RNA–Protein interactions for RNA: ENST00000347691.9

TRAPPC6B-202, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC6B, Length 3,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-202ENST00000347691 GYS2P54840 703 aa11.39□□□□□ -0.59
TRAPPC6B-202ENST00000347691 TRAPPC11Q7Z392 1133 aa11.39□□□□□ -0.59
TRAPPC6B-202ENST00000347691 ZKSCAN3Q9BRR0 538 aa11.39□□□□□ -0.59
TRAPPC6B-202ENST00000347691 INCENPQ9NQS7 918 aa11.39□□□□□ -0.59
TRAPPC6B-202ENST00000347691 PRDM11Q9NQV5 511 aa11.39□□□□□ -0.59
TRAPPC6B-202ENST00000347691 TNKSO95271 1327 aa11.39□□□□□ -0.59
TRAPPC6B-202ENST00000347691 SHANK3Q9BYB0 1731 aa11.39□□□□□ -0.59
TRAPPC6B-202ENST00000347691 ERVV-1B6SEH8 477 aa11.39□□□□□ -0.59
TRAPPC6B-202ENST00000347691 KRT86O43790 486 aa11.39□□□□□ -0.59
TRAPPC6B-202ENST00000347691 RASGRF1Q13972 1273 aa11.39□□□□□ -0.59
TRAPPC6B-202ENST00000347691 SEC23AQ15436 765 aa11.39□□□□□ -0.59
TRAPPC6B-202ENST00000347691 ARL6IP4Q66PJ3 421 aaKnown RBP11.39□□□□□ -0.59
TRAPPC6B-202ENST00000347691 IQCA1Q86XH1 822 aa11.39□□□□□ -0.59
TRAPPC6B-202ENST00000347691 AFAP1L1Q8TED9 768 aa11.39□□□□□ -0.59
TRAPPC6B-202ENST00000347691 NELFBQ8WX92 580 aa11.39□□□□□ -0.59
TRAPPC6B-202ENST00000347691 IQCDQ96DY2 449 aa11.39□□□□□ -0.59
TRAPPC6B-202ENST00000347691 VPS54Q9P1Q0 977 aa11.39□□□□□ -0.59
TRAPPC6B-202ENST00000347691 LUC7L2Q9Y383 392 aaKnown RBP11.39□□□□□ -0.59
TRAPPC6B-202ENST00000347691 SAR1BQ9Y6B6 198 aa11.39□□□□□ -0.59
TRAPPC6B-202ENST00000347691 MYH13Q9UKX3 1938 aa11.39□□□□□ -0.59
TRAPPC6B-202ENST00000347691 CYLC1P35663 651 aaPredicted RBP11.39□□□□□ -0.59
TRAPPC6B-202ENST00000347691 UBXN1Q04323 297 aa11.39□□□□□ -0.59
TRAPPC6B-202ENST00000347691 SF3B2Q13435 895 aaKnown RBP11.39□□□□□ -0.59
TRAPPC6B-202ENST00000347691 DNAJC10Q8IXB1 793 aa11.39□□□□□ -0.59
TRAPPC6B-202ENST00000347691 C10orf67Q8IYJ2 551 aa11.39□□□□□ -0.59
TRAPPC6B-202ENST00000347691 LCORLQ8N3X6 602 aa11.39□□□□□ -0.59
TRAPPC6B-202ENST00000347691 SLF1Q9BQI6 1058 aa11.39□□□□□ -0.59
TRAPPC6B-202ENST00000347691 NUP58Q9BVL2 599 aa11.39□□□□□ -0.59
TRAPPC6B-202ENST00000347691 VPS16Q9H269 839 aa11.39□□□□□ -0.59
TRAPPC6B-202ENST00000347691 ZNHIT6Q9NWK9 470 aaKnown RBP11.39□□□□□ -0.59
TRAPPC6B-202ENST00000347691 ANO9A1A5B4 782 aa11.38□□□□□ -0.59
TRAPPC6B-202ENST00000347691 GPTP24298 496 aa11.38□□□□□ -0.59
TRAPPC6B-202ENST00000347691 LONP1P36776 959 aaKnown RBP11.38□□□□□ -0.59
TRAPPC6B-202ENST00000347691 MAGEA9P43362 315 aa11.38□□□□□ -0.59
TRAPPC6B-202ENST00000347691 E2F4Q16254 413 aa11.38□□□□□ -0.59
TRAPPC6B-202ENST00000347691 IFIT1BQ5T764 474 aaKnown RBP11.38□□□□□ -0.59
TRAPPC6B-202ENST00000347691 WWC2Q6AWC2 1192 aa11.38□□□□□ -0.59
TRAPPC6B-202ENST00000347691 RETREG2Q8NC44 543 aa11.38□□□□□ -0.59
TRAPPC6B-202ENST00000347691 ZSCAN10Q96SZ4 725 aaPredicted RBP11.38□□□□□ -0.59
TRAPPC6B-202ENST00000347691 DNAJC7Q99615 494 aa11.38□□□□□ -0.59
TRAPPC6B-202ENST00000347691 MAGEC2Q9UBF1 373 aaPredicted RBP11.38□□□□□ -0.59
TRAPPC6B-202ENST00000347691 PKN1Q16512 942 aa11.38□□□□□ -0.59
TRAPPC6B-202ENST00000347691 PAPD7Q5XG87 772 aaKnown RBP11.38□□□□□ -0.59
TRAPPC6B-202ENST00000347691 THAP9Q9H5L6 903 aa11.38□□□□□ -0.59
TRAPPC6B-202ENST00000347691 TAB2Q9NYJ8 693 aa11.38□□□□□ -0.59
TRAPPC6B-202ENST00000347691 LRP2BPQ9P2M1 347 aa11.38□□□□□ -0.59
TRAPPC6B-202ENST00000347691 TACC3Q9Y6A5 838 aa11.38□□□□□ -0.59
TRAPPC6B-202ENST00000347691 COL5A2P05997 1499 aaPredicted RBP11.38□□□□□ -0.59
TRAPPC6B-202ENST00000347691 XDHP47989 1333 aa11.37□□□□□ -0.59
TRAPPC6B-202ENST00000347691 RPN1P04843 607 aaKnown RBP11.37□□□□□ -0.59
TRAPPC6B-202ENST00000347691 PTGDRQ13258 359 aa11.37□□□□□ -0.59
TRAPPC6B-202ENST00000347691 PDXDC2PQ6P474 469 aa11.37□□□□□ -0.59
TRAPPC6B-202ENST00000347691 GUCA1BQ9UMX6 200 aa11.37□□□□□ -0.59
TRAPPC6B-202ENST00000347691 DLEC1Q9Y238 1755 aa11.37□□□□□ -0.59
TRAPPC6B-202ENST00000347691 LGALS16A8MUM7 142 aa11.37□□□□□ -0.59
TRAPPC6B-202ENST00000347691 PPFIA4O75335 1185 aa11.37□□□□□ -0.59
TRAPPC6B-202ENST00000347691 CALML3P27482 149 aa11.37□□□□□ -0.59
TRAPPC6B-202ENST00000347691 PPP1R2P41236 205 aa11.37□□□□□ -0.59
TRAPPC6B-202ENST00000347691 ZNF174Q15697 407 aa11.37□□□□□ -0.59
TRAPPC6B-202ENST00000347691 SMYD4Q8IYR2 804 aaPredicted RBP11.37□□□□□ -0.59
TRAPPC6B-202ENST00000347691 CCDC170Q8IYT3 715 aa11.37□□□□□ -0.59
TRAPPC6B-202ENST00000347691 TNFRSF25Q93038 417 aa11.37□□□□□ -0.59
TRAPPC6B-202ENST00000347691 CRACR2AQ9BSW2 395 aa11.37□□□□□ -0.59
TRAPPC6B-202ENST00000347691 TSGA10Q9BZW7 698 aa11.37□□□□□ -0.59
TRAPPC6B-202ENST00000347691 FAM204AQ9H8W3 233 aa11.37□□□□□ -0.59
TRAPPC6B-202ENST00000347691 RSPH14Q9UHP6 348 aa11.37□□□□□ -0.59
TRAPPC6B-202ENST00000347691 CAPN11Q9UMQ6 739 aa11.37□□□□□ -0.59
TRAPPC6B-202ENST00000347691 PRKAB2O43741 272 aa11.37□□□□□ -0.59
TRAPPC6B-202ENST00000347691 RNF40O75150 1001 aa11.37□□□□□ -0.59
TRAPPC6B-202ENST00000347691 DNM2P50570 870 aa11.37□□□□□ -0.59
TRAPPC6B-202ENST00000347691 FUT2Q10981 343 aa11.37□□□□□ -0.59
TRAPPC6B-202ENST00000347691 KCNB1Q14721 858 aa11.37□□□□□ -0.59
TRAPPC6B-202ENST00000347691 CCDC122Q5T0U0 273 aa11.37□□□□□ -0.59
TRAPPC6B-202ENST00000347691 KIAA1328Q86T90 577 aa11.37□□□□□ -0.59
TRAPPC6B-202ENST00000347691 CMTR1Q8N1G2 835 aaKnown RBP11.37□□□□□ -0.59
TRAPPC6B-202ENST00000347691 MB21D1Q8N884 522 aa11.37□□□□□ -0.59
TRAPPC6B-202ENST00000347691 NOA1Q8NC60 698 aaKnown RBP11.37□□□□□ -0.59
TRAPPC6B-202ENST00000347691 PPM1EQ8WY54 764 aa11.37□□□□□ -0.59
TRAPPC6B-202ENST00000347691 CCDC47Q96A33 483 aaKnown RBP11.37□□□□□ -0.59
TRAPPC6B-202ENST00000347691 V9GY48 417 aaPredicted RBP11.37□□□□□ -0.59
TRAPPC6B-202ENST00000347691 NUP98P52948 1817 aa11.37□□□□□ -0.59
TRAPPC6B-202ENST00000347691 A0A0U1RQJ8 604 aa11.36□□□□□ -0.59
TRAPPC6B-202ENST00000347691 HLFQ16534 295 aa11.36□□□□□ -0.59
TRAPPC6B-202ENST00000347691 FAM114A1Q8IWE2 563 aa11.36□□□□□ -0.59
TRAPPC6B-202ENST00000347691 ATRIPQ8WXE1 791 aa11.36□□□□□ -0.59
TRAPPC6B-202ENST00000347691 TOGARAM1Q9Y4F4 1720 aa11.36□□□□□ -0.59
TRAPPC6B-202ENST00000347691 MAGEB6P1A0A0J9YX57 407 aa11.36□□□□□ -0.59
TRAPPC6B-202ENST00000347691 A6NNZ2 444 aa11.36□□□□□ -0.59
TRAPPC6B-202ENST00000347691 PSMA7O14818 248 aa11.36□□□□□ -0.59
TRAPPC6B-202ENST00000347691 N4BP1O75113 896 aaKnown RBP11.36□□□□□ -0.59
TRAPPC6B-202ENST00000347691 PARP1P09874 1014 aaKnown RBP11.36□□□□□ -0.59
TRAPPC6B-202ENST00000347691 NT5C2P49902 561 aa11.36□□□□□ -0.59
TRAPPC6B-202ENST00000347691 TUBB8Q3ZCM7 444 aa11.36□□□□□ -0.59
TRAPPC6B-202ENST00000347691 TMTC3Q6ZXV5 915 aa11.36□□□□□ -0.59
TRAPPC6B-202ENST00000347691 IPO4Q8TEX9 1081 aaKnown RBP11.36□□□□□ -0.59
TRAPPC6B-202ENST00000347691 COG1Q8WTW3 980 aa11.36□□□□□ -0.59
TRAPPC6B-202ENST00000347691 SMARCC1Q92922 1105 aaPredicted RBP11.36□□□□□ -0.59
TRAPPC6B-202ENST00000347691 GNL3LQ9NVN8 582 aaKnown RBP11.36□□□□□ -0.59
TRAPPC6B-202ENST00000347691 PDS5AQ29RF7 1337 aaKnown RBP11.36□□□□□ -0.59
TRAPPC6B-202ENST00000347691 DUOX1Q9NRD9 1551 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms