RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 TOP1P11387 765 aaKnown RBP13.91□□□□□ -0.18
SNCA-202ENST00000345009 PSMA5P28066 241 aa13.91□□□□□ -0.18
SNCA-202ENST00000345009 HOXA7P31268 230 aaPredicted RBP13.91□□□□□ -0.18
SNCA-202ENST00000345009 USP17L24Q0WX57 530 aa13.91□□□□□ -0.18
SNCA-202ENST00000345009 SIAH1Q8IUQ4 282 aa13.91□□□□□ -0.18
SNCA-202ENST00000345009 FAM43AQ8N2R8 423 aa13.91□□□□□ -0.18
SNCA-202ENST00000345009 SMCR8Q8TEV9 937 aaPredicted RBP13.91□□□□□ -0.18
SNCA-202ENST00000345009 ZSCAN10Q96SZ4 725 aaPredicted RBP13.91□□□□□ -0.18
SNCA-202ENST00000345009 MTA3Q9BTC8 594 aa13.91□□□□□ -0.18
SNCA-202ENST00000345009 USP26Q9BXU7 913 aa13.91□□□□□ -0.18
SNCA-202ENST00000345009 MFRPQ9BY79 579 aa13.91□□□□□ -0.18
SNCA-202ENST00000345009 UPF2Q9HAU5 1272 aaKnown RBP13.91□□□□□ -0.18
SNCA-202ENST00000345009 IL17RBQ9NRM6 502 aa13.91□□□□□ -0.18
SNCA-202ENST00000345009 ATAD5Q96QE3 1844 aa13.91□□□□□ -0.18
SNCA-202ENST00000345009 F5H6K3 240 aa13.9□□□□□ -0.18
SNCA-202ENST00000345009 IFIT3O14879 490 aaKnown RBP13.9□□□□□ -0.18
SNCA-202ENST00000345009 KLRC3Q07444 240 aa13.9□□□□□ -0.18
SNCA-202ENST00000345009 MOGSQ13724 837 aa13.9□□□□□ -0.18
SNCA-202ENST00000345009 GPAT2Q6NUI2 795 aa13.9□□□□□ -0.18
SNCA-202ENST00000345009 CLEC10AQ8IUN9 316 aa13.9□□□□□ -0.18
SNCA-202ENST00000345009 TMTC2Q8N394 836 aa13.9□□□□□ -0.18
SNCA-202ENST00000345009 SLAIN1Q8ND83 568 aa13.9□□□□□ -0.18
SNCA-202ENST00000345009 GMCL1P1Q8NEA9 526 aa13.9□□□□□ -0.18
SNCA-202ENST00000345009 GTF3C2Q8WUA4 911 aaPredicted RBP13.9□□□□□ -0.18
SNCA-202ENST00000345009 NEK1Q96PY6 1258 aa13.9□□□□□ -0.18
SNCA-202ENST00000345009 CFHR5Q9BXR6 569 aa13.9□□□□□ -0.18
SNCA-202ENST00000345009 KAT14Q9H8E8 782 aa13.9□□□□□ -0.18
SNCA-202ENST00000345009 HOXC10Q9NYD6 342 aa13.9□□□□□ -0.18
SNCA-202ENST00000345009 TACC3Q9Y6A5 838 aa13.9□□□□□ -0.18
SNCA-202ENST00000345009 WDR46O15213 610 aaKnown RBP13.89□□□□□ -0.19
SNCA-202ENST00000345009 NMT2O60551 498 aa13.89□□□□□ -0.19
SNCA-202ENST00000345009 VCAM1P19320 739 aa13.89□□□□□ -0.19
SNCA-202ENST00000345009 GCLCP48506 637 aaPredicted RBP13.89□□□□□ -0.19
SNCA-202ENST00000345009 CTCFP49711 727 aaPredicted RBP13.89□□□□□ -0.19
SNCA-202ENST00000345009 IFIT1BQ5T764 474 aaKnown RBP13.89□□□□□ -0.19
SNCA-202ENST00000345009 SPICE1Q8N0Z3 855 aa13.89□□□□□ -0.19
SNCA-202ENST00000345009 TMEM87BQ96K49 555 aa13.89□□□□□ -0.19
SNCA-202ENST00000345009 TANGO6Q9C0B7 1094 aa13.89□□□□□ -0.19
SNCA-202ENST00000345009 ISY1Q9ULR0 285 aaKnown RBP13.89□□□□□ -0.19
SNCA-202ENST00000345009 TLR2O60603 784 aa13.88□□□□□ -0.19
SNCA-202ENST00000345009 HSPA1AP0DMV8 641 aaKnown RBP13.88□□□□□ -0.19
SNCA-202ENST00000345009 HSPA1BP0DMV9 641 aaKnown RBP13.88□□□□□ -0.19
SNCA-202ENST00000345009 SLC1A4P43007 532 aa13.88□□□□□ -0.19
SNCA-202ENST00000345009 NOVP48745 357 aa13.88□□□□□ -0.19
SNCA-202ENST00000345009 FGD1P98174 961 aa13.88□□□□□ -0.19
SNCA-202ENST00000345009 COG2Q14746 738 aa13.88□□□□□ -0.19
SNCA-202ENST00000345009 ARHGEF6Q15052 776 aa13.88□□□□□ -0.19
SNCA-202ENST00000345009 TREML2Q5T2D2 321 aa13.88□□□□□ -0.19
SNCA-202ENST00000345009 SLFN13Q68D06 897 aa13.88□□□□□ -0.19
SNCA-202ENST00000345009 CATSPERGQ6ZRH7 1159 aa13.88□□□□□ -0.19
SNCA-202ENST00000345009 DHX32Q7L7V1 743 aaKnown RBP13.88□□□□□ -0.19
SNCA-202ENST00000345009 ANKS1AQ92625 1134 aa13.88□□□□□ -0.19
SNCA-202ENST00000345009 KCNB2Q92953 911 aa13.88□□□□□ -0.19
SNCA-202ENST00000345009 TMEM47Q9BQJ4 181 aa13.88□□□□□ -0.19
SNCA-202ENST00000345009 ZKSCAN3Q9BRR0 538 aa13.88□□□□□ -0.19
SNCA-202ENST00000345009 ASCC2Q9H1I8 757 aaPredicted RBP13.88□□□□□ -0.19
SNCA-202ENST00000345009 RPAP3Q9H6T3 665 aaPredicted RBP13.88□□□□□ -0.19
SNCA-202ENST00000345009 TNKSO95271 1327 aa13.88□□□□□ -0.19
SNCA-202ENST00000345009 LAMA4Q16363 1823 aa13.87□□□□□ -0.19
SNCA-202ENST00000345009 PRC1O43663 620 aa13.87□□□□□ -0.19
SNCA-202ENST00000345009 TBC1D8O95759 1140 aa13.87□□□□□ -0.19
SNCA-202ENST00000345009 NDUFB10O96000 172 aa13.87□□□□□ -0.19
SNCA-202ENST00000345009 ANAPC15P60006 121 aa13.87□□□□□ -0.19
SNCA-202ENST00000345009 CRHR2Q13324 411 aa13.87□□□□□ -0.19
SNCA-202ENST00000345009 WTAPQ15007 396 aa13.87□□□□□ -0.19
SNCA-202ENST00000345009 NOM1Q5C9Z4 860 aaKnown RBP13.87□□□□□ -0.19
SNCA-202ENST00000345009 TMEM67Q5HYA8 995 aa13.87□□□□□ -0.19
SNCA-202ENST00000345009 RCSD1Q6JBY9 416 aa13.87□□□□□ -0.19
SNCA-202ENST00000345009 BLOC1S2Q6QNY1 142 aa13.87□□□□□ -0.19
SNCA-202ENST00000345009 STOX1Q6ZVD7 989 aa13.87□□□□□ -0.19
SNCA-202ENST00000345009 MB21D2Q8IYB1 491 aaPredicted RBP13.87□□□□□ -0.19
SNCA-202ENST00000345009 LRRC47Q8N1G4 583 aaKnown RBP13.87□□□□□ -0.19
SNCA-202ENST00000345009 ENAHQ8N8S7 591 aaPredicted RBP13.87□□□□□ -0.19
SNCA-202ENST00000345009 FBXO22Q8NEZ5 403 aa13.87□□□□□ -0.19
SNCA-202ENST00000345009 CHURC1Q8WUH1 139 aa13.87□□□□□ -0.19
SNCA-202ENST00000345009 DCAF4Q8WV16 495 aa13.87□□□□□ -0.19
SNCA-202ENST00000345009 GMCL1Q96IK5 515 aa13.87□□□□□ -0.19
SNCA-202ENST00000345009 PHIPQ8WWQ0 1821 aa13.87□□□□□ -0.19
SNCA-202ENST00000345009 WDR19Q8NEZ3 1342 aa13.87□□□□□ -0.19
SNCA-202ENST00000345009 POTEMA6NI47 508 aa13.86□□□□□ -0.19
SNCA-202ENST00000345009 FLOT1O75955 427 aa13.86□□□□□ -0.19
SNCA-202ENST00000345009 BMP3P12645 472 aa13.86□□□□□ -0.19
SNCA-202ENST00000345009 IKQ13123 557 aaPredicted RBP13.86□□□□□ -0.19
SNCA-202ENST00000345009 KIF22Q14807 665 aa13.86□□□□□ -0.19
SNCA-202ENST00000345009 C8orf34Q49A92 452 aa13.86□□□□□ -0.19
SNCA-202ENST00000345009 SYNE3Q6ZMZ3 975 aa13.86□□□□□ -0.19
SNCA-202ENST00000345009 NFXL1Q6ZNB6 911 aa13.86□□□□□ -0.19
SNCA-202ENST00000345009 CYB5R4Q7L1T6 521 aa13.86□□□□□ -0.19
SNCA-202ENST00000345009 CATIPQ7Z7H3 387 aa13.86□□□□□ -0.19
SNCA-202ENST00000345009 PNMA1Q8ND90 353 aa13.86□□□□□ -0.19
SNCA-202ENST00000345009 JAKMIP1Q96N16 626 aaKnown RBP13.86□□□□□ -0.19
SNCA-202ENST00000345009 FEM1BQ9UK73 627 aa13.86□□□□□ -0.19
SNCA-202ENST00000345009 CTDP1Q9Y5B0 961 aaPredicted RBP13.86□□□□□ -0.19
SNCA-202ENST00000345009 SNX14Q9Y5W7 946 aa13.86□□□□□ -0.19
SNCA-202ENST00000345009 TAF6LQ9Y6J9 622 aa13.86□□□□□ -0.19
SNCA-202ENST00000345009 THSD7BQ9C0I4 1608 aa13.86□□□□□ -0.19
SNCA-202ENST00000345009 FDX1P10109 184 aa13.85□□□□□ -0.19
SNCA-202ENST00000345009 CYP2C8P10632 490 aa13.85□□□□□ -0.19
SNCA-202ENST00000345009 LIFRP42702 1097 aa13.85□□□□□ -0.19
SNCA-202ENST00000345009 HERVK_113P62684 666 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms