RNA–Protein interactions for RNA: ENST00000347662.8

TRAF3-201, Transcript of TNF receptor associated factor 3, humanhuman

TSL 5 BASIC

Gene TRAF3, Length 7,700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-201ENST00000347662 ZBBXA8MT70 800 aa13□□□□□ -0.33
TRAF3-201ENST00000347662 DNAJC8O75937 253 aaPredicted RBP13□□□□□ -0.33
TRAF3-201ENST00000347662 TTLL7Q6ZT98 887 aa13□□□□□ -0.33
TRAF3-201ENST00000347662 KRT12Q99456 494 aa13□□□□□ -0.33
TRAF3-201ENST00000347662 PLCB1Q9NQ66 1216 aa13□□□□□ -0.33
TRAF3-201ENST00000347662 CFAP43Q8NDM7 1665 aa13□□□□□ -0.33
TRAF3-201ENST00000347662 SLC13A4Q9UKG4 626 aa13□□□□□ -0.33
TRAF3-201ENST00000347662 CCNT1O60563 726 aaKnown RBP13□□□□□ -0.33
TRAF3-201ENST00000347662 TCIRG1Q13488 830 aa13□□□□□ -0.33
TRAF3-201ENST00000347662 USH1GQ495M9 461 aa13□□□□□ -0.33
TRAF3-201ENST00000347662 FAM196AQ6ZSG2 479 aa13□□□□□ -0.33
TRAF3-201ENST00000347662 PNMA8AQ86V59 439 aaPredicted RBP13□□□□□ -0.33
TRAF3-201ENST00000347662 TGFBRAP1Q8WUH2 860 aa13□□□□□ -0.33
TRAF3-201ENST00000347662 SH2D4AQ9H788 454 aa13□□□□□ -0.33
TRAF3-201ENST00000347662 SERPINB6P35237 376 aa12.99□□□□□ -0.33
TRAF3-201ENST00000347662 SCNN1DP51172 638 aa12.99□□□□□ -0.33
TRAF3-201ENST00000347662 KRT27Q7Z3Y8 459 aa12.99□□□□□ -0.33
TRAF3-201ENST00000347662 SUPT20HQ8NEM7 779 aa12.99□□□□□ -0.33
TRAF3-201ENST00000347662 NBPF3Q9H094 633 aa12.99□□□□□ -0.33
TRAF3-201ENST00000347662 DNMT1P26358 1616 aaKnown RBP12.99□□□□□ -0.33
TRAF3-201ENST00000347662 ECE1P42892 770 aa12.99□□□□□ -0.33
TRAF3-201ENST00000347662 SESN3P58005 492 aa12.99□□□□□ -0.33
TRAF3-201ENST00000347662 IQCB1Q15051 598 aa12.99□□□□□ -0.33
TRAF3-201ENST00000347662 MFSD14BQ5SR56 506 aa12.99□□□□□ -0.33
TRAF3-201ENST00000347662 SV2BQ7L1I2 683 aa12.99□□□□□ -0.33
TRAF3-201ENST00000347662 SZRD1Q7Z422 152 aa12.99□□□□□ -0.33
TRAF3-201ENST00000347662 AFAP1L1Q8TED9 768 aa12.99□□□□□ -0.33
TRAF3-201ENST00000347662 SUCLG2Q96I99 432 aa12.99□□□□□ -0.33
TRAF3-201ENST00000347662 ZNF277Q9NRM2 450 aaPredicted RBP12.99□□□□□ -0.33
TRAF3-201ENST00000347662 KRT82Q9NSB4 513 aa12.99□□□□□ -0.33
TRAF3-201ENST00000347662 SYNJ2BP-COX16A0A087WUM0 186 aa12.99□□□□□ -0.33
TRAF3-201ENST00000347662 CREB3L3Q68CJ9 461 aa12.99□□□□□ -0.33
TRAF3-201ENST00000347662 HDXQ7Z353 690 aa12.99□□□□□ -0.33
TRAF3-201ENST00000347662 SESTD1Q86VW0 696 aa12.99□□□□□ -0.33
TRAF3-201ENST00000347662 COX16Q9P0S2 106 aa12.99□□□□□ -0.33
TRAF3-201ENST00000347662 ARHGAP4P98171 946 aa12.99□□□□□ -0.33
TRAF3-201ENST00000347662 TNNI3KQ59H18 835 aa12.99□□□□□ -0.33
TRAF3-201ENST00000347662 CDC26Q8NHZ8 85 aa12.99□□□□□ -0.33
TRAF3-201ENST00000347662 NOC4LQ9BVI4 516 aaKnown RBP12.99□□□□□ -0.33
TRAF3-201ENST00000347662 FPGT-TNNI3KV9GXZ4 949 aa12.99□□□□□ -0.33
TRAF3-201ENST00000347662 USP19O94966 1318 aa12.99□□□□□ -0.33
TRAF3-201ENST00000347662 ERVV-2B6SEH9 535 aa12.99□□□□□ -0.33
TRAF3-201ENST00000347662 SORBS3O60504 671 aa12.99□□□□□ -0.33
TRAF3-201ENST00000347662 IRX4P78413 519 aa12.99□□□□□ -0.33
TRAF3-201ENST00000347662 USPL1Q5W0Q7 1092 aa12.98□□□□□ -0.33
TRAF3-201ENST00000347662 CEP19Q96LK0 163 aa12.98□□□□□ -0.33
TRAF3-201ENST00000347662 METTL14Q9HCE5 456 aaKnown RBP12.98□□□□□ -0.33
TRAF3-201ENST00000347662 RTL1A6NKG5 1358 aa12.98□□□□□ -0.33
TRAF3-201ENST00000347662 TRIM75PA6NK02 468 aa12.98□□□□□ -0.33
TRAF3-201ENST00000347662 PHKG2P15735 406 aa12.98□□□□□ -0.33
TRAF3-201ENST00000347662 GNA11P29992 359 aa12.98□□□□□ -0.33
TRAF3-201ENST00000347662 ATP6V1E2Q96A05 226 aa12.98□□□□□ -0.33
TRAF3-201ENST00000347662 RMDN2Q96LZ7 410 aa12.98□□□□□ -0.33
TRAF3-201ENST00000347662 TRIM55Q9BYV6 548 aa12.98□□□□□ -0.33
TRAF3-201ENST00000347662 EXOC7Q9UPT5 735 aa12.98□□□□□ -0.33
TRAF3-201ENST00000347662 CPA1P15085 419 aa12.98□□□□□ -0.33
TRAF3-201ENST00000347662 GSTA4O15217 222 aa12.98□□□□□ -0.33
TRAF3-201ENST00000347662 TTC4O95801 387 aa12.98□□□□□ -0.33
TRAF3-201ENST00000347662 LETM2Q2VYF4 491 aa12.98□□□□□ -0.33
TRAF3-201ENST00000347662 SHANK2Q9UPX8 1470 aa12.98□□□□□ -0.33
TRAF3-201ENST00000347662 GTPBP10A4D1E9 387 aaKnown RBP12.98□□□□□ -0.33
TRAF3-201ENST00000347662 ARHGEF35A5YM69 484 aa12.98□□□□□ -0.33
TRAF3-201ENST00000347662 GPIHBP1Q8IV16 184 aa12.98□□□□□ -0.33
TRAF3-201ENST00000347662 MCUQ8NE86 351 aa12.98□□□□□ -0.33
TRAF3-201ENST00000347662 TTC41PQ6P2S7 1318 aa12.98□□□□□ -0.33
TRAF3-201ENST00000347662 PAGR1Q9BTK6 254 aa12.98□□□□□ -0.33
TRAF3-201ENST00000347662 IPO11Q9UI26 975 aaKnown RBP12.98□□□□□ -0.33
TRAF3-201ENST00000347662 RTL9Q8NET4 1388 aa12.98□□□□□ -0.33
TRAF3-201ENST00000347662 MAP3K21Q5TCX8 1036 aa12.97□□□□□ -0.33
TRAF3-201ENST00000347662 NSMFQ6X4W1 530 aa12.97□□□□□ -0.33
TRAF3-201ENST00000347662 RAPH1Q70E73 1250 aa12.97□□□□□ -0.33
TRAF3-201ENST00000347662 N4BP2L2Q92802 583 aaPredicted RBP12.97□□□□□ -0.33
TRAF3-201ENST00000347662 CSADQ9Y600 493 aa12.97□□□□□ -0.33
TRAF3-201ENST00000347662 GCKRQ14397 625 aa12.97□□□□□ -0.33
TRAF3-201ENST00000347662 CCDC105Q8IYK2 499 aa12.97□□□□□ -0.33
TRAF3-201ENST00000347662 ANKRD42Q8N9B4 389 aa12.97□□□□□ -0.33
TRAF3-201ENST00000347662 ALKBH8Q96BT7 664 aaKnown RBP12.97□□□□□ -0.33
TRAF3-201ENST00000347662 MMS19Q96T76 1030 aa12.97□□□□□ -0.33
TRAF3-201ENST00000347662 EIF2AQ9BY44 585 aaKnown RBP12.97□□□□□ -0.33
TRAF3-201ENST00000347662 NEO1Q92859 1461 aa12.97□□□□□ -0.33
TRAF3-201ENST00000347662 GPAA1O43292 621 aa12.97□□□□□ -0.33
TRAF3-201ENST00000347662 ZBTB17Q13105 803 aa12.97□□□□□ -0.33
TRAF3-201ENST00000347662 WHAMMP3Q1A5X7 153 aa12.97□□□□□ -0.33
TRAF3-201ENST00000347662 RSBN1LQ6PCB5 846 aaPredicted RBP12.97□□□□□ -0.33
TRAF3-201ENST00000347662 FAM186BQ8IYM0 893 aa12.97□□□□□ -0.33
TRAF3-201ENST00000347662 LPIN2Q92539 896 aa12.97□□□□□ -0.33
TRAF3-201ENST00000347662 GOLGA8CPA6NN73 597 aa12.97□□□□□ -0.33
TRAF3-201ENST00000347662 NDUFAB1O14561 156 aa12.97□□□□□ -0.33
TRAF3-201ENST00000347662 P4HA1P13674 534 aa12.97□□□□□ -0.33
TRAF3-201ENST00000347662 SLC7A5P2Q9GIP4 190 aa12.97□□□□□ -0.33
TRAF3-201ENST00000347662 DNAJC25Q9H1X3 360 aa12.97□□□□□ -0.33
TRAF3-201ENST00000347662 PARD3Q8TEW0 1356 aa12.97□□□□□ -0.33
TRAF3-201ENST00000347662 CHD1O14646 1710 aa12.97□□□□□ -0.33
TRAF3-201ENST00000347662 MAPKBP1O60336 1514 aa12.97□□□□□ -0.33
TRAF3-201ENST00000347662 SLC1A4P43007 532 aa12.97□□□□□ -0.33
TRAF3-201ENST00000347662 C8orf74Q6P047 294 aa12.97□□□□□ -0.33
TRAF3-201ENST00000347662 HELLSQ9NRZ9 838 aa12.97□□□□□ -0.33
TRAF3-201ENST00000347662 TBC1D7Q9P0N9 293 aa12.97□□□□□ -0.33
TRAF3-201ENST00000347662 PRKAG2Q9UGJ0 569 aa12.97□□□□□ -0.33
TRAF3-201ENST00000347662 TCP10L2B9ZVM9 353 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms