RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 IRS4O14654 1257 aaPredicted RBP19.94■□□□□ 0.78
SMC4-201ENST00000344722 GPIHBP1Q8IV16 184 aa19.94■□□□□ 0.78
SMC4-201ENST00000344722 CCHCR1Q8TD31 782 aa19.94■□□□□ 0.78
SMC4-201ENST00000344722 VPS54Q9P1Q0 977 aa19.94■□□□□ 0.78
SMC4-201ENST00000344722 HSPD1P10809 573 aaKnown RBP19.93■□□□□ 0.78
SMC4-201ENST00000344722 EVI5O60447 810 aa19.93■□□□□ 0.78
SMC4-201ENST00000344722 HEXIM1O94992 359 aaKnown RBP19.93■□□□□ 0.78
SMC4-201ENST00000344722 RPN1P04843 607 aaKnown RBP19.93■□□□□ 0.78
SMC4-201ENST00000344722 HSPA1LP34931 641 aa19.93■□□□□ 0.78
SMC4-201ENST00000344722 CTDSPL2Q05D32 466 aa19.93■□□□□ 0.78
SMC4-201ENST00000344722 CCDC14Q49A88 953 aa19.93■□□□□ 0.78
SMC4-201ENST00000344722 LIN9Q5TKA1 542 aa19.93■□□□□ 0.78
SMC4-201ENST00000344722 DPH5Q9H2P9 285 aa19.93■□□□□ 0.78
SMC4-201ENST00000344722 STK24Q9Y6E0 443 aa19.93■□□□□ 0.78
SMC4-201ENST00000344722 ERCC3P19447 782 aa19.93■□□□□ 0.78
SMC4-201ENST00000344722 NR1D1P20393 614 aa19.93■□□□□ 0.78
SMC4-201ENST00000344722 MAP3K21Q5TCX8 1036 aa19.93■□□□□ 0.78
SMC4-201ENST00000344722 HAUS7Q99871 368 aa19.93■□□□□ 0.78
SMC4-201ENST00000344722 NAA30Q147X3 362 aaPredicted RBP19.93■□□□□ 0.78
SMC4-201ENST00000344722 RPUSD2Q8IZ73 545 aaKnown RBP19.93■□□□□ 0.78
SMC4-201ENST00000344722 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.93■□□□□ 0.78
SMC4-201ENST00000344722 EDC3Q96F86 508 aaKnown RBP19.93■□□□□ 0.78
SMC4-201ENST00000344722 EPB41L5Q9HCM4 733 aa19.93■□□□□ 0.78
SMC4-201ENST00000344722 BCAP29Q9UHQ4 241 aa19.93■□□□□ 0.78
SMC4-201ENST00000344722 C2orf54Q08AI8 447 aa19.92■□□□□ 0.78
SMC4-201ENST00000344722 DYMQ7RTS9 669 aa19.92■□□□□ 0.78
SMC4-201ENST00000344722 SNX29Q8TEQ0 813 aa19.92■□□□□ 0.78
SMC4-201ENST00000344722 COMMD10Q9Y6G5 202 aa19.92■□□□□ 0.78
SMC4-201ENST00000344722 EEF1GP26641 437 aaKnown RBP19.92■□□□□ 0.78
SMC4-201ENST00000344722 ACRBPQ8NEB7 543 aa19.92■□□□□ 0.78
SMC4-201ENST00000344722 RABGAP1Q9Y3P9 1069 aa19.92■□□□□ 0.78
SMC4-201ENST00000344722 MRPL12P52815 198 aaKnown RBP19.92■□□□□ 0.78
SMC4-201ENST00000344722 CCDC13Q8IYE1 715 aa19.92■□□□□ 0.78
SMC4-201ENST00000344722 HMGB1P1B2RPK0 211 aaPredicted RBP19.92■□□□□ 0.78
SMC4-201ENST00000344722 LARGE1O95461 756 aa19.92■□□□□ 0.78
SMC4-201ENST00000344722 SLMAPQ14BN4 828 aa19.92■□□□□ 0.78
SMC4-201ENST00000344722 LGSNQ5TDP6 509 aa19.92■□□□□ 0.78
SMC4-201ENST00000344722 EMBQ6PCB8 327 aa19.92■□□□□ 0.78
SMC4-201ENST00000344722 HELBQ8NG08 1087 aaPredicted RBP19.92■□□□□ 0.78
SMC4-201ENST00000344722 BPIFA3Q9BQP9 254 aa19.92■□□□□ 0.78
SMC4-201ENST00000344722 A0A087WWV3 80 aa19.91■□□□□ 0.78
SMC4-201ENST00000344722 OPHN1O60890 802 aa19.91■□□□□ 0.78
SMC4-201ENST00000344722 HERC4Q5GLZ8 1057 aaPredicted RBP19.91■□□□□ 0.78
SMC4-201ENST00000344722 VCX3AQ9NNX9 186 aa19.91■□□□□ 0.78
SMC4-201ENST00000344722 ST5P78524 1137 aa19.91■□□□□ 0.78
SMC4-201ENST00000344722 WHAMMQ8TF30 809 aa19.91■□□□□ 0.78
SMC4-201ENST00000344722 LRRC59Q96AG4 307 aaKnown RBP19.91■□□□□ 0.78
SMC4-201ENST00000344722 HINFPQ9BQA5 517 aa19.91■□□□□ 0.78
SMC4-201ENST00000344722 MAN1B1Q9UKM7 699 aa19.91■□□□□ 0.78
SMC4-201ENST00000344722 TRPC3Q13507 836 aa19.91■□□□□ 0.78
SMC4-201ENST00000344722 KDRP35968 1356 aa19.91■□□□□ 0.78
SMC4-201ENST00000344722 PUM3Q15397 648 aaKnown RBP19.91■□□□□ 0.78
SMC4-201ENST00000344722 MAK16Q9BXY0 300 aaKnown RBP19.91■□□□□ 0.78
SMC4-201ENST00000344722 BCRP11274 1271 aa19.9■□□□□ 0.78
SMC4-201ENST00000344722 CCDC144BQ3MJ40 725 aa19.9■□□□□ 0.78
SMC4-201ENST00000344722 AKNAD1Q5T1N1 836 aa19.9■□□□□ 0.78
SMC4-201ENST00000344722 DCAF5Q96JK2 942 aa19.9■□□□□ 0.78
SMC4-201ENST00000344722 DDX23Q9BUQ8 820 aaKnown RBP19.9■□□□□ 0.78
SMC4-201ENST00000344722 AGTPBP1Q9UPW5 1226 aa19.9■□□□□ 0.78
SMC4-201ENST00000344722 KRT5P13647 590 aa19.9■□□□□ 0.78
SMC4-201ENST00000344722 PLCG2P16885 1265 aa19.9■□□□□ 0.78
SMC4-201ENST00000344722 ADD1P35611 737 aaKnown RBP19.9■□□□□ 0.78
SMC4-201ENST00000344722 SRLQ86TD4 932 aa19.9■□□□□ 0.78
SMC4-201ENST00000344722 U2AF1L4Q8WU68 220 aaKnown RBP19.9■□□□□ 0.78
SMC4-201ENST00000344722 ZDHHC9Q9Y397 364 aa19.9■□□□□ 0.78
SMC4-201ENST00000344722 ZCRB1Q8TBF4 217 aaKnown RBP19.9■□□□□ 0.78
SMC4-201ENST00000344722 GRK7Q8WTQ7 553 aa19.9■□□□□ 0.78
SMC4-201ENST00000344722 RUNDC3BQ96NL0 473 aa19.9■□□□□ 0.78
SMC4-201ENST00000344722 PTCH1Q13635 1447 aa19.9■□□□□ 0.78
SMC4-201ENST00000344722 TBC1D8O95759 1140 aa19.9■□□□□ 0.78
SMC4-201ENST00000344722 Q9H521 79 aa19.9■□□□□ 0.78
SMC4-201ENST00000344722 NCAPH2Q6IBW4 605 aa19.89■□□□□ 0.78
SMC4-201ENST00000344722 SYMPKQ92797 1274 aaKnown RBP19.89■□□□□ 0.78
SMC4-201ENST00000344722 EIF4A1P60842 406 aaKnown RBP19.89■□□□□ 0.77
SMC4-201ENST00000344722 IP6K1Q92551 441 aa19.89■□□□□ 0.77
SMC4-201ENST00000344722 KLHL29Q96CT2 875 aa19.89■□□□□ 0.77
SMC4-201ENST00000344722 SESN3P58005 492 aa19.89■□□□□ 0.77
SMC4-201ENST00000344722 USP27XA6NNY8 438 aa19.89■□□□□ 0.77
SMC4-201ENST00000344722 BTBD18B2RXH4 712 aa19.89■□□□□ 0.77
SMC4-201ENST00000344722 NBPF9Q3BBW0 867 aa19.89■□□□□ 0.77
SMC4-201ENST00000344722 ZNF654Q8IZM8 581 aa19.89■□□□□ 0.77
SMC4-201ENST00000344722 LZTS2Q9BRK4 669 aa19.89■□□□□ 0.77
SMC4-201ENST00000344722 NUF2Q9BZD4 464 aa19.89■□□□□ 0.77
SMC4-201ENST00000344722 VPS37BQ9H9H4 285 aa19.89■□□□□ 0.77
SMC4-201ENST00000344722 TYW1Q9NV66 732 aaKnown RBP19.89■□□□□ 0.77
SMC4-201ENST00000344722 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.89■□□□□ 0.77
SMC4-201ENST00000344722 ZAP70P43403 619 aa19.89■□□□□ 0.77
SMC4-201ENST00000344722 TAF11Q15544 211 aa19.89■□□□□ 0.77
SMC4-201ENST00000344722 DENND2AQ9ULE3 1009 aa19.89■□□□□ 0.77
SMC4-201ENST00000344722 ZNF532Q9HCE3 1301 aa19.88■□□□□ 0.77
SMC4-201ENST00000344722 WDR7Q9Y4E6 1490 aa19.88■□□□□ 0.77
SMC4-201ENST00000344722 HIBCHQ6NVY1 386 aaPredicted RBP19.88■□□□□ 0.77
SMC4-201ENST00000344722 DDX27Q96GQ7 796 aaKnown RBP19.88■□□□□ 0.77
SMC4-201ENST00000344722 FTOQ9C0B1 505 aaKnown RBP eCLIP19.88■□□□□ 0.77
SMC4-201ENST00000344722 EHHADHQ08426 723 aa19.88■□□□□ 0.77
SMC4-201ENST00000344722 ZNF790Q6PG37 636 aa19.88■□□□□ 0.77
SMC4-201ENST00000344722 GBP7Q8N8V2 638 aaPredicted RBP19.88■□□□□ 0.77
SMC4-201ENST00000344722 CTIFO43310 598 aaKnown RBP19.88■□□□□ 0.77
SMC4-201ENST00000344722 CYP2E1P05181 493 aaPredicted RBP19.88■□□□□ 0.77
SMC4-201ENST00000344722 STAT1P42224 750 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms