENST00000355765 SKOR1P84550 965 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms