RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 BMP1P13497 986 aa19.31■□□□□ 0.68
DDX55-202ENST00000354291 CSF2RAP15509 400 aa19.31■□□□□ 0.68
DDX55-202ENST00000354291 MTX1Q13505 466 aa19.31■□□□□ 0.68
DDX55-202ENST00000354291 VTI1AQ96AJ9 217 aa19.31■□□□□ 0.68
DDX55-202ENST00000354291 ATG4CQ96DT6 458 aa19.31■□□□□ 0.68
DDX55-202ENST00000354291 MMP19Q99542 508 aa19.31■□□□□ 0.68
DDX55-202ENST00000354291 DBNDD2Q9BQY9 259 aa19.31■□□□□ 0.68
DDX55-202ENST00000354291 TSEN34Q9BSV6 310 aaKnown RBP19.31■□□□□ 0.68
DDX55-202ENST00000354291 NKX2-4Q9H2Z4 354 aa19.31■□□□□ 0.68
DDX55-202ENST00000354291 TBX21Q9UL17 535 aa19.31■□□□□ 0.68
DDX55-202ENST00000354291 TCF20Q9UGU0 1960 aaKnown RBP19.31■□□□□ 0.68
DDX55-202ENST00000354291 IDH1O75874 414 aaKnown RBP19.3■□□□□ 0.68
DDX55-202ENST00000354291 POLR3DP05423 398 aaPredicted RBP19.3■□□□□ 0.68
DDX55-202ENST00000354291 AKR1A1P14550 325 aa19.3■□□□□ 0.68
DDX55-202ENST00000354291 TFF2Q03403 129 aa19.3■□□□□ 0.68
DDX55-202ENST00000354291 RAB30Q15771 203 aa19.3■□□□□ 0.68
DDX55-202ENST00000354291 KCNA10Q16322 511 aa19.3■□□□□ 0.68
DDX55-202ENST00000354291 KIAA1755Q5JYT7 1200 aa19.3■□□□□ 0.68
DDX55-202ENST00000354291 RASIP1Q5U651 963 aa19.3■□□□□ 0.68
DDX55-202ENST00000354291 TMEM199Q8N511 208 aa19.3■□□□□ 0.68
DDX55-202ENST00000354291 SLC28A3Q9HAS3 691 aa19.3■□□□□ 0.68
DDX55-202ENST00000354291 CXXC1Q9P0U4 656 aaPredicted RBP19.3■□□□□ 0.68
DDX55-202ENST00000354291 HCN4Q9Y3Q4 1203 aa19.3■□□□□ 0.68
DDX55-202ENST00000354291 REV3LO60673 3130 aa19.3■□□□□ 0.68
DDX55-202ENST00000354291 ADAMTS4O75173 837 aa19.29■□□□□ 0.68
DDX55-202ENST00000354291 ZNF865P0CJ78 1059 aaPredicted RBP19.29■□□□□ 0.68
DDX55-202ENST00000354291 SKIV2LQ15477 1246 aaKnown RBP19.29■□□□□ 0.68
DDX55-202ENST00000354291 SPICE1Q8N0Z3 855 aa19.29■□□□□ 0.68
DDX55-202ENST00000354291 LRFN3Q9BTN0 628 aa19.29■□□□□ 0.68
DDX55-202ENST00000354291 PPP1R12CQ9BZL4 782 aa19.29■□□□□ 0.68
DDX55-202ENST00000354291 CNPY2Q9Y2B0 182 aa19.29■□□□□ 0.68
DDX55-202ENST00000354291 PLXNA1Q9UIW2 1896 aa19.28■□□□□ 0.68
DDX55-202ENST00000354291 SLC25A27O95847 323 aa19.28■□□□□ 0.68
DDX55-202ENST00000354291 KCTD2Q14681 263 aa19.28■□□□□ 0.68
DDX55-202ENST00000354291 TMEM132BQ14DG7 1078 aa19.28■□□□□ 0.68
DDX55-202ENST00000354291 MAGEB6Q8N7X4 407 aa19.28■□□□□ 0.68
DDX55-202ENST00000354291 EPHX3Q9H6B9 360 aa19.28■□□□□ 0.68
DDX55-202ENST00000354291 CDK5RAP2Q96SN8 1893 aa19.28■□□□□ 0.68
DDX55-202ENST00000354291 PNMA6EA0A0J9YXQ4 647 aa19.27■□□□□ 0.68
DDX55-202ENST00000354291 MOXD2PA6NHM9 499 aa19.27■□□□□ 0.68
DDX55-202ENST00000354291 KCNQ1P51787 676 aa19.27■□□□□ 0.68
DDX55-202ENST00000354291 ZNF792Q3KQV3 632 aa19.27■□□□□ 0.68
DDX55-202ENST00000354291 TNNI3KQ59H18 835 aa19.27■□□□□ 0.68
DDX55-202ENST00000354291 PSRC1Q6PGN9 363 aaPredicted RBP19.27■□□□□ 0.68
DDX55-202ENST00000354291 CERS3Q8IU89 383 aa19.27■□□□□ 0.68
DDX55-202ENST00000354291 GLT1D1Q96MS3 346 aa19.27■□□□□ 0.68
DDX55-202ENST00000354291 FPGT-TNNI3KV9GXZ4 949 aa19.27■□□□□ 0.68
DDX55-202ENST00000354291 ZNF236Q9UL36 1845 aa19.27■□□□□ 0.68
DDX55-202ENST00000354291 SYNRGQ9UMZ2 1314 aa19.26■□□□□ 0.67
DDX55-202ENST00000354291 OS9Q13438 667 aaPredicted RBP19.26■□□□□ 0.67
DDX55-202ENST00000354291 AAK1Q2M2I8 961 aa19.26■□□□□ 0.67
DDX55-202ENST00000354291 KLHDC9Q8NEP7 349 aa19.26■□□□□ 0.67
DDX55-202ENST00000354291 FAM184BQ9ULE4 1060 aa19.26■□□□□ 0.67
DDX55-202ENST00000354291 DIS3Q9Y2L1 958 aaKnown RBP19.26■□□□□ 0.67
DDX55-202ENST00000354291 YBX2Q9Y2T7 364 aaKnown RBP19.26■□□□□ 0.67
DDX55-202ENST00000354291 ARIH1Q9Y4X5 557 aaPredicted RBP19.26■□□□□ 0.67
DDX55-202ENST00000354291 MROH7Q68CQ1 1323 aa19.25■□□□□ 0.67
DDX55-202ENST00000354291 SYNGAP1Q96PV0 1343 aa19.25■□□□□ 0.67
DDX55-202ENST00000354291 MYH1P12882 1939 aa19.25■□□□□ 0.67
DDX55-202ENST00000354291 PIEZO1Q92508 2521 aa19.25■□□□□ 0.67
DDX55-202ENST00000354291 IGSF3O75054 1194 aa19.25■□□□□ 0.67
DDX55-202ENST00000354291 FGBP02675 491 aa19.25■□□□□ 0.67
DDX55-202ENST00000354291 GNAI2P04899 355 aa19.25■□□□□ 0.67
DDX55-202ENST00000354291 CYP2C18P33260 490 aa19.25■□□□□ 0.67
DDX55-202ENST00000354291 CDK7P50613 346 aa19.25■□□□□ 0.67
DDX55-202ENST00000354291 RARSP54136 660 aaKnown RBP19.25■□□□□ 0.67
DDX55-202ENST00000354291 IRX5P78411 483 aaPredicted RBP19.25■□□□□ 0.67
DDX55-202ENST00000354291 GPR108Q9NPR9 543 aa19.25■□□□□ 0.67
DDX55-202ENST00000354291 FOCADQ5VW36 1801 aa19.25■□□□□ 0.67
DDX55-202ENST00000354291 ELP1O95163 1332 aa19.25■□□□□ 0.67
DDX55-202ENST00000354291 MYADML2A6NDP7 307 aa19.24■□□□□ 0.67
DDX55-202ENST00000354291 RABGGTBP53611 331 aa19.24■□□□□ 0.67
DDX55-202ENST00000354291 EVX2Q03828 476 aa19.24■□□□□ 0.67
DDX55-202ENST00000354291 TMEM31Q5JXX7 168 aa19.24■□□□□ 0.67
DDX55-202ENST00000354291 CCSAPQ6IQ19 270 aaPredicted RBP19.24■□□□□ 0.67
DDX55-202ENST00000354291 HERVK_113Q902F9 699 aa19.24■□□□□ 0.67
DDX55-202ENST00000354291 ARHGAP45Q92619 1136 aa19.24■□□□□ 0.67
DDX55-202ENST00000354291 MTIF3Q9H2K0 278 aaKnown RBP19.24■□□□□ 0.67
DDX55-202ENST00000354291 IL23AQ9NPF7 189 aa19.24■□□□□ 0.67
DDX55-202ENST00000354291 ZHX1Q9UKY1 873 aaPredicted RBP19.24■□□□□ 0.67
DDX55-202ENST00000354291 ZNFX1Q9P2E3 1918 aaKnown RBP19.23■□□□□ 0.67
DDX55-202ENST00000354291 ARVCFO00192 962 aa19.23■□□□□ 0.67
DDX55-202ENST00000354291 TLR3O15455 904 aaKnown RBP19.23■□□□□ 0.67
DDX55-202ENST00000354291 ASGR1P07306 291 aa19.23■□□□□ 0.67
DDX55-202ENST00000354291 C6orf222P0C671 652 aaPredicted RBP19.23■□□□□ 0.67
DDX55-202ENST00000354291 STAT3P40763 770 aa19.23■□□□□ 0.67
DDX55-202ENST00000354291 GABPAQ06546 454 aa19.23■□□□□ 0.67
DDX55-202ENST00000354291 OTOP2Q7RTS6 562 aa19.23■□□□□ 0.67
DDX55-202ENST00000354291 RIOX2Q8IUF8 465 aa19.23■□□□□ 0.67
DDX55-202ENST00000354291 ZNF512BQ96KM6 892 aaPredicted RBP19.23■□□□□ 0.67
DDX55-202ENST00000354291 ARHGEF10LQ9HCE6 1279 aa19.23■□□□□ 0.67
DDX55-202ENST00000354291 MCM9Q9NXL9 1143 aa19.23■□□□□ 0.67
DDX55-202ENST00000354291 PPP2R2DQ66LE6 453 aa19.22■□□□□ 0.67
DDX55-202ENST00000354291 TMEM179Q6ZVK1 233 aa19.22■□□□□ 0.67
DDX55-202ENST00000354291 CLEC10AQ8IUN9 316 aa19.22■□□□□ 0.67
DDX55-202ENST00000354291 SIAH1Q8IUQ4 282 aa19.22■□□□□ 0.67
DDX55-202ENST00000354291 PCSK9Q8NBP7 692 aaKnown RBP19.22■□□□□ 0.67
DDX55-202ENST00000354291 CCDC8Q9H0W5 538 aaPredicted RBP19.22■□□□□ 0.67
DDX55-202ENST00000354291 FBXO28Q9NVF7 368 aa19.22■□□□□ 0.67
DDX55-202ENST00000354291 A0A0U1RQG5 324 aaPredicted RBP19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms