RNA–Protein interactions for RNA: ENST00000345317.6

SKAP2-201, Transcript of src kinase associated phosphoprotein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKAP2, Length 3,998 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKAP2-201ENST00000345317 NRBP1Q9UHY1 535 aa9.81□□□□□ -0.84
SKAP2-201ENST00000345317 FLT1P17948 1338 aa9.8□□□□□ -0.84
SKAP2-201ENST00000345317 CCT6AP40227 531 aaKnown RBP9.8□□□□□ -0.84
SKAP2-201ENST00000345317 IRX3P78415 501 aaPredicted RBP9.8□□□□□ -0.84
SKAP2-201ENST00000345317 LRMPQ12912 555 aa9.8□□□□□ -0.84
SKAP2-201ENST00000345317 SUPT20HQ8NEM7 779 aa9.8□□□□□ -0.84
SKAP2-201ENST00000345317 PCDHAC2Q9Y5I4 1007 aa9.8□□□□□ -0.84
SKAP2-201ENST00000345317 N4BP3O15049 544 aa9.8□□□□□ -0.84
SKAP2-201ENST00000345317 GH2P01242 217 aa9.8□□□□□ -0.84
SKAP2-201ENST00000345317 CMA1P23946 247 aa9.8□□□□□ -0.84
SKAP2-201ENST00000345317 ADCY7P51828 1080 aa9.8□□□□□ -0.84
SKAP2-201ENST00000345317 SEPT2Q15019 361 aa9.8□□□□□ -0.84
SKAP2-201ENST00000345317 POSTNQ15063 836 aa9.8□□□□□ -0.84
SKAP2-201ENST00000345317 PPP2R5BQ15173 497 aa9.8□□□□□ -0.84
SKAP2-201ENST00000345317 ALDH8A1Q9H2A2 487 aaPredicted RBP9.8□□□□□ -0.84
SKAP2-201ENST00000345317 POLR3EQ9NVU0 708 aa9.8□□□□□ -0.84
SKAP2-201ENST00000345317 DDX39AO00148 427 aaKnown RBP9.8□□□□□ -0.84
SKAP2-201ENST00000345317 FOXN1O15353 648 aa9.8□□□□□ -0.84
SKAP2-201ENST00000345317 FOXP2O15409 715 aa9.8□□□□□ -0.84
SKAP2-201ENST00000345317 CBFA2T2O43439 604 aa9.8□□□□□ -0.84
SKAP2-201ENST00000345317 WDHD1O75717 1129 aaPredicted RBP9.8□□□□□ -0.84
SKAP2-201ENST00000345317 MRPL12P52815 198 aaKnown RBP9.8□□□□□ -0.84
SKAP2-201ENST00000345317 CCDC93Q567U6 631 aa9.8□□□□□ -0.84
SKAP2-201ENST00000345317 CLEC17AQ6ZS10 378 aa9.8□□□□□ -0.84
SKAP2-201ENST00000345317 PODNQ7Z5L7 613 aa9.8□□□□□ -0.84
SKAP2-201ENST00000345317 ZNF408Q9H9D4 720 aa9.8□□□□□ -0.84
SKAP2-201ENST00000345317 TBC1D7Q9P0N9 293 aa9.8□□□□□ -0.84
SKAP2-201ENST00000345317 AFDNP55196 1824 aaKnown RBP9.79□□□□□ -0.84
SKAP2-201ENST00000345317 BMP15O95972 392 aa9.79□□□□□ -0.84
SKAP2-201ENST00000345317 SKILP12757 684 aa9.79□□□□□ -0.84
SKAP2-201ENST00000345317 KANK3Q6NY19 840 aa9.79□□□□□ -0.84
SKAP2-201ENST00000345317 TMC4Q7Z404 712 aa9.79□□□□□ -0.84
SKAP2-201ENST00000345317 PCDHA1Q9Y5I3 950 aa9.79□□□□□ -0.84
SKAP2-201ENST00000345317 TBC1D10BQ4KMP7 808 aaPredicted RBP9.79□□□□□ -0.84
SKAP2-201ENST00000345317 TTBK2Q6IQ55 1244 aa9.79□□□□□ -0.84
SKAP2-201ENST00000345317 USP49Q70CQ1 688 aa9.79□□□□□ -0.84
SKAP2-201ENST00000345317 CLEC11AQ9Y240 323 aa9.79□□□□□ -0.84
SKAP2-201ENST00000345317 FAM170AA1A519 330 aa9.79□□□□□ -0.84
SKAP2-201ENST00000345317 TTLL1O95922 423 aa9.79□□□□□ -0.84
SKAP2-201ENST00000345317 MTIF2P46199 727 aaKnown RBP9.79□□□□□ -0.84
SKAP2-201ENST00000345317 GRIN1Q05586 938 aa9.79□□□□□ -0.84
SKAP2-201ENST00000345317 NOM1Q5C9Z4 860 aaKnown RBP9.79□□□□□ -0.84
SKAP2-201ENST00000345317 PRAMEF18Q5VWM3 479 aa9.79□□□□□ -0.84
SKAP2-201ENST00000345317 KRT79Q5XKE5 535 aa9.79□□□□□ -0.84
SKAP2-201ENST00000345317 CC2D2BQ6DHV5 1058 aa9.79□□□□□ -0.84
SKAP2-201ENST00000345317 EXOC1Q9NV70 894 aa9.79□□□□□ -0.84
SKAP2-201ENST00000345317 NFE2L3Q9Y4A8 694 aa9.79□□□□□ -0.84
SKAP2-201ENST00000345317 PRPF3O43395 683 aaKnown RBP9.78□□□□□ -0.84
SKAP2-201ENST00000345317 ZNF500O60304 480 aaPredicted RBP9.78□□□□□ -0.84
SKAP2-201ENST00000345317 SORBS3O60504 671 aa9.78□□□□□ -0.84
SKAP2-201ENST00000345317 DPEP1P16444 411 aa9.78□□□□□ -0.84
SKAP2-201ENST00000345317 CDC42EP5Q6NZY7 148 aa9.78□□□□□ -0.84
SKAP2-201ENST00000345317 PROM2Q8N271 834 aa9.78□□□□□ -0.84
SKAP2-201ENST00000345317 PRIMPOLQ96LW4 560 aa9.78□□□□□ -0.84
SKAP2-201ENST00000345317 VPS16Q9H269 839 aa9.78□□□□□ -0.84
SKAP2-201ENST00000345317 FOXP1Q9H334 677 aaPredicted RBP9.78□□□□□ -0.84
SKAP2-201ENST00000345317 CTNND2Q9UQB3 1225 aa9.78□□□□□ -0.84
SKAP2-201ENST00000345317 KDM3BQ7LBC6 1761 aa9.78□□□□□ -0.84
SKAP2-201ENST00000345317 STRCQ7RTU9 1775 aa9.78□□□□□ -0.84
SKAP2-201ENST00000345317 TM4SF1P30408 202 aa9.78□□□□□ -0.84
SKAP2-201ENST00000345317 MYL5Q02045 173 aa9.78□□□□□ -0.84
SKAP2-201ENST00000345317 KRBA2Q6ZNG9 492 aa9.78□□□□□ -0.84
SKAP2-201ENST00000345317 MAEAQ7L5Y9 396 aa9.78□□□□□ -0.84
SKAP2-201ENST00000345317 NBPF11Q86T75 865 aa9.78□□□□□ -0.84
SKAP2-201ENST00000345317 DGKHQ86XP1 1220 aa9.78□□□□□ -0.84
SKAP2-201ENST00000345317 CERS3Q8IU89 383 aa9.78□□□□□ -0.84
SKAP2-201ENST00000345317 MMRN2Q9H8L6 949 aa9.78□□□□□ -0.84
SKAP2-201ENST00000345317 PSTPIP2Q9H939 334 aa9.78□□□□□ -0.84
SKAP2-201ENST00000345317 TMEM260Q9NX78 707 aa9.78□□□□□ -0.84
SKAP2-201ENST00000345317 LRWD1Q9UFC0 647 aa9.78□□□□□ -0.84
SKAP2-201ENST00000345317 PARP4Q9UKK3 1724 aaKnown RBP9.78□□□□□ -0.84
SKAP2-201ENST00000345317 PP2D1A8MPX8 630 aa9.78□□□□□ -0.84
SKAP2-201ENST00000345317 PCP11498 1178 aaKnown RBP9.78□□□□□ -0.84
SKAP2-201ENST00000345317 POTEAQ6S8J7 498 aa9.78□□□□□ -0.84
SKAP2-201ENST00000345317 NSMFQ6X4W1 530 aa9.78□□□□□ -0.84
SKAP2-201ENST00000345317 TBCKQ8TEA7 893 aa9.78□□□□□ -0.84
SKAP2-201ENST00000345317 ARHGEF10LQ9HCE6 1279 aa9.78□□□□□ -0.84
SKAP2-201ENST00000345317 PI4KBQ9UBF8 816 aa9.78□□□□□ -0.84
SKAP2-201ENST00000345317 SCN11AQ9UI33 1791 aa9.78□□□□□ -0.84
SKAP2-201ENST00000345317 SLIT2O94813 1529 aa9.77□□□□□ -0.84
SKAP2-201ENST00000345317 LRRC37A3O60309 1634 aa9.77□□□□□ -0.84
SKAP2-201ENST00000345317 NEMFO60524 1076 aa9.77□□□□□ -0.84
SKAP2-201ENST00000345317 ZSCAN20P17040 1043 aaPredicted RBP9.77□□□□□ -0.84
SKAP2-201ENST00000345317 RASA1P20936 1047 aa9.77□□□□□ -0.84
SKAP2-201ENST00000345317 GOLGA8FQ08AF8 430 aa9.77□□□□□ -0.84
SKAP2-201ENST00000345317 GOLGA8DPQ0D2H9 430 aa9.77□□□□□ -0.84
SKAP2-201ENST00000345317 NOLC1Q14978 699 aaKnown RBP eCLIP9.77□□□□□ -0.84
SKAP2-201ENST00000345317 DALRD3Q5D0E6 543 aaKnown RBP9.77□□□□□ -0.84
SKAP2-201ENST00000345317 TMEM87AQ8NBN3 555 aa9.77□□□□□ -0.84
SKAP2-201ENST00000345317 C5P01031 1676 aa9.77□□□□□ -0.85
SKAP2-201ENST00000345317 ZBTB22O15209 634 aa9.77□□□□□ -0.85
SKAP2-201ENST00000345317 VEGFAP15692 232 aaPredicted RBP9.77□□□□□ -0.85
SKAP2-201ENST00000345317 ZNF75DP51815 510 aa9.77□□□□□ -0.85
SKAP2-201ENST00000345317 GRM1Q13255 1194 aa9.77□□□□□ -0.85
SKAP2-201ENST00000345317 CALCRLQ16602 461 aa9.77□□□□□ -0.85
SKAP2-201ENST00000345317 TCERG1LQ5VWI1 586 aa9.77□□□□□ -0.85
SKAP2-201ENST00000345317 MYRIPQ8NFW9 859 aa9.77□□□□□ -0.85
SKAP2-201ENST00000345317 SNX29Q8TEQ0 813 aa9.77□□□□□ -0.85
SKAP2-201ENST00000345317 ZBTB9Q96C00 473 aa9.77□□□□□ -0.85
SKAP2-201ENST00000345317 XPO4Q9C0E2 1151 aaKnown RBP9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms