RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 U2AF1L4Q8WU68 220 aaKnown RBP13.33□□□□□ -0.28
COL12A1-202ENST00000345356 APPBP2Q92624 585 aa13.33□□□□□ -0.28
COL12A1-202ENST00000345356 EDC3Q96F86 508 aaKnown RBP13.33□□□□□ -0.28
COL12A1-202ENST00000345356 PRDM4Q9UKN5 801 aa13.33□□□□□ -0.28
COL12A1-202ENST00000345356 COBLO75128 1261 aa13.33□□□□□ -0.28
COL12A1-202ENST00000345356 GNPTABQ3T906 1256 aa13.33□□□□□ -0.28
COL12A1-202ENST00000345356 CAPRIN2Q6IMN6 1127 aaKnown RBP13.33□□□□□ -0.28
COL12A1-202ENST00000345356 SLF2Q8IX21 1173 aa13.33□□□□□ -0.28
COL12A1-202ENST00000345356 PARP9Q8IXQ6 854 aa13.33□□□□□ -0.28
COL12A1-202ENST00000345356 IFNL2Q8IZJ0 200 aa13.33□□□□□ -0.28
COL12A1-202ENST00000345356 ZNF710Q8N1W2 664 aa13.33□□□□□ -0.28
COL12A1-202ENST00000345356 DSCC1Q9BVC3 393 aa13.33□□□□□ -0.28
COL12A1-202ENST00000345356 C19orf44Q9H6X5 657 aa13.33□□□□□ -0.28
COL12A1-202ENST00000345356 NDC80O14777 642 aa13.33□□□□□ -0.28
COL12A1-202ENST00000345356 CCNT1O60563 726 aaKnown RBP13.33□□□□□ -0.28
COL12A1-202ENST00000345356 KRT5P13647 590 aa13.33□□□□□ -0.28
COL12A1-202ENST00000345356 TOGARAM2Q6ZUX3 1019 aa13.33□□□□□ -0.28
COL12A1-202ENST00000345356 LRRC8CQ8TDW0 803 aa13.33□□□□□ -0.28
COL12A1-202ENST00000345356 IRX1P78414 480 aaPredicted RBP13.33□□□□□ -0.28
COL12A1-202ENST00000345356 FBXW10Q5XX13 1052 aa13.33□□□□□ -0.28
COL12A1-202ENST00000345356 TTC16Q8NEE8 873 aa13.33□□□□□ -0.28
COL12A1-202ENST00000345356 P3H4Q92791 437 aa13.33□□□□□ -0.28
COL12A1-202ENST00000345356 BCAP29Q9UHQ4 241 aa13.33□□□□□ -0.28
COL12A1-202ENST00000345356 TCOF1Q13428 1488 aaKnown RBP13.32□□□□□ -0.28
COL12A1-202ENST00000345356 THAP12O43422 761 aa13.32□□□□□ -0.28
COL12A1-202ENST00000345356 TXKP42681 527 aa13.32□□□□□ -0.28
COL12A1-202ENST00000345356 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.32□□□□□ -0.28
COL12A1-202ENST00000345356 AKNAD1Q5T1N1 836 aa13.32□□□□□ -0.28
COL12A1-202ENST00000345356 KIFAP3Q92845 792 aa13.32□□□□□ -0.28
COL12A1-202ENST00000345356 IMPG2Q9BZV3 1241 aa13.32□□□□□ -0.28
COL12A1-202ENST00000345356 KLC4Q9NSK0 619 aa13.32□□□□□ -0.28
COL12A1-202ENST00000345356 THEGQ9P2T0 379 aa13.32□□□□□ -0.28
COL12A1-202ENST00000345356 ABCA10Q8WWZ4 1543 aa13.32□□□□□ -0.28
COL12A1-202ENST00000345356 LARGE1O95461 756 aa13.32□□□□□ -0.28
COL12A1-202ENST00000345356 SERPINB6P35237 376 aa13.32□□□□□ -0.28
COL12A1-202ENST00000345356 MYO1EQ12965 1108 aa13.32□□□□□ -0.28
COL12A1-202ENST00000345356 PANX2Q96RD6 677 aa13.32□□□□□ -0.28
COL12A1-202ENST00000345356 ATP8A1Q9Y2Q0 1164 aa13.32□□□□□ -0.28
COL12A1-202ENST00000345356 NAA35Q5VZE5 725 aa13.32□□□□□ -0.28
COL12A1-202ENST00000345356 EMBQ6PCB8 327 aa13.32□□□□□ -0.28
COL12A1-202ENST00000345356 NELFCDQ8IXH7 590 aa13.32□□□□□ -0.28
COL12A1-202ENST00000345356 CNPY4Q8N129 248 aa13.32□□□□□ -0.28
COL12A1-202ENST00000345356 OSBPL3Q9H4L5 887 aa13.32□□□□□ -0.28
COL12A1-202ENST00000345356 TXLNGQ9NUQ3 528 aa13.32□□□□□ -0.28
COL12A1-202ENST00000345356 CALUO43852 315 aaPredicted RBP13.32□□□□□ -0.28
COL12A1-202ENST00000345356 ABCB4P21439 1286 aa13.32□□□□□ -0.28
COL12A1-202ENST00000345356 ITIH3Q06033 890 aa13.32□□□□□ -0.28
COL12A1-202ENST00000345356 FAM167BQ9BTA0 163 aa13.32□□□□□ -0.28
COL12A1-202ENST00000345356 TBC1D7Q9P0N9 293 aa13.32□□□□□ -0.28
COL12A1-202ENST00000345356 VPS54Q9P1Q0 977 aa13.32□□□□□ -0.28
COL12A1-202ENST00000345356 MAP3K5Q99683 1374 aa13.32□□□□□ -0.28
COL12A1-202ENST00000345356 CUL7Q14999 1698 aa13.31□□□□□ -0.28
COL12A1-202ENST00000345356 IL9RQ01113 521 aa13.31□□□□□ -0.28
COL12A1-202ENST00000345356 GMNNO75496 209 aa13.31□□□□□ -0.28
COL12A1-202ENST00000345356 SLC39A14Q15043 492 aa13.31□□□□□ -0.28
COL12A1-202ENST00000345356 AKAP4Q5JQC9 854 aa13.31□□□□□ -0.28
COL12A1-202ENST00000345356 CTIFO43310 598 aaKnown RBP13.31□□□□□ -0.28
COL12A1-202ENST00000345356 MAP3K7O43318 606 aa13.31□□□□□ -0.28
COL12A1-202ENST00000345356 ELF1P32519 619 aa13.31□□□□□ -0.28
COL12A1-202ENST00000345356 CABP7Q86V35 215 aa13.31□□□□□ -0.28
COL12A1-202ENST00000345356 MAK16Q9BXY0 300 aaKnown RBP13.31□□□□□ -0.28
COL12A1-202ENST00000345356 YY1AP1Q9H869 796 aa13.31□□□□□ -0.28
COL12A1-202ENST00000345356 AMOTL2Q9Y2J4 779 aa13.31□□□□□ -0.28
COL12A1-202ENST00000345356 THEMISQ8N1K5 641 aaPredicted RBP13.31□□□□□ -0.28
COL12A1-202ENST00000345356 PDCD7Q8N8D1 485 aaKnown RBP13.31□□□□□ -0.28
COL12A1-202ENST00000345356 SAMSN1Q9NSI8 373 aaKnown RBP13.31□□□□□ -0.28
COL12A1-202ENST00000345356 PZPP20742 1482 aa13.31□□□□□ -0.28
COL12A1-202ENST00000345356 hCG_1642624A0A1W2PR95 340 aa13.31□□□□□ -0.28
COL12A1-202ENST00000345356 PDE6BP35913 854 aa13.31□□□□□ -0.28
COL12A1-202ENST00000345356 FNBP4Q8N3X1 1017 aaPredicted RBP13.31□□□□□ -0.28
COL12A1-202ENST00000345356 SSH3Q8TE77 659 aa13.31□□□□□ -0.28
COL12A1-202ENST00000345356 WHAMMQ8TF30 809 aa13.31□□□□□ -0.28
COL12A1-202ENST00000345356 HAUS1Q96CS2 278 aa13.31□□□□□ -0.28
COL12A1-202ENST00000345356 POLR3EQ9NVU0 708 aa13.31□□□□□ -0.28
COL12A1-202ENST00000345356 DHX9Q08211 1270 aaKnown RBP13.3□□□□□ -0.28
COL12A1-202ENST00000345356 HERC4Q5GLZ8 1057 aaPredicted RBP13.3□□□□□ -0.28
COL12A1-202ENST00000345356 LGSNQ5TDP6 509 aa13.3□□□□□ -0.28
COL12A1-202ENST00000345356 STAP2Q9UGK3 403 aa13.3□□□□□ -0.28
COL12A1-202ENST00000345356 VPS41P49754 854 aa13.3□□□□□ -0.28
COL12A1-202ENST00000345356 CCDC14Q49A88 953 aa13.3□□□□□ -0.28
COL12A1-202ENST00000345356 TMOD2Q9NZR1 351 aa13.3□□□□□ -0.28
COL12A1-202ENST00000345356 ZDHHC9Q9Y397 364 aa13.3□□□□□ -0.28
COL12A1-202ENST00000345356 TRAPPC8Q9Y2L5 1435 aa13.3□□□□□ -0.28
COL12A1-202ENST00000345356 B4DLN1 442 aa13.3□□□□□ -0.28
COL12A1-202ENST00000345356 PDIA3P30101 505 aaKnown RBP13.3□□□□□ -0.28
COL12A1-202ENST00000345356 ADCY8P40145 1251 aa13.3□□□□□ -0.28
COL12A1-202ENST00000345356 OSBPL5Q9H0X9 879 aaPredicted RBP13.3□□□□□ -0.28
COL12A1-202ENST00000345356 MRPS25P82663 173 aaKnown RBP13.3□□□□□ -0.28
COL12A1-202ENST00000345356 GSPT2Q8IYD1 628 aaKnown RBP13.3□□□□□ -0.28
COL12A1-202ENST00000345356 GEMIN8Q9NWZ8 242 aaKnown RBP13.3□□□□□ -0.28
COL12A1-202ENST00000345356 NFU1Q9UMS0 254 aa13.3□□□□□ -0.28
COL12A1-202ENST00000345356 EIF4E1BA6NMX2 242 aaKnown RBP13.29□□□□□ -0.28
COL12A1-202ENST00000345356 GTPBP6O43824 516 aaPredicted RBP13.29□□□□□ -0.28
COL12A1-202ENST00000345356 TADA3O75528 432 aa13.29□□□□□ -0.28
COL12A1-202ENST00000345356 ZWINTO95229 277 aa13.29□□□□□ -0.28
COL12A1-202ENST00000345356 NDUFA10O95299 355 aa13.29□□□□□ -0.28
COL12A1-202ENST00000345356 PDHA1P08559 390 aa13.29□□□□□ -0.28
COL12A1-202ENST00000345356 IL13P35225 146 aa13.29□□□□□ -0.28
COL12A1-202ENST00000345356 ADD1P35611 737 aaKnown RBP13.29□□□□□ -0.28
COL12A1-202ENST00000345356 LINC00301Q8NCQ3 95 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms