RNA–Protein interactions for RNA: ENST00000354506.10

RPE-201, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 3,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-201ENST00000354506 XDHP47989 1333 aa10.87□□□□□ -0.67
RPE-201ENST00000354506 LAMB1P07942 1786 aa10.87□□□□□ -0.67
RPE-201ENST00000354506 MAGEB6P1A0A0J9YX57 407 aa10.87□□□□□ -0.67
RPE-201ENST00000354506 RNF225M0QZC1 329 aaPredicted RBP10.87□□□□□ -0.67
RPE-201ENST00000354506 GYPCP04921 128 aa10.87□□□□□ -0.67
RPE-201ENST00000354506 CASP14P31944 242 aa10.87□□□□□ -0.67
RPE-201ENST00000354506 HSPA2P54652 639 aa10.87□□□□□ -0.67
RPE-201ENST00000354506 NCAPH2Q6IBW4 605 aa10.87□□□□□ -0.67
RPE-201ENST00000354506 CTR9Q6PD62 1173 aa10.87□□□□□ -0.67
RPE-201ENST00000354506 C4orf32Q8N8J7 132 aa10.87□□□□□ -0.67
RPE-201ENST00000354506 IGSF22Q8N9C0 903 aa10.87□□□□□ -0.67
RPE-201ENST00000354506 CTAGE1Q96RT6 745 aa10.87□□□□□ -0.67
RPE-201ENST00000354506 PNKPQ96T60 521 aa10.87□□□□□ -0.67
RPE-201ENST00000354506 LIMA1Q9UHB6 759 aaKnown RBP10.87□□□□□ -0.67
RPE-201ENST00000354506 V9GY48 417 aaPredicted RBP10.87□□□□□ -0.67
RPE-201ENST00000354506 ROBO1Q9Y6N7 1651 aa10.87□□□□□ -0.67
RPE-201ENST00000354506 MFAP3LO75121 409 aa10.87□□□□□ -0.67
RPE-201ENST00000354506 IGHMBP2P38935 993 aaKnown RBP10.87□□□□□ -0.67
RPE-201ENST00000354506 LONRF2Q1L5Z9 754 aa10.87□□□□□ -0.67
RPE-201ENST00000354506 TMTC3Q6ZXV5 915 aa10.87□□□□□ -0.67
RPE-201ENST00000354506 SLF1Q9BQI6 1058 aa10.87□□□□□ -0.67
RPE-201ENST00000354506 FUT8Q9BYC5 575 aa10.87□□□□□ -0.67
RPE-201ENST00000354506 HDAC6Q9UBN7 1215 aa10.87□□□□□ -0.67
RPE-201ENST00000354506 KIAA1551Q9HCM1 1747 aa10.87□□□□□ -0.67
RPE-201ENST00000354506 CNTNAP5Q8WYK1 1306 aa10.87□□□□□ -0.67
RPE-201ENST00000354506 SRGAP2O75044 1071 aa10.86□□□□□ -0.67
RPE-201ENST00000354506 DDAH1O94760 285 aa10.86□□□□□ -0.67
RPE-201ENST00000354506 CCDC175P0C221 793 aa10.86□□□□□ -0.67
RPE-201ENST00000354506 AKAP17AQ02040 695 aaKnown RBP10.86□□□□□ -0.67
RPE-201ENST00000354506 SRBD1Q8N5C6 995 aaKnown RBP10.86□□□□□ -0.67
RPE-201ENST00000354506 RIN2Q8WYP3 895 aaPredicted RBP10.86□□□□□ -0.67
RPE-201ENST00000354506 EXOC5O00471 708 aa10.86□□□□□ -0.67
RPE-201ENST00000354506 MAP2K7O14733 419 aa10.86□□□□□ -0.67
RPE-201ENST00000354506 ADAMTS3O15072 1205 aa10.86□□□□□ -0.67
RPE-201ENST00000354506 CALM1P0DP23 149 aa10.86□□□□□ -0.67
RPE-201ENST00000354506 CALM2P0DP24 149 aa10.86□□□□□ -0.67
RPE-201ENST00000354506 CALM3P0DP25 149 aa10.86□□□□□ -0.67
RPE-201ENST00000354506 XBP1P17861 261 aa10.86□□□□□ -0.67
RPE-201ENST00000354506 TXLNAP40222 546 aa10.86□□□□□ -0.67
RPE-201ENST00000354506 TNNT3P45378 269 aaPredicted RBP10.86□□□□□ -0.67
RPE-201ENST00000354506 CRKLP46109 303 aaKnown RBP10.86□□□□□ -0.67
RPE-201ENST00000354506 HNRNPLLQ8WVV9 542 aaKnown RBP10.86□□□□□ -0.67
RPE-201ENST00000354506 CCDC87Q9NVE4 849 aa10.86□□□□□ -0.67
RPE-201ENST00000354506 TAB2Q9NYJ8 693 aa10.86□□□□□ -0.67
RPE-201ENST00000354506 SYNRGQ9UMZ2 1314 aa10.86□□□□□ -0.67
RPE-201ENST00000354506 COL5A3P25940 1745 aaPredicted RBP10.86□□□□□ -0.67
RPE-201ENST00000354506 VEGFAP15692 232 aaPredicted RBP10.85□□□□□ -0.67
RPE-201ENST00000354506 TAF1P21675 1872 aa10.85□□□□□ -0.67
RPE-201ENST00000354506 FXR1P51114 621 aaKnown RBP eCLIP10.85□□□□□ -0.67
RPE-201ENST00000354506 ZSCAN26Q16670 478 aa10.85□□□□□ -0.67
RPE-201ENST00000354506 SMIM5Q71RC9 77 aa10.85□□□□□ -0.67
RPE-201ENST00000354506 PPFIBP1Q86W92 1011 aa10.85□□□□□ -0.67
RPE-201ENST00000354506 SLC35F6Q8N357 371 aa10.85□□□□□ -0.67
RPE-201ENST00000354506 CCDC51Q96ER9 411 aa10.85□□□□□ -0.67
RPE-201ENST00000354506 PSMB7Q99436 277 aa10.85□□□□□ -0.67
RPE-201ENST00000354506 CALCOCO1Q9P1Z2 691 aa10.85□□□□□ -0.67
RPE-201ENST00000354506 RAB21Q9UL25 225 aa10.85□□□□□ -0.67
RPE-201ENST00000354506 GUCA1BQ9UMX6 200 aa10.85□□□□□ -0.67
RPE-201ENST00000354506 CTNND2Q9UQB3 1225 aa10.85□□□□□ -0.67
RPE-201ENST00000354506 MYH13Q9UKX3 1938 aa10.85□□□□□ -0.67
RPE-201ENST00000354506 USP5P45974 858 aa10.85□□□□□ -0.67
RPE-201ENST00000354506 TRAPPC10P48553 1259 aa10.85□□□□□ -0.67
RPE-201ENST00000354506 DNA2P51530 1060 aa10.85□□□□□ -0.67
RPE-201ENST00000354506 CHMP4BP1P59074 171 aa10.85□□□□□ -0.67
RPE-201ENST00000354506 PTGDRQ13258 359 aa10.85□□□□□ -0.67
RPE-201ENST00000354506 IFIT1BQ5T764 474 aaKnown RBP10.85□□□□□ -0.67
RPE-201ENST00000354506 CATIPQ7Z7H3 387 aa10.85□□□□□ -0.67
RPE-201ENST00000354506 ANKZF1Q9H8Y5 726 aa10.85□□□□□ -0.67
RPE-201ENST00000354506 RWDD2AQ9UIY3 292 aa10.85□□□□□ -0.67
RPE-201ENST00000354506 ADAM21Q9UKJ8 722 aa10.85□□□□□ -0.67
RPE-201ENST00000354506 FAN1Q9Y2M0 1017 aa10.85□□□□□ -0.67
RPE-201ENST00000354506 ZNF831Q5JPB2 1677 aa10.85□□□□□ -0.67
RPE-201ENST00000354506 M0R2N6 131 aa10.85□□□□□ -0.67
RPE-201ENST00000354506 ORC4O43929 436 aa10.85□□□□□ -0.67
RPE-201ENST00000354506 DYNLL1P63167 89 aaKnown RBP10.85□□□□□ -0.67
RPE-201ENST00000354506 UBE4AQ14139 1066 aa10.85□□□□□ -0.67
RPE-201ENST00000354506 SF3B3Q15393 1217 aaKnown RBP10.85□□□□□ -0.67
RPE-201ENST00000354506 TTC38Q5R3I4 469 aa10.85□□□□□ -0.67
RPE-201ENST00000354506 MSL3Q8N5Y2 521 aaKnown RBP10.85□□□□□ -0.67
RPE-201ENST00000354506 NOA1Q8NC60 698 aaKnown RBP10.85□□□□□ -0.67
RPE-201ENST00000354506 DRC1Q96MC2 740 aa10.85□□□□□ -0.67
RPE-201ENST00000354506 ABCB6Q9NP58 842 aa10.85□□□□□ -0.67
RPE-201ENST00000354506 BSDC1Q9NW68 430 aaPredicted RBP10.85□□□□□ -0.67
RPE-201ENST00000354506 ARHGAP25P42331 645 aa10.84□□□□□ -0.67
RPE-201ENST00000354506 GYG1P46976 350 aa10.84□□□□□ -0.67
RPE-201ENST00000354506 ERVK-24P63145 666 aa10.84□□□□□ -0.67
RPE-201ENST00000354506 ITPK1Q13572 414 aa10.84□□□□□ -0.67
RPE-201ENST00000354506 TUBB2AQ13885 445 aa10.84□□□□□ -0.67
RPE-201ENST00000354506 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.84□□□□□ -0.67
RPE-201ENST00000354506 SRGAP1Q7Z6B7 1085 aa10.84□□□□□ -0.67
RPE-201ENST00000354506 MSANTD4Q8NCY6 345 aa10.84□□□□□ -0.67
RPE-201ENST00000354506 GOLGA1Q92805 767 aa10.84□□□□□ -0.67
RPE-201ENST00000354506 FAM84BQ96KN1 310 aaPredicted RBP10.84□□□□□ -0.67
RPE-201ENST00000354506 TUBB2BQ9BVA1 445 aa10.84□□□□□ -0.67
RPE-201ENST00000354506 PDS5AQ29RF7 1337 aaKnown RBP10.84□□□□□ -0.67
RPE-201ENST00000354506 ZNF335Q9H4Z2 1342 aaPredicted RBP10.84□□□□□ -0.67
RPE-201ENST00000354506 KRT31Q15323 416 aa10.84□□□□□ -0.67
RPE-201ENST00000354506 TTC19Q6DKK2 380 aaPredicted RBP10.84□□□□□ -0.67
RPE-201ENST00000354506 C3orf67Q6ZVT6 689 aa10.84□□□□□ -0.67
RPE-201ENST00000354506 FBXO33Q7Z6M2 555 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms