RNA–Protein interactions for RNA: ENST00000344622.8

GDNF-202, Transcript of glial cell derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene GDNF, Length 3,655 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDNF-202ENST00000344622 ZNF408Q9H9D4 720 aa8.54□□□□□ -1.04
GDNF-202ENST00000344622 HERC5Q9UII4 1024 aaKnown RBP8.54□□□□□ -1.04
GDNF-202ENST00000344622 MYO15AQ9UKN7 3530 aa8.54□□□□□ -1.04
GDNF-202ENST00000344622 ZC3H4Q9UPT8 1303 aaKnown RBP8.54□□□□□ -1.04
GDNF-202ENST00000344622 TRIM75PA6NK02 468 aa8.53□□□□□ -1.04
GDNF-202ENST00000344622 TTLL1O95922 423 aa8.53□□□□□ -1.04
GDNF-202ENST00000344622 ICA1Q05084 483 aa8.53□□□□□ -1.04
GDNF-202ENST00000344622 TMTC3Q6ZXV5 915 aa8.53□□□□□ -1.04
GDNF-202ENST00000344622 TBC1D5Q92609 795 aa8.53□□□□□ -1.04
GDNF-202ENST00000344622 PURBQ96QR8 312 aaKnown RBP8.53□□□□□ -1.04
GDNF-202ENST00000344622 AFG3L2Q9Y4W6 797 aa8.53□□□□□ -1.04
GDNF-202ENST00000344622 MRVI1Q9Y6F6 885 aa8.53□□□□□ -1.04
GDNF-202ENST00000344622 MCM3APO60318 1980 aa8.53□□□□□ -1.04
GDNF-202ENST00000344622 USP17L10C9JJH3 530 aa8.53□□□□□ -1.04
GDNF-202ENST00000344622 NR5A1Q13285 461 aa8.53□□□□□ -1.04
GDNF-202ENST00000344622 ZNF341Q9BYN7 854 aa8.53□□□□□ -1.04
GDNF-202ENST00000344622 GPCPD1Q9NPB8 672 aa8.53□□□□□ -1.04
GDNF-202ENST00000344622 SWAP70Q9UH65 585 aa8.53□□□□□ -1.04
GDNF-202ENST00000344622 ZNFX1Q9P2E3 1918 aaKnown RBP8.53□□□□□ -1.04
GDNF-202ENST00000344622 PASKQ96RG2 1323 aa8.53□□□□□ -1.04
GDNF-202ENST00000344622 RBBP6Q7Z6E9 1792 aaKnown RBP8.53□□□□□ -1.04
GDNF-202ENST00000344622 HLA-DOAP06340 250 aa8.53□□□□□ -1.04
GDNF-202ENST00000344622 LMOD1P29536 600 aaPredicted RBP8.53□□□□□ -1.04
GDNF-202ENST00000344622 PTPN18Q99952 460 aa8.53□□□□□ -1.04
GDNF-202ENST00000344622 JMJD4Q9H9V9 463 aa8.53□□□□□ -1.04
GDNF-202ENST00000344622 VPS54Q9P1Q0 977 aa8.53□□□□□ -1.04
GDNF-202ENST00000344622 V9GY48 417 aaPredicted RBP8.53□□□□□ -1.04
GDNF-202ENST00000344622 ZNF536O15090 1300 aa8.53□□□□□ -1.04
GDNF-202ENST00000344622 SPP2Q13103 211 aa8.52□□□□□ -1.04
GDNF-202ENST00000344622 FAM83BQ5T0W9 1011 aa8.52□□□□□ -1.04
GDNF-202ENST00000344622 NFXL1Q6ZNB6 911 aa8.52□□□□□ -1.04
GDNF-202ENST00000344622 IQCA1Q86XH1 822 aa8.52□□□□□ -1.04
GDNF-202ENST00000344622 ADGRF4Q8IZF3 695 aa8.52□□□□□ -1.04
GDNF-202ENST00000344622 RASGRP4Q8TDF6 673 aa8.52□□□□□ -1.04
GDNF-202ENST00000344622 ELP3Q9H9T3 547 aa8.52□□□□□ -1.04
GDNF-202ENST00000344622 ZHX2Q9Y6X8 837 aa8.52□□□□□ -1.04
GDNF-202ENST00000344622 GOLGA8AA7E2F4 631 aa8.52□□□□□ -1.05
GDNF-202ENST00000344622 M0R2N6 131 aa8.52□□□□□ -1.05
GDNF-202ENST00000344622 BRD1O95696 1058 aa8.52□□□□□ -1.05
GDNF-202ENST00000344622 FGD1P98174 961 aa8.52□□□□□ -1.05
GDNF-202ENST00000344622 GRM4Q14833 912 aa8.52□□□□□ -1.05
GDNF-202ENST00000344622 CERS3Q8IU89 383 aa8.52□□□□□ -1.05
GDNF-202ENST00000344622 ZNF784Q8NCA9 323 aaPredicted RBP8.52□□□□□ -1.05
GDNF-202ENST00000344622 PIGSQ96S52 555 aa8.52□□□□□ -1.05
GDNF-202ENST00000344622 VAT1LQ9HCJ6 419 aa8.52□□□□□ -1.05
GDNF-202ENST00000344622 TMX2Q9Y320 296 aa8.52□□□□□ -1.05
GDNF-202ENST00000344622 RIPK3Q9Y572 518 aa8.52□□□□□ -1.05
GDNF-202ENST00000344622 CHD9Q3L8U1 2897 aa8.52□□□□□ -1.05
GDNF-202ENST00000344622 CCDC69A6NI79 296 aa8.52□□□□□ -1.05
GDNF-202ENST00000344622 RAD21O60216 631 aa8.52□□□□□ -1.05
GDNF-202ENST00000344622 HMGCS2P54868 508 aa8.52□□□□□ -1.05
GDNF-202ENST00000344622 ZNF543Q08ER8 600 aa8.52□□□□□ -1.05
GDNF-202ENST00000344622 WWC2Q6AWC2 1192 aa8.52□□□□□ -1.05
GDNF-202ENST00000344622 TMEM179Q6ZVK1 233 aa8.52□□□□□ -1.05
GDNF-202ENST00000344622 APOBEC3FQ8IUX4 373 aaKnown RBP8.52□□□□□ -1.05
GDNF-202ENST00000344622 DCPSQ96C86 337 aaKnown RBP8.52□□□□□ -1.05
GDNF-202ENST00000344622 INTS4Q96HW7 963 aaKnown RBP8.52□□□□□ -1.05
GDNF-202ENST00000344622 SLC26A6Q9BXS9 759 aa8.52□□□□□ -1.05
GDNF-202ENST00000344622 CHMP5Q9NZZ3 219 aa8.52□□□□□ -1.05
GDNF-202ENST00000344622 KLRF2D3W0D1 207 aa8.51□□□□□ -1.05
GDNF-202ENST00000344622 PCP11498 1178 aaKnown RBP8.51□□□□□ -1.05
GDNF-202ENST00000344622 COA7Q96BR5 231 aa8.51□□□□□ -1.05
GDNF-202ENST00000344622 IFNAR1P17181 557 aa8.51□□□□□ -1.05
GDNF-202ENST00000344622 VCAM1P19320 739 aa8.51□□□□□ -1.05
GDNF-202ENST00000344622 TOB1P50616 345 aaPredicted RBP8.51□□□□□ -1.05
GDNF-202ENST00000344622 SULF1Q8IWU6 871 aa8.51□□□□□ -1.05
GDNF-202ENST00000344622 MS4A4AQ96JQ5 239 aa8.51□□□□□ -1.05
GDNF-202ENST00000344622 CLEC11AQ9Y240 323 aa8.51□□□□□ -1.05
GDNF-202ENST00000344622 KIAA1217Q5T5P2 1943 aa8.51□□□□□ -1.05
GDNF-202ENST00000344622 CTNND1O60716 968 aaKnown RBP8.51□□□□□ -1.05
GDNF-202ENST00000344622 FMNL1O95466 1100 aaPredicted RBP8.51□□□□□ -1.05
GDNF-202ENST00000344622 RTN1Q16799 776 aa8.51□□□□□ -1.05
GDNF-202ENST00000344622 LDLRAD1Q5T700 205 aa8.51□□□□□ -1.05
GDNF-202ENST00000344622 SCYL3Q8IZE3 742 aa8.51□□□□□ -1.05
GDNF-202ENST00000344622 ZC3H15Q8WU90 426 aaKnown RBP8.51□□□□□ -1.05
GDNF-202ENST00000344622 TNFRSF25Q93038 417 aa8.51□□□□□ -1.05
GDNF-202ENST00000344622 PGBD1Q96JS3 809 aa8.51□□□□□ -1.05
GDNF-202ENST00000344622 RIOX1Q9H6W3 641 aa8.51□□□□□ -1.05
GDNF-202ENST00000344622 KAT14Q9H8E8 782 aa8.51□□□□□ -1.05
GDNF-202ENST00000344622 TMOD2Q9NZR1 351 aa8.51□□□□□ -1.05
GDNF-202ENST00000344622 NYAP2Q9P242 653 aa8.51□□□□□ -1.05
GDNF-202ENST00000344622 PLXNB2O15031 1838 aa8.51□□□□□ -1.05
GDNF-202ENST00000344622 TOP1P11387 765 aaKnown RBP8.5□□□□□ -1.05
GDNF-202ENST00000344622 MCTP1Q6DN14 999 aa8.5□□□□□ -1.05
GDNF-202ENST00000344622 SLC30A10Q6XR72 485 aa8.5□□□□□ -1.05
GDNF-202ENST00000344622 HOMER1Q86YM7 354 aa8.5□□□□□ -1.05
GDNF-202ENST00000344622 MTMR8Q96EF0 704 aa8.5□□□□□ -1.05
GDNF-202ENST00000344622 OTUD5Q96G74 571 aa8.5□□□□□ -1.05
GDNF-202ENST00000344622 KANSL2Q9H9L4 492 aa8.5□□□□□ -1.05
GDNF-202ENST00000344622 WDR81Q562E7 1941 aa8.5□□□□□ -1.05
GDNF-202ENST00000344622 GJA10Q969M2 543 aa8.5□□□□□ -1.05
GDNF-202ENST00000344622 TXNRD2Q9NNW7 524 aa8.5□□□□□ -1.05
GDNF-202ENST00000344622 ASTN1O14525 1302 aa8.5□□□□□ -1.05
GDNF-202ENST00000344622 BTBD18B2RXH4 712 aa8.5□□□□□ -1.05
GDNF-202ENST00000344622 CELF2O95319 508 aaKnown RBP8.5□□□□□ -1.05
GDNF-202ENST00000344622 GRIN1Q05586 938 aa8.5□□□□□ -1.05
GDNF-202ENST00000344622 TNFAIP1Q13829 316 aa8.5□□□□□ -1.05
GDNF-202ENST00000344622 MAP3K11Q16584 847 aa8.5□□□□□ -1.05
GDNF-202ENST00000344622 GPAT2Q6NUI2 795 aa8.5□□□□□ -1.05
GDNF-202ENST00000344622 ZFP91Q96JP5 570 aaPredicted RBP8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms