RNA–Protein interactions for RNA: ENST00000349228.8

TNFSF13-202, Transcript of TNF superfamily member 13, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13, Length 2,036 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-202ENST00000349228 SPDYE4A6NLX3 237 aa17.52■□□□□ 0.4
TNFSF13-202ENST00000349228 CD44P16070 742 aaKnown RBP17.52■□□□□ 0.4
TNFSF13-202ENST00000349228 H2AFXP16104 143 aaPredicted RBP17.52■□□□□ 0.4
TNFSF13-202ENST00000349228 CASQ1P31415 396 aa17.52■□□□□ 0.4
TNFSF13-202ENST00000349228 PDXDC2PQ6P474 469 aa17.52■□□□□ 0.4
TNFSF13-202ENST00000349228 PNMA1Q8ND90 353 aa17.52■□□□□ 0.4
TNFSF13-202ENST00000349228 MNS1Q8NEH6 495 aa17.52■□□□□ 0.4
TNFSF13-202ENST00000349228 EFCAB8A8MWE9 144 aa17.52■□□□□ 0.39
TNFSF13-202ENST00000349228 LAD1O00515 517 aa17.52■□□□□ 0.39
TNFSF13-202ENST00000349228 GNPATO15228 680 aa17.52■□□□□ 0.39
TNFSF13-202ENST00000349228 NMT2O60551 498 aa17.52■□□□□ 0.39
TNFSF13-202ENST00000349228 CYP2D6P10635 497 aa17.52■□□□□ 0.39
TNFSF13-202ENST00000349228 ZSCAN20P17040 1043 aaPredicted RBP17.52■□□□□ 0.39
TNFSF13-202ENST00000349228 ADKP55263 362 aaKnown RBP17.52■□□□□ 0.39
TNFSF13-202ENST00000349228 DMTNQ08495 405 aa17.52■□□□□ 0.39
TNFSF13-202ENST00000349228 CNGA4Q8IV77 575 aa17.52■□□□□ 0.39
TNFSF13-202ENST00000349228 UBXN4Q92575 508 aa17.52■□□□□ 0.39
TNFSF13-202ENST00000349228 ARGLU1Q9NWB6 273 aaPredicted RBP17.52■□□□□ 0.39
TNFSF13-202ENST00000349228 LIMA1Q9UHB6 759 aaKnown RBP17.52■□□□□ 0.39
TNFSF13-202ENST00000349228 WNT7AO00755 349 aa17.51■□□□□ 0.39
TNFSF13-202ENST00000349228 URI1O94763 535 aaPredicted RBP17.51■□□□□ 0.39
TNFSF13-202ENST00000349228 CCDC175P0C221 793 aa17.51■□□□□ 0.39
TNFSF13-202ENST00000349228 TRIM14Q14142 442 aa17.51■□□□□ 0.39
TNFSF13-202ENST00000349228 HSP90AA4PQ58FG1 418 aa17.51■□□□□ 0.39
TNFSF13-202ENST00000349228 ZNF658Q5TYW1 1059 aaPredicted RBP17.51■□□□□ 0.39
TNFSF13-202ENST00000349228 FBXO38Q6PIJ6 1188 aa17.51■□□□□ 0.39
TNFSF13-202ENST00000349228 C4orf32Q8N8J7 132 aa17.51■□□□□ 0.39
TNFSF13-202ENST00000349228 IGSF22Q8N9C0 903 aa17.51■□□□□ 0.39
TNFSF13-202ENST00000349228 MKNK2Q9HBH9 465 aa17.51■□□□□ 0.39
TNFSF13-202ENST00000349228 FAM53CQ9NYF3 392 aa17.51■□□□□ 0.39
TNFSF13-202ENST00000349228 SRP68Q9UHB9 627 aaKnown RBP17.51■□□□□ 0.39
TNFSF13-202ENST00000349228 KIAA1551Q9HCM1 1747 aa17.51■□□□□ 0.39
TNFSF13-202ENST00000349228 MCM7P33993 719 aa17.5■□□□□ 0.39
TNFSF13-202ENST00000349228 GABPB1Q06547 395 aaPredicted RBP17.5■□□□□ 0.39
TNFSF13-202ENST00000349228 GRAPQ13588 217 aa17.5■□□□□ 0.39
TNFSF13-202ENST00000349228 TUBB2AQ13885 445 aa17.5■□□□□ 0.39
TNFSF13-202ENST00000349228 KLHL10Q6JEL2 608 aa17.5■□□□□ 0.39
TNFSF13-202ENST00000349228 ZNF804AQ7Z570 1209 aa17.5■□□□□ 0.39
TNFSF13-202ENST00000349228 ZNF444Q8N0Y2 327 aaPredicted RBP17.5■□□□□ 0.39
TNFSF13-202ENST00000349228 KRT222Q8N1A0 295 aa17.5■□□□□ 0.39
TNFSF13-202ENST00000349228 GRAPLQ8TC17 118 aaPredicted RBP17.5■□□□□ 0.39
TNFSF13-202ENST00000349228 TUBB2BQ9BVA1 445 aa17.5■□□□□ 0.39
TNFSF13-202ENST00000349228 PARP3Q9Y6F1 533 aa17.5■□□□□ 0.39
TNFSF13-202ENST00000349228 XDHP47989 1333 aa17.5■□□□□ 0.39
TNFSF13-202ENST00000349228 LTBP4Q8N2S1 1624 aa17.5■□□□□ 0.39
TNFSF13-202ENST00000349228 USP17L8P0C7I0 530 aa17.5■□□□□ 0.39
TNFSF13-202ENST00000349228 FECHP22830 423 aa17.5■□□□□ 0.39
TNFSF13-202ENST00000349228 MAP3K9P80192 1104 aa17.5■□□□□ 0.39
TNFSF13-202ENST00000349228 GOLGA8FQ08AF8 430 aa17.5■□□□□ 0.39
TNFSF13-202ENST00000349228 GOLGA8DPQ0D2H9 430 aa17.5■□□□□ 0.39
TNFSF13-202ENST00000349228 BMS1Q14692 1282 aaKnown RBP17.5■□□□□ 0.39
TNFSF13-202ENST00000349228 ERCC6LQ2NKX8 1250 aa17.5■□□□□ 0.39
TNFSF13-202ENST00000349228 RRAGBQ5VZM2 374 aa17.5■□□□□ 0.39
TNFSF13-202ENST00000349228 IL17RBQ9NRM6 502 aa17.5■□□□□ 0.39
TNFSF13-202ENST00000349228 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.5■□□□□ 0.39
TNFSF13-202ENST00000349228 V9GYY5 206 aaPredicted RBP17.5■□□□□ 0.39
TNFSF13-202ENST00000349228 CASZ1Q86V15 1759 aa17.49■□□□□ 0.39
TNFSF13-202ENST00000349228 CCDC194A0A1B0GVG4 234 aa17.49■□□□□ 0.39
TNFSF13-202ENST00000349228 PRPHP41219 470 aa17.49■□□□□ 0.39
TNFSF13-202ENST00000349228 GNG11P61952 73 aa17.49■□□□□ 0.39
TNFSF13-202ENST00000349228 PAK1Q13153 545 aa17.49■□□□□ 0.39
TNFSF13-202ENST00000349228 NOM1Q5C9Z4 860 aaKnown RBP17.49■□□□□ 0.39
TNFSF13-202ENST00000349228 DTHD1Q6ZMT9 781 aa17.49■□□□□ 0.39
TNFSF13-202ENST00000349228 MYH13Q9UKX3 1938 aa17.49■□□□□ 0.39
TNFSF13-202ENST00000349228 CCDC88AQ3V6T2 1871 aa17.49■□□□□ 0.39
TNFSF13-202ENST00000349228 H7C1D1 291 aa17.48■□□□□ 0.39
TNFSF13-202ENST00000349228 M0R2N6 131 aa17.48■□□□□ 0.39
TNFSF13-202ENST00000349228 STX17P56962 302 aa17.48■□□□□ 0.39
TNFSF13-202ENST00000349228 IL17AQ16552 155 aa17.48■□□□□ 0.39
TNFSF13-202ENST00000349228 ARHGEF1Q92888 912 aaKnown RBP17.48■□□□□ 0.39
TNFSF13-202ENST00000349228 MAGEF1Q9HAY2 307 aa17.48■□□□□ 0.39
TNFSF13-202ENST00000349228 ANKIB1Q9P2G1 1089 aa17.48■□□□□ 0.39
TNFSF13-202ENST00000349228 CCNL1Q9UK58 526 aaPredicted RBP17.48■□□□□ 0.39
TNFSF13-202ENST00000349228 TAF1P21675 1872 aa17.48■□□□□ 0.39
TNFSF13-202ENST00000349228 NPHP1O15259 732 aa17.48■□□□□ 0.39
TNFSF13-202ENST00000349228 TEX33O43247 280 aa17.48■□□□□ 0.39
TNFSF13-202ENST00000349228 MFAP3LO75121 409 aa17.48■□□□□ 0.39
TNFSF13-202ENST00000349228 TADA3O75528 432 aa17.48■□□□□ 0.39
TNFSF13-202ENST00000349228 RPN1P04843 607 aaKnown RBP17.48■□□□□ 0.39
TNFSF13-202ENST00000349228 TSPY3P0CV98 308 aa17.48■□□□□ 0.39
TNFSF13-202ENST00000349228 TSPY8P0CW00 308 aa17.48■□□□□ 0.39
TNFSF13-202ENST00000349228 SMARCA1P28370 1054 aa17.48■□□□□ 0.39
TNFSF13-202ENST00000349228 TUBB4BP68371 445 aa17.48■□□□□ 0.39
TNFSF13-202ENST00000349228 FAM193AP78312 1265 aa17.48■□□□□ 0.39
TNFSF13-202ENST00000349228 RBL2Q08999 1139 aa17.48■□□□□ 0.39
TNFSF13-202ENST00000349228 KCNB1Q14721 858 aa17.48■□□□□ 0.39
TNFSF13-202ENST00000349228 TOGARAM2Q6ZUX3 1019 aa17.48■□□□□ 0.39
TNFSF13-202ENST00000349228 TXNRD3Q86VQ6 643 aa17.48■□□□□ 0.39
TNFSF13-202ENST00000349228 CCDC12Q8WUD4 166 aaPredicted RBP17.48■□□□□ 0.39
TNFSF13-202ENST00000349228 CUEDC2Q9H467 287 aa17.48■□□□□ 0.39
TNFSF13-202ENST00000349228 MAD2L2Q9UI95 211 aa17.48■□□□□ 0.39
TNFSF13-202ENST00000349228 CTNND2Q9UQB3 1225 aa17.48■□□□□ 0.39
TNFSF13-202ENST00000349228 ATP8B1O43520 1251 aa17.47■□□□□ 0.39
TNFSF13-202ENST00000349228 PLCG2P16885 1265 aa17.47■□□□□ 0.39
TNFSF13-202ENST00000349228 STAT6P42226 847 aa17.47■□□□□ 0.39
TNFSF13-202ENST00000349228 ARHGAP29Q52LW3 1261 aa17.47■□□□□ 0.39
TNFSF13-202ENST00000349228 WWC2Q6AWC2 1192 aa17.47■□□□□ 0.39
TNFSF13-202ENST00000349228 TMTC1Q8IUR5 882 aa17.47■□□□□ 0.39
TNFSF13-202ENST00000349228 CCSER1Q9C0I3 900 aa17.47■□□□□ 0.39
TNFSF13-202ENST00000349228 BARHL2Q9NY43 387 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms