RNA–Protein interactions for RNA: ENST00000343017.11

SNX18-202, Transcript of sorting nexin 18, humanhuman

BASIC

Gene SNX18, Length 3,140 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18-202ENST00000343017 HAUS4Q9H6D7 363 aa17.11■□□□□ 0.33
SNX18-202ENST00000343017 SLAIN2Q9P270 581 aa17.11■□□□□ 0.33
SNX18-202ENST00000343017 LIMA1Q9UHB6 759 aaKnown RBP17.11■□□□□ 0.33
SNX18-202ENST00000343017 IDEP14735 1019 aa17.1■□□□□ 0.33
SNX18-202ENST00000343017 MCM3P25205 808 aa17.1■□□□□ 0.33
SNX18-202ENST00000343017 CXCR5P32302 372 aa17.1■□□□□ 0.33
SNX18-202ENST00000343017 OTUD6BQ8N6M0 293 aa17.1■□□□□ 0.33
SNX18-202ENST00000343017 GDAQ9Y2T3 454 aa17.1■□□□□ 0.33
SNX18-202ENST00000343017 MST1RQ04912 1400 aa17.1■□□□□ 0.33
SNX18-202ENST00000343017 TARSL2A2RTX5 802 aaKnown RBP17.1■□□□□ 0.33
SNX18-202ENST00000343017 PRDM1O75626 825 aa17.1■□□□□ 0.33
SNX18-202ENST00000343017 MCAMP43121 646 aa17.1■□□□□ 0.33
SNX18-202ENST00000343017 FNTAP49354 379 aa17.1■□□□□ 0.33
SNX18-202ENST00000343017 SH3RF1Q7Z6J0 888 aa17.1■□□□□ 0.33
SNX18-202ENST00000343017 CNPY4Q8N129 248 aa17.1■□□□□ 0.33
SNX18-202ENST00000343017 OR8K1Q8NGG5 319 aa17.1■□□□□ 0.33
SNX18-202ENST00000343017 CWC25Q9NXE8 425 aaPredicted RBP17.1■□□□□ 0.33
SNX18-202ENST00000343017 NBPF26B4DH59 902 aa17.1■□□□□ 0.33
SNX18-202ENST00000343017 NBPF10Q6P3W6 841 aaKnown RBP17.1■□□□□ 0.33
SNX18-202ENST00000343017 NBPF15Q8N660 670 aa17.1■□□□□ 0.33
SNX18-202ENST00000343017 NELFBQ8WX92 580 aa17.1■□□□□ 0.33
SNX18-202ENST00000343017 SH3GL2Q99962 352 aa17.1■□□□□ 0.33
SNX18-202ENST00000343017 FAM184BQ9ULE4 1060 aa17.1■□□□□ 0.33
SNX18-202ENST00000343017 WDR19Q8NEZ3 1342 aa17.09■□□□□ 0.33
SNX18-202ENST00000343017 KRT14P02533 472 aa17.09■□□□□ 0.33
SNX18-202ENST00000343017 IFNAR1P17181 557 aa17.09■□□□□ 0.33
SNX18-202ENST00000343017 KLK7P49862 253 aa17.09■□□□□ 0.33
SNX18-202ENST00000343017 PRPF38AQ8NAV1 312 aaKnown RBP17.09■□□□□ 0.33
SNX18-202ENST00000343017 AGPAT5Q9NUQ2 364 aa17.09■□□□□ 0.33
SNX18-202ENST00000343017 LUC7L2Q9Y383 392 aaKnown RBP17.09■□□□□ 0.33
SNX18-202ENST00000343017 C5P01031 1676 aa17.09■□□□□ 0.33
SNX18-202ENST00000343017 ECM2O94769 699 aaPredicted RBP17.09■□□□□ 0.33
SNX18-202ENST00000343017 APBA1Q02410 837 aa17.09■□□□□ 0.33
SNX18-202ENST00000343017 GSDMAQ96QA5 445 aa17.09■□□□□ 0.33
SNX18-202ENST00000343017 FOXP1Q9H334 677 aaPredicted RBP17.09■□□□□ 0.33
SNX18-202ENST00000343017 CENPHQ9H3R5 247 aa17.09■□□□□ 0.33
SNX18-202ENST00000343017 PIH1D3Q9NQM4 214 aaKnown RBP17.09■□□□□ 0.33
SNX18-202ENST00000343017 LRRC10BA6NIK2 292 aa17.08■□□□□ 0.33
SNX18-202ENST00000343017 GUCY1A3Q02108 690 aa17.08■□□□□ 0.33
SNX18-202ENST00000343017 RNF187Q5TA31 235 aaPredicted RBP17.08■□□□□ 0.33
SNX18-202ENST00000343017 TMEM87BQ96K49 555 aa17.08■□□□□ 0.33
SNX18-202ENST00000343017 MTRQ99707 1265 aa17.08■□□□□ 0.33
SNX18-202ENST00000343017 XDHP47989 1333 aa17.08■□□□□ 0.33
SNX18-202ENST00000343017 SCP2P22307 547 aa17.08■□□□□ 0.32
SNX18-202ENST00000343017 KRT26Q7Z3Y9 468 aa17.08■□□□□ 0.32
SNX18-202ENST00000343017 POTEDQ86YR6 584 aa17.08■□□□□ 0.32
SNX18-202ENST00000343017 TRIM22Q8IYM9 498 aa17.08■□□□□ 0.32
SNX18-202ENST00000343017 CABS1Q96KC9 395 aa17.08■□□□□ 0.32
SNX18-202ENST00000343017 DONSONQ9NYP3 566 aa17.08■□□□□ 0.32
SNX18-202ENST00000343017 ZNF330Q9Y3S2 320 aaPredicted RBP17.08■□□□□ 0.32
SNX18-202ENST00000343017 AFDNP55196 1824 aaKnown RBP17.08■□□□□ 0.32
SNX18-202ENST00000343017 TRIM75PA6NK02 468 aa17.07■□□□□ 0.32
SNX18-202ENST00000343017 SEC24CP53992 1094 aa17.07■□□□□ 0.32
SNX18-202ENST00000343017 EVA1CP58658 441 aa17.07■□□□□ 0.32
SNX18-202ENST00000343017 ACTN3Q08043 901 aaPredicted RBP17.07■□□□□ 0.32
SNX18-202ENST00000343017 RTN1Q16799 776 aa17.07■□□□□ 0.32
SNX18-202ENST00000343017 GBP6Q6ZN66 633 aa17.07■□□□□ 0.32
SNX18-202ENST00000343017 SGMS1Q86VZ5 419 aa17.07■□□□□ 0.32
SNX18-202ENST00000343017 IRF2BP1Q8IU81 584 aa17.07■□□□□ 0.32
SNX18-202ENST00000343017 ZNF532Q9HCE3 1301 aa17.07■□□□□ 0.32
SNX18-202ENST00000343017 SEMA3EO15041 775 aa17.07■□□□□ 0.32
SNX18-202ENST00000343017 ADD2P35612 726 aa17.07■□□□□ 0.32
SNX18-202ENST00000343017 CKAP4Q07065 602 aaKnown RBP17.07■□□□□ 0.32
SNX18-202ENST00000343017 CCDC57Q2TAC2 916 aa17.07■□□□□ 0.32
SNX18-202ENST00000343017 AATFQ9NY61 560 aaKnown RBP eCLIP17.07■□□□□ 0.32
SNX18-202ENST00000343017 MAP3K15Q6ZN16 1313 aa17.07■□□□□ 0.32
SNX18-202ENST00000343017 KIAA0754O94854 1291 aa17.07■□□□□ 0.32
SNX18-202ENST00000343017 PMS1P54277 932 aaKnown RBP17.07■□□□□ 0.32
SNX18-202ENST00000343017 PAK1Q13153 545 aa17.07■□□□□ 0.32
SNX18-202ENST00000343017 TCIRG1Q13488 830 aa17.07■□□□□ 0.32
SNX18-202ENST00000343017 CRACR2BQ8N4Y2 399 aaPredicted RBP17.07■□□□□ 0.32
SNX18-202ENST00000343017 KDM6AO15550 1401 aaPredicted RBP17.06■□□□□ 0.32
SNX18-202ENST00000343017 KCTD19Q17RG1 926 aaPredicted RBP17.06■□□□□ 0.32
SNX18-202ENST00000343017 PARP1P09874 1014 aaKnown RBP17.06■□□□□ 0.32
SNX18-202ENST00000343017 USP8P40818 1118 aa17.06■□□□□ 0.32
SNX18-202ENST00000343017 PRCPP42785 496 aa17.06■□□□□ 0.32
SNX18-202ENST00000343017 CREG2Q8IUH2 290 aa17.06■□□□□ 0.32
SNX18-202ENST00000343017 SYNE4Q8N205 404 aa17.06■□□□□ 0.32
SNX18-202ENST00000343017 RNPC3Q96LT9 517 aaKnown RBP17.06■□□□□ 0.32
SNX18-202ENST00000343017 CEP131Q9UPN4 1083 aa17.06■□□□□ 0.32
SNX18-202ENST00000343017 SPATA31A3Q5VYP0 1347 aa17.05■□□□□ 0.32
SNX18-202ENST00000343017 CCDC196A0A1B0GTZ2 297 aa17.05■□□□□ 0.32
SNX18-202ENST00000343017 TSR1Q2NL82 804 aaKnown RBP17.05■□□□□ 0.32
SNX18-202ENST00000343017 MB21D1Q8N884 522 aa17.05■□□□□ 0.32
SNX18-202ENST00000343017 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.05■□□□□ 0.32
SNX18-202ENST00000343017 WASF1Q92558 559 aa17.05■□□□□ 0.32
SNX18-202ENST00000343017 MLXIPQ9HAP2 919 aa17.05■□□□□ 0.32
SNX18-202ENST00000343017 MEFVO15553 781 aaPredicted RBP17.05■□□□□ 0.32
SNX18-202ENST00000343017 KRT86O43790 486 aa17.05■□□□□ 0.32
SNX18-202ENST00000343017 GPTP24298 496 aa17.05■□□□□ 0.32
SNX18-202ENST00000343017 ZKSCAN4Q969J2 545 aaPredicted RBP17.05■□□□□ 0.32
SNX18-202ENST00000343017 ZIM3Q96PE6 472 aa17.05■□□□□ 0.32
SNX18-202ENST00000343017 GOLGA8KD6RF30 607 aa17.05■□□□□ 0.32
SNX18-202ENST00000343017 CYP27B1O15528 508 aa17.05■□□□□ 0.32
SNX18-202ENST00000343017 PRKAB2O43741 272 aa17.05■□□□□ 0.32
SNX18-202ENST00000343017 PLEKP08567 350 aaPredicted RBP17.05■□□□□ 0.32
SNX18-202ENST00000343017 PHKG2P15735 406 aa17.05■□□□□ 0.32
SNX18-202ENST00000343017 NNTQ13423 1086 aa17.05■□□□□ 0.32
SNX18-202ENST00000343017 RUFY1Q96T51 708 aa17.05■□□□□ 0.32
SNX18-202ENST00000343017 EPB41L4AQ9HCS5 686 aaPredicted RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms